RNA–Protein interactions for RNA: ENST00000555787.1

PSMC1-206, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 2,246 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-206ENST00000555787 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
PSMC1-206ENST00000555787 OXER1Q8TDS5 423 aa11.55□□□□□ -0.56
PSMC1-206ENST00000555787 FBXO31Q5XUX0 539 aaPredicted RBP11.55□□□□□ -0.56
PSMC1-206ENST00000555787 PDIA6Q15084 440 aa11.54□□□□□ -0.56
PSMC1-206ENST00000555787 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
PSMC1-206ENST00000555787 E9PSI1 815 aa11.53□□□□□ -0.56
PSMC1-206ENST00000555787 SOX12O15370 315 aa11.53□□□□□ -0.56
PSMC1-206ENST00000555787 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
PSMC1-206ENST00000555787 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
PSMC1-206ENST00000555787 SNRKQ9NRH2 765 aa11.52□□□□□ -0.56
PSMC1-206ENST00000555787 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.56
PSMC1-206ENST00000555787 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
PSMC1-206ENST00000555787 GNPATO15228 680 aa11.5□□□□□ -0.57
PSMC1-206ENST00000555787 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
PSMC1-206ENST00000555787 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
PSMC1-206ENST00000555787 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
PSMC1-206ENST00000555787 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
PSMC1-206ENST00000555787 POM121CA8CG34 1229 aa11.47□□□□□ -0.57
PSMC1-206ENST00000555787 DSG2Q14126 1118 aa11.47□□□□□ -0.57
PSMC1-206ENST00000555787 PRIM1P49642 420 aaKnown RBP11.46□□□□□ -0.57
PSMC1-206ENST00000555787 NLRP7Q8WX94 980 aa11.46□□□□□ -0.57
PSMC1-206ENST00000555787 MAP3K13O43283 966 aa11.45□□□□□ -0.58
PSMC1-206ENST00000555787 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
PSMC1-206ENST00000555787 CDK11BP21127 795 aaKnown RBP11.44□□□□□ -0.58
PSMC1-206ENST00000555787 CDK11AQ9UQ88 783 aaPredicted RBP11.44□□□□□ -0.58
PSMC1-206ENST00000555787 PHOX2BQ99453 314 aa11.44□□□□□ -0.58
PSMC1-206ENST00000555787 GDPD2Q9HCC8 539 aa11.44□□□□□ -0.58
PSMC1-206ENST00000555787 DNMBPQ6XZF7 1577 aa11.43□□□□□ -0.58
PSMC1-206ENST00000555787 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.42□□□□□ -0.58
PSMC1-206ENST00000555787 EIF5BO60841 1220 aaKnown RBP11.42□□□□□ -0.58
PSMC1-206ENST00000555787 OSBPP22059 807 aa11.42□□□□□ -0.58
PSMC1-206ENST00000555787 RFX1P22670 979 aa11.42□□□□□ -0.58
PSMC1-206ENST00000555787 UNCXA6NJT0 531 aa11.41□□□□□ -0.58
PSMC1-206ENST00000555787 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
PSMC1-206ENST00000555787 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
PSMC1-206ENST00000555787 TOPBP1Q92547 1522 aa11.41□□□□□ -0.58
PSMC1-206ENST00000555787 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
PSMC1-206ENST00000555787 DDX12PQ92771 950 aa11.4□□□□□ -0.58
PSMC1-206ENST00000555787 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
PSMC1-206ENST00000555787 CALR3Q96L12 384 aaKnown RBP11.39□□□□□ -0.59
PSMC1-206ENST00000555787 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
PSMC1-206ENST00000555787 HIC1Q14526 733 aa11.38□□□□□ -0.59
PSMC1-206ENST00000555787 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
PSMC1-206ENST00000555787 HSP90B1P14625 803 aaKnown RBP11.37□□□□□ -0.59
PSMC1-206ENST00000555787 SKIV2LQ15477 1246 aaKnown RBP11.37□□□□□ -0.59
PSMC1-206ENST00000555787 GLMNQ92990 594 aa11.37□□□□□ -0.59
PSMC1-206ENST00000555787 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
PSMC1-206ENST00000555787 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
PSMC1-206ENST00000555787 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSMC1-206ENST00000555787 FAM161AQ3B820 660 aa11.35□□□□□ -0.59
PSMC1-206ENST00000555787 IVNS1ABPQ9Y6Y0 642 aa11.35□□□□□ -0.59
PSMC1-206ENST00000555787 CHMP4AQ9BY43 222 aa11.34□□□□□ -0.59
PSMC1-206ENST00000555787 SPDYE5A6NIY4 337 aa11.33□□□□□ -0.59
PSMC1-206ENST00000555787 CCDC27Q2M243 656 aa11.33□□□□□ -0.6
PSMC1-206ENST00000555787 FCHSD2O94868 740 aa11.32□□□□□ -0.6
PSMC1-206ENST00000555787 MTMR14Q8NCE2 650 aa11.32□□□□□ -0.6
PSMC1-206ENST00000555787 MYT1LQ9UL68 1186 aa11.32□□□□□ -0.6
PSMC1-206ENST00000555787 FARP1Q9Y4F1 1045 aaPredicted RBP11.32□□□□□ -0.6
PSMC1-206ENST00000555787 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
PSMC1-206ENST00000555787 PTGDRQ13258 359 aa11.32□□□□□ -0.6
PSMC1-206ENST00000555787 PUS7Q96PZ0 661 aaKnown RBP11.32□□□□□ -0.6
PSMC1-206ENST00000555787 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
PSMC1-206ENST00000555787 ABL2P42684 1182 aa11.31□□□□□ -0.6
PSMC1-206ENST00000555787 POLA1P09884 1462 aaPredicted RBP11.31□□□□□ -0.6
PSMC1-206ENST00000555787 UPF1Q92900 1129 aaKnown RBP eCLIP11.3□□□□□ -0.6
PSMC1-206ENST00000555787 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
PSMC1-206ENST00000555787 TARBP1Q13395 1621 aaKnown RBP11.3□□□□□ -0.6
PSMC1-206ENST00000555787 ACIN1Q9UKV3 1341 aaKnown RBP11.3□□□□□ -0.6
PSMC1-206ENST00000555787 CUX1P39880 1505 aa11.3□□□□□ -0.6
PSMC1-206ENST00000555787 RFC5P40937 340 aa11.29□□□□□ -0.6
PSMC1-206ENST00000555787 MYSM1Q5VVJ2 828 aa11.29□□□□□ -0.6
PSMC1-206ENST00000555787 ADAMTS19Q8TE59 1207 aa11.29□□□□□ -0.6
PSMC1-206ENST00000555787 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
PSMC1-206ENST00000555787 TBC1D2BQ9UPU7 963 aa11.29□□□□□ -0.6
PSMC1-206ENST00000555787 FAM177A1Q8N128 213 aaPredicted RBP11.28□□□□□ -0.6
PSMC1-206ENST00000555787 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
PSMC1-206ENST00000555787 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
PSMC1-206ENST00000555787 PPP1R15AO75807 674 aaPredicted RBP11.27□□□□□ -0.61
PSMC1-206ENST00000555787 BRD1O95696 1058 aa11.27□□□□□ -0.61
PSMC1-206ENST00000555787 FGD5Q6ZNL6 1462 aa11.27□□□□□ -0.61
PSMC1-206ENST00000555787 TBC1D12O60347 775 aa11.26□□□□□ -0.61
PSMC1-206ENST00000555787 GPCPD1Q9NPB8 672 aa11.25□□□□□ -0.61
PSMC1-206ENST00000555787 SOGA1O94964 1423 aa11.25□□□□□ -0.61
PSMC1-206ENST00000555787 ZNF608Q9ULD9 1512 aaPredicted RBP11.25□□□□□ -0.61
PSMC1-206ENST00000555787 EIF4G3O43432 1585 aaKnown RBP11.25□□□□□ -0.61
PSMC1-206ENST00000555787 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
PSMC1-206ENST00000555787 BIVM-ERCC5R4GMW8 1640 aa11.24□□□□□ -0.61
PSMC1-206ENST00000555787 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
PSMC1-206ENST00000555787 LIMD1Q9UGP4 676 aa11.23□□□□□ -0.61
PSMC1-206ENST00000555787 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
PSMC1-206ENST00000555787 PBXIP1Q96AQ6 731 aa11.23□□□□□ -0.61
PSMC1-206ENST00000555787 MAP3K9P80192 1104 aa11.22□□□□□ -0.61
PSMC1-206ENST00000555787 KCNA1Q09470 495 aa11.22□□□□□ -0.61
PSMC1-206ENST00000555787 CDCA8Q53HL2 280 aa11.22□□□□□ -0.61
PSMC1-206ENST00000555787 CFAP70Q5T0N1 1121 aa11.21□□□□□ -0.61
PSMC1-206ENST00000555787 SND1Q7KZF4 910 aaKnown RBP eCLIP11.21□□□□□ -0.61
PSMC1-206ENST00000555787 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
PSMC1-206ENST00000555787 RAD54L2Q9Y4B4 1467 aa11.21□□□□□ -0.61
PSMC1-206ENST00000555787 CLCN1P35523 988 aa11.21□□□□□ -0.62
PSMC1-206ENST00000555787 CLK2P49760 499 aaKnown RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms