RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 TSR1Q2NL82 804 aaKnown RBP7.38□□□□□ -1.23
SRP54-209ENST00000555746 KRI1Q8N9T8 703 aaKnown RBP7.38□□□□□ -1.23
SRP54-209ENST00000555746 BRPF1P55201 1214 aaPredicted RBP7.37□□□□□ -1.23
SRP54-209ENST00000555746 C6orf132Q5T0Z8 1188 aa7.37□□□□□ -1.23
SRP54-209ENST00000555746 CERKQ8TCT0 537 aa7.37□□□□□ -1.23
SRP54-209ENST00000555746 RBM33Q96EV2 1170 aaKnown RBP7.37□□□□□ -1.23
SRP54-209ENST00000555746 ADAM33Q9BZ11 813 aa7.37□□□□□ -1.23
SRP54-209ENST00000555746 IRF6O14896 467 aa7.36□□□□□ -1.23
SRP54-209ENST00000555746 FECHP22830 423 aa7.36□□□□□ -1.23
SRP54-209ENST00000555746 PPP4R3BQ5MIZ7 849 aa7.36□□□□□ -1.23
SRP54-209ENST00000555746 TRIM66O15016 1216 aa7.35□□□□□ -1.23
SRP54-209ENST00000555746 BCL2L12Q9HB09 334 aa7.35□□□□□ -1.23
SRP54-209ENST00000555746 CCDC102AQ96A19 550 aa7.34□□□□□ -1.23
SRP54-209ENST00000555746 RBM27Q9P2N5 1060 aaKnown RBP7.34□□□□□ -1.23
SRP54-209ENST00000555746 TTC13Q8NBP0 860 aa7.32□□□□□ -1.24
SRP54-209ENST00000555746 PDE4DQ08499 809 aa7.31□□□□□ -1.24
SRP54-209ENST00000555746 NEUROD2Q15784 382 aa7.31□□□□□ -1.24
SRP54-209ENST00000555746 AMHR2Q16671 573 aa7.31□□□□□ -1.24
SRP54-209ENST00000555746 PPP1R3GB7ZBB8 358 aa7.3□□□□□ -1.24
SRP54-209ENST00000555746 ST18O60284 1047 aa7.3□□□□□ -1.24
SRP54-209ENST00000555746 TMEM132AQ24JP5 1023 aa7.3□□□□□ -1.24
SRP54-209ENST00000555746 PTPREP23469 700 aa7.29□□□□□ -1.24
SRP54-209ENST00000555746 PRSS12P56730 875 aa7.29□□□□□ -1.24
SRP54-209ENST00000555746 COL9A1P20849 921 aa7.28□□□□□ -1.24
SRP54-209ENST00000555746 PADI6Q6TGC4 694 aa7.28□□□□□ -1.24
SRP54-209ENST00000555746 CDCA7LQ96GN5 454 aa7.27□□□□□ -1.25
SRP54-209ENST00000555746 OATP04181 439 aa7.26□□□□□ -1.25
SRP54-209ENST00000555746 KDM4CQ9H3R0 1056 aa7.26□□□□□ -1.25
SRP54-209ENST00000555746 ADGRG1Q9Y653 693 aa7.26□□□□□ -1.25
SRP54-209ENST00000555746 ERBB3P21860 1342 aa7.26□□□□□ -1.25
SRP54-209ENST00000555746 ONECUT3O60422 494 aaPredicted RBP7.25□□□□□ -1.25
SRP54-209ENST00000555746 METTL3Q86U44 580 aaKnown RBP7.25□□□□□ -1.25
SRP54-209ENST00000555746 GPBP1L1Q9HC44 474 aaPredicted RBP7.25□□□□□ -1.25
SRP54-209ENST00000555746 FAM198AQ9UFP1 575 aa7.25□□□□□ -1.25
SRP54-209ENST00000555746 EMP3P54852 163 aa7.24□□□□□ -1.25
SRP54-209ENST00000555746 VARS2Q5ST30 1063 aaKnown RBP7.24□□□□□ -1.25
SRP54-209ENST00000555746 PARP9Q8IXQ6 854 aa7.24□□□□□ -1.25
SRP54-209ENST00000555746 PXYLP1Q8TE99 480 aa7.24□□□□□ -1.25
SRP54-209ENST00000555746 TMUB1Q9BVT8 246 aa7.24□□□□□ -1.25
SRP54-209ENST00000555746 DAXXQ9UER7 740 aaPredicted RBP7.24□□□□□ -1.25
SRP54-209ENST00000555746 TSKSQ9UJT2 592 aa7.24□□□□□ -1.25
SRP54-209ENST00000555746 TRIM6-TRIM34B2RNG4 842 aa7.23□□□□□ -1.25
SRP54-209ENST00000555746 POTEEQ6S8J3 1075 aa7.23□□□□□ -1.25
SRP54-209ENST00000555746 ZNF687Q8N1G0 1237 aa7.23□□□□□ -1.25
SRP54-209ENST00000555746 KCNH8Q96L42 1107 aa7.23□□□□□ -1.25
SRP54-209ENST00000555746 PHOX2BQ99453 314 aa7.23□□□□□ -1.25
SRP54-209ENST00000555746 ARHGAP33O14559 1287 aa7.22□□□□□ -1.25
SRP54-209ENST00000555746 PBX2P40425 430 aa7.22□□□□□ -1.25
SRP54-209ENST00000555746 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
SRP54-209ENST00000555746 MARVELD3Q96A59 401 aa7.22□□□□□ -1.25
SRP54-209ENST00000555746 FAM163AQ96GL9 167 aaPredicted RBP7.22□□□□□ -1.25
SRP54-209ENST00000555746 KCNK17Q96T54 332 aa7.22□□□□□ -1.25
SRP54-209ENST00000555746 ZBED2Q9BTP6 218 aa7.22□□□□□ -1.25
SRP54-209ENST00000555746 SLC4A5Q9BY07 1137 aa7.22□□□□□ -1.25
SRP54-209ENST00000555746 CLCN1P35523 988 aa7.21□□□□□ -1.26
SRP54-209ENST00000555746 FAM161AQ3B820 660 aa7.21□□□□□ -1.26
SRP54-209ENST00000555746 RBM46Q8TBY0 533 aaKnown RBP7.21□□□□□ -1.26
SRP54-209ENST00000555746 EYA1Q99502 592 aa7.21□□□□□ -1.26
SRP54-209ENST00000555746 REPIN1Q9BWE0 567 aaKnown RBP7.21□□□□□ -1.26
SRP54-209ENST00000555746 FAM205CA6NFA0 338 aa7.2□□□□□ -1.26
SRP54-209ENST00000555746 TTLL12Q14166 644 aaPredicted RBP7.2□□□□□ -1.26
SRP54-209ENST00000555746 GPCPD1Q9NPB8 672 aa7.2□□□□□ -1.26
SRP54-209ENST00000555746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.19□□□□□ -1.26
SRP54-209ENST00000555746 NBPF26B4DH59 902 aa7.19□□□□□ -1.26
SRP54-209ENST00000555746 PSEN2P49810 448 aa7.19□□□□□ -1.26
SRP54-209ENST00000555746 PROX2Q3B8N5 592 aa7.19□□□□□ -1.26
SRP54-209ENST00000555746 GIGYF2Q6Y7W6 1299 aaKnown RBP7.19□□□□□ -1.26
SRP54-209ENST00000555746 PACS2Q86VP3 889 aa7.19□□□□□ -1.26
SRP54-209ENST00000555746 TATDN2Q93075 761 aa7.19□□□□□ -1.26
SRP54-209ENST00000555746 POTEB3A0JP26 581 aa7.18□□□□□ -1.26
SRP54-209ENST00000555746 C3orf80F5H4A9 247 aa7.18□□□□□ -1.26
SRP54-209ENST00000555746 MDM2Q00987 491 aaPredicted RBP7.18□□□□□ -1.26
SRP54-209ENST00000555746 POTEBQ6S5H4 581 aa7.18□□□□□ -1.26
SRP54-209ENST00000555746 DDRGK1Q96HY6 314 aa7.18□□□□□ -1.26
SRP54-209ENST00000555746 HS3ST6Q96QI5 342 aa7.18□□□□□ -1.26
SRP54-209ENST00000555746 MS4A1P11836 297 aa7.17□□□□□ -1.26
SRP54-209ENST00000555746 DMRTA1Q5VZB9 504 aa7.17□□□□□ -1.26
SRP54-209ENST00000555746 NUDT18Q6ZVK8 323 aa7.17□□□□□ -1.26
SRP54-209ENST00000555746 FAM117AQ9C073 453 aa7.17□□□□□ -1.26
SRP54-209ENST00000555746 RABGEF1Q9UJ41 708 aa7.17□□□□□ -1.26
SRP54-209ENST00000555746 PNMA3Q9UL41 463 aa7.17□□□□□ -1.26
SRP54-209ENST00000555746 RCCD1A6NED2 376 aa7.16□□□□□ -1.26
SRP54-209ENST00000555746 IL27Q8NEV9 243 aa7.16□□□□□ -1.26
SRP54-209ENST00000555746 FAM217BQ9NTX9 383 aaPredicted RBP7.16□□□□□ -1.26
SRP54-209ENST00000555746 AXIN2Q9Y2T1 843 aa7.16□□□□□ -1.26
SRP54-209ENST00000555746 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
SRP54-209ENST00000555746 DNAJB2P25686 324 aa7.15□□□□□ -1.26
SRP54-209ENST00000555746 SSTR3P32745 418 aaPredicted RBP7.15□□□□□ -1.26
SRP54-209ENST00000555746 KIAA1468Q9P260 1216 aa7.15□□□□□ -1.26
SRP54-209ENST00000555746 VPS9D1Q9Y2B5 631 aa7.15□□□□□ -1.26
SRP54-209ENST00000555746 TK2O00142 265 aa7.14□□□□□ -1.27
SRP54-209ENST00000555746 NLRP7Q8WX94 980 aa7.14□□□□□ -1.27
SRP54-209ENST00000555746 TMEM134Q9H6X4 195 aa7.14□□□□□ -1.27
SRP54-209ENST00000555746 BHMG1C9JSJ3 638 aaPredicted RBP7.12□□□□□ -1.27
SRP54-209ENST00000555746 SMAPO00193 183 aa7.12□□□□□ -1.27
SRP54-209ENST00000555746 GOPCQ9HD26 462 aa7.12□□□□□ -1.27
SRP54-209ENST00000555746 GTF3C3Q9Y5Q9 886 aa7.12□□□□□ -1.27
SRP54-209ENST00000555746 LAPTM4BQ86VI4 370 aa7.11□□□□□ -1.27
SRP54-209ENST00000555746 LSM11P83369 360 aaKnown RBP eCLIP7.1□□□□□ -1.27
SRP54-209ENST00000555746 FAM98CQ17RN3 349 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms