RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 KDM4FA0A1W2PPD8 638 aa8.47□□□□□ -1.05
TRAV15-201ENST00000556680 TSR1Q2NL82 804 aaKnown RBP8.47□□□□□ -1.05
TRAV15-201ENST00000556680 KHSRPQ92945 711 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRAV15-201ENST00000556680 ZSWIM6Q9HCJ5 1215 aa8.47□□□□□ -1.05
TRAV15-201ENST00000556680 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
TRAV15-201ENST00000556680 HOXB3P14651 431 aaPredicted RBP8.46□□□□□ -1.06
TRAV15-201ENST00000556680 FOSBP53539 338 aa8.46□□□□□ -1.06
TRAV15-201ENST00000556680 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.06
TRAV15-201ENST00000556680 ZDHHC16Q969W1 377 aa8.46□□□□□ -1.06
TRAV15-201ENST00000556680 C6orf132Q5T0Z8 1188 aa8.45□□□□□ -1.06
TRAV15-201ENST00000556680 TTLL12Q14166 644 aaPredicted RBP8.44□□□□□ -1.06
TRAV15-201ENST00000556680 AMHR2Q16671 573 aa8.44□□□□□ -1.06
TRAV15-201ENST00000556680 GPR153Q6NV75 609 aa8.44□□□□□ -1.06
TRAV15-201ENST00000556680 CERKQ8TCT0 537 aa8.44□□□□□ -1.06
TRAV15-201ENST00000556680 SNPHO15079 494 aa8.43□□□□□ -1.06
TRAV15-201ENST00000556680 PARP9Q8IXQ6 854 aa8.41□□□□□ -1.06
TRAV15-201ENST00000556680 LHX6Q9UPM6 363 aa8.41□□□□□ -1.06
TRAV15-201ENST00000556680 DDRGK1Q96HY6 314 aa8.4□□□□□ -1.06
TRAV15-201ENST00000556680 ADAM33Q9BZ11 813 aa8.4□□□□□ -1.06
TRAV15-201ENST00000556680 FAM117AQ9C073 453 aa8.4□□□□□ -1.06
TRAV15-201ENST00000556680 TIMELESSQ9UNS1 1208 aa8.4□□□□□ -1.06
TRAV15-201ENST00000556680 PSDA5PKW4 1024 aaPredicted RBP8.39□□□□□ -1.07
TRAV15-201ENST00000556680 OATP04181 439 aa8.39□□□□□ -1.07
TRAV15-201ENST00000556680 PPP4R3BQ5MIZ7 849 aa8.39□□□□□ -1.07
TRAV15-201ENST00000556680 C14orf37Q86TY3 774 aa8.39□□□□□ -1.07
TRAV15-201ENST00000556680 CLCN1P35523 988 aa8.37□□□□□ -1.07
TRAV15-201ENST00000556680 PADI6Q6TGC4 694 aa8.37□□□□□ -1.07
TRAV15-201ENST00000556680 PRSS12P56730 875 aa8.36□□□□□ -1.07
TRAV15-201ENST00000556680 MDM2Q00987 491 aaPredicted RBP8.36□□□□□ -1.07
TRAV15-201ENST00000556680 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
TRAV15-201ENST00000556680 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
TRAV15-201ENST00000556680 CDCA7LQ96GN5 454 aa8.35□□□□□ -1.07
TRAV15-201ENST00000556680 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
TRAV15-201ENST00000556680 HOXB1P14653 301 aaPredicted RBP8.34□□□□□ -1.07
TRAV15-201ENST00000556680 PTPREP23469 700 aa8.34□□□□□ -1.07
TRAV15-201ENST00000556680 RBM27Q9P2N5 1060 aaKnown RBP8.34□□□□□ -1.07
TRAV15-201ENST00000556680 METTL3Q86U44 580 aaKnown RBP8.33□□□□□ -1.08
TRAV15-201ENST00000556680 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
TRAV15-201ENST00000556680 REPIN1Q9BWE0 567 aaKnown RBP8.33□□□□□ -1.08
TRAV15-201ENST00000556680 BCL2L12Q9HB09 334 aa8.33□□□□□ -1.08
TRAV15-201ENST00000556680 ADGRG1Q9Y653 693 aa8.33□□□□□ -1.08
TRAV15-201ENST00000556680 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
TRAV15-201ENST00000556680 SSTR3P32745 418 aaPredicted RBP8.32□□□□□ -1.08
TRAV15-201ENST00000556680 PHOX2BQ99453 314 aa8.32□□□□□ -1.08
TRAV15-201ENST00000556680 NISCHQ9Y2I1 1504 aa8.32□□□□□ -1.08
TRAV15-201ENST00000556680 MS4A1P11836 297 aa8.31□□□□□ -1.08
TRAV15-201ENST00000556680 TTC13Q8NBP0 860 aa8.31□□□□□ -1.08
TRAV15-201ENST00000556680 PXYLP1Q8TE99 480 aa8.31□□□□□ -1.08
TRAV15-201ENST00000556680 KCNH8Q96L42 1107 aa8.31□□□□□ -1.08
TRAV15-201ENST00000556680 COL9A1P20849 921 aa8.3□□□□□ -1.08
TRAV15-201ENST00000556680 NLRP7Q8WX94 980 aa8.3□□□□□ -1.08
TRAV15-201ENST00000556680 OTUD5Q96G74 571 aa8.3□□□□□ -1.08
TRAV15-201ENST00000556680 PPP1R3GB7ZBB8 358 aa8.29□□□□□ -1.08
TRAV15-201ENST00000556680 TMUB1Q9BVT8 246 aa8.29□□□□□ -1.08
TRAV15-201ENST00000556680 PACS2Q86VP3 889 aa8.28□□□□□ -1.08
TRAV15-201ENST00000556680 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
TRAV15-201ENST00000556680 LHX8Q68G74 356 aa8.27□□□□□ -1.09
TRAV15-201ENST00000556680 PCMTD1Q96MG8 357 aaPredicted RBP8.27□□□□□ -1.09
TRAV15-201ENST00000556680 KCNK17Q96T54 332 aa8.27□□□□□ -1.09
TRAV15-201ENST00000556680 BEGAINQ9BUH8 593 aa8.27□□□□□ -1.09
TRAV15-201ENST00000556680 RSPH6AQ9H0K4 717 aa8.26□□□□□ -1.09
TRAV15-201ENST00000556680 GOPCQ9HD26 462 aa8.26□□□□□ -1.09
TRAV15-201ENST00000556680 FAM217BQ9NTX9 383 aaPredicted RBP8.26□□□□□ -1.09
TRAV15-201ENST00000556680 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
TRAV15-201ENST00000556680 ERBB3P21860 1342 aa8.26□□□□□ -1.09
TRAV15-201ENST00000556680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.25□□□□□ -1.09
TRAV15-201ENST00000556680 NUDT18Q6ZVK8 323 aa8.25□□□□□ -1.09
TRAV15-201ENST00000556680 FAM198AQ9UFP1 575 aa8.25□□□□□ -1.09
TRAV15-201ENST00000556680 PNMA3Q9UL41 463 aa8.25□□□□□ -1.09
TRAV15-201ENST00000556680 RCCD1A6NED2 376 aa8.24□□□□□ -1.09
TRAV15-201ENST00000556680 TRIM6-TRIM34B2RNG4 842 aa8.24□□□□□ -1.09
TRAV15-201ENST00000556680 NBPF26B4DH59 902 aa8.24□□□□□ -1.09
TRAV15-201ENST00000556680 TATDN2Q93075 761 aa8.24□□□□□ -1.09
TRAV15-201ENST00000556680 EYA1Q99502 592 aa8.23□□□□□ -1.09
TRAV15-201ENST00000556680 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
TRAV15-201ENST00000556680 DNAJB2P25686 324 aa8.21□□□□□ -1.1
TRAV15-201ENST00000556680 SKIV2LQ15477 1246 aaKnown RBP8.21□□□□□ -1.1
TRAV15-201ENST00000556680 PROX2Q3B8N5 592 aa8.21□□□□□ -1.1
TRAV15-201ENST00000556680 SH3D19Q5HYK7 790 aa8.21□□□□□ -1.1
TRAV15-201ENST00000556680 VARS2Q5ST30 1063 aaKnown RBP8.21□□□□□ -1.1
TRAV15-201ENST00000556680 SMAPO00193 183 aa8.2□□□□□ -1.1
TRAV15-201ENST00000556680 ARHGAP33O14559 1287 aa8.2□□□□□ -1.1
TRAV15-201ENST00000556680 PSEN2P49810 448 aa8.2□□□□□ -1.1
TRAV15-201ENST00000556680 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
TRAV15-201ENST00000556680 POLR3EQ9NVU0 708 aa8.2□□□□□ -1.1
TRAV15-201ENST00000556680 KIAA1468Q9P260 1216 aa8.2□□□□□ -1.1
TRAV15-201ENST00000556680 DDX11L8A8MPP1 907 aa8.19□□□□□ -1.1
TRAV15-201ENST00000556680 DIXDC1Q155Q3 683 aa8.19□□□□□ -1.1
TRAV15-201ENST00000556680 C3orf80F5H4A9 247 aa8.18□□□□□ -1.1
TRAV15-201ENST00000556680 ST18O60284 1047 aa8.18□□□□□ -1.1
TRAV15-201ENST00000556680 EMP3P54852 163 aa8.18□□□□□ -1.1
TRAV15-201ENST00000556680 HDGFP51858 240 aaKnown RBP8.17□□□□□ -1.1
TRAV15-201ENST00000556680 RSPH4AQ5TD94 716 aa8.17□□□□□ -1.1
TRAV15-201ENST00000556680 ZBED2Q9BTP6 218 aa8.17□□□□□ -1.1
TRAV15-201ENST00000556680 TBC1D2Q9BYX2 928 aa8.17□□□□□ -1.1
TRAV15-201ENST00000556680 FLIIQ13045 1269 aa8.16□□□□□ -1.1
TRAV15-201ENST00000556680 MYSM1Q5VVJ2 828 aa8.16□□□□□ -1.1
TRAV15-201ENST00000556680 NUTM1Q86Y26 1132 aa8.16□□□□□ -1.1
TRAV15-201ENST00000556680 MARVELD3Q96A59 401 aa8.16□□□□□ -1.1
TRAV15-201ENST00000556680 FAM163AQ96GL9 167 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms