RNA–Protein interactions for RNA: ENST00000555658.5

FOXN3-210, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-210ENST00000555658 PPP1R3GB7ZBB8 358 aa9.11□□□□□ -0.95
FOXN3-210ENST00000555658 PTPN5P54829 565 aa9.11□□□□□ -0.95
FOXN3-210ENST00000555658 EPAS1Q99814 870 aa9.11□□□□□ -0.95
FOXN3-210ENST00000555658 WDR70Q9NW82 654 aa9.11□□□□□ -0.95
FOXN3-210ENST00000555658 PAXIP1Q6ZW49 1069 aaPredicted RBP9.1□□□□□ -0.95
FOXN3-210ENST00000555658 WNT2BQ93097 391 aa9.1□□□□□ -0.95
FOXN3-210ENST00000555658 BHMG1C9JSJ3 638 aaPredicted RBP9.07□□□□□ -0.96
FOXN3-210ENST00000555658 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
FOXN3-210ENST00000555658 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
FOXN3-210ENST00000555658 DDX12PQ92771 950 aa9.05□□□□□ -0.96
FOXN3-210ENST00000555658 RBM33Q96EV2 1170 aaKnown RBP9.05□□□□□ -0.96
FOXN3-210ENST00000555658 SPDYE16A6NNV3 312 aaPredicted RBP9.04□□□□□ -0.96
FOXN3-210ENST00000555658 E2F4Q16254 413 aa9.04□□□□□ -0.96
FOXN3-210ENST00000555658 PROX2Q3B8N5 592 aa9.04□□□□□ -0.96
FOXN3-210ENST00000555658 C6orf132Q5T0Z8 1188 aa9.04□□□□□ -0.96
FOXN3-210ENST00000555658 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
FOXN3-210ENST00000555658 COL9A1P20849 921 aa9.03□□□□□ -0.96
FOXN3-210ENST00000555658 NBR1Q14596 966 aa9.02□□□□□ -0.97
FOXN3-210ENST00000555658 MAP3K7O43318 606 aa9.01□□□□□ -0.97
FOXN3-210ENST00000555658 LAPTM4BQ86VI4 370 aa9.01□□□□□ -0.97
FOXN3-210ENST00000555658 ONECUT3O60422 494 aaPredicted RBP9□□□□□ -0.97
FOXN3-210ENST00000555658 PDIA6Q15084 440 aa9□□□□□ -0.97
FOXN3-210ENST00000555658 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
FOXN3-210ENST00000555658 TRIM6-TRIM34B2RNG4 842 aa8.97□□□□□ -0.97
FOXN3-210ENST00000555658 EN1Q05925 392 aaPredicted RBP8.97□□□□□ -0.97
FOXN3-210ENST00000555658 PACS2Q86VP3 889 aa8.97□□□□□ -0.97
FOXN3-210ENST00000555658 GRXCR2A6NFK2 248 aa8.95□□□□□ -0.98
FOXN3-210ENST00000555658 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
FOXN3-210ENST00000555658 SEPT9Q9UHD8 586 aaPredicted RBP8.95□□□□□ -0.98
FOXN3-210ENST00000555658 FAM98CQ17RN3 349 aaKnown RBP8.94□□□□□ -0.98
FOXN3-210ENST00000555658 SOWAHBA6NEL2 793 aa8.93□□□□□ -0.98
FOXN3-210ENST00000555658 BCAMP50895 628 aa8.93□□□□□ -0.98
FOXN3-210ENST00000555658 NYAP1Q6ZVC0 841 aa8.93□□□□□ -0.98
FOXN3-210ENST00000555658 CERKQ8TCT0 537 aa8.93□□□□□ -0.98
FOXN3-210ENST00000555658 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
FOXN3-210ENST00000555658 TSR1Q2NL82 804 aaKnown RBP8.92□□□□□ -0.98
FOXN3-210ENST00000555658 LRCH3Q96II8 777 aa8.92□□□□□ -0.98
FOXN3-210ENST00000555658 IFFO2Q5TF58 517 aa8.91□□□□□ -0.98
FOXN3-210ENST00000555658 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.91□□□□□ -0.98
FOXN3-210ENST00000555658 RGS20O76081 388 aa8.88□□□□□ -0.99
FOXN3-210ENST00000555658 PRSS12P56730 875 aa8.88□□□□□ -0.99
FOXN3-210ENST00000555658 CDCA7LQ96GN5 454 aa8.88□□□□□ -0.99
FOXN3-210ENST00000555658 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
FOXN3-210ENST00000555658 NBPF26B4DH59 902 aa8.87□□□□□ -0.99
FOXN3-210ENST00000555658 HDGFP51858 240 aaKnown RBP8.87□□□□□ -0.99
FOXN3-210ENST00000555658 HPS5Q9UPZ3 1129 aa8.87□□□□□ -0.99
FOXN3-210ENST00000555658 WBP1LQ9NX94 342 aa8.86□□□□□ -0.99
FOXN3-210ENST00000555658 TSKSQ9UJT2 592 aa8.86□□□□□ -0.99
FOXN3-210ENST00000555658 A0A0G2JS52 829 aa8.85□□□□□ -0.99
FOXN3-210ENST00000555658 PPP4CP60510 307 aa8.85□□□□□ -0.99
FOXN3-210ENST00000555658 ITGBL1O95965 494 aaPredicted RBP8.83□□□□□ -1
FOXN3-210ENST00000555658 KCNC4Q03721 635 aa8.83□□□□□ -1
FOXN3-210ENST00000555658 PNMA3Q9UL41 463 aa8.83□□□□□ -1
FOXN3-210ENST00000555658 OSBPP22059 807 aa8.82□□□□□ -1
FOXN3-210ENST00000555658 ARHGEF1Q92888 912 aaKnown RBP8.82□□□□□ -1
FOXN3-210ENST00000555658 TATDN2Q93075 761 aa8.82□□□□□ -1
FOXN3-210ENST00000555658 TSHZ2Q9NRE2 1034 aa8.82□□□□□ -1
FOXN3-210ENST00000555658 SMAPO00193 183 aa8.81□□□□□ -1
FOXN3-210ENST00000555658 SLC4A3P48751 1232 aa8.81□□□□□ -1
FOXN3-210ENST00000555658 RBM27Q9P2N5 1060 aaKnown RBP8.81□□□□□ -1
FOXN3-210ENST00000555658 RNF40O75150 1001 aa8.8□□□□□ -1
FOXN3-210ENST00000555658 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
FOXN3-210ENST00000555658 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
FOXN3-210ENST00000555658 NECTIN2Q92692 538 aa8.79□□□□□ -1
FOXN3-210ENST00000555658 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
FOXN3-210ENST00000555658 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
FOXN3-210ENST00000555658 P3H3Q8IVL6 736 aa8.77□□□□□ -1.01
FOXN3-210ENST00000555658 IRX2Q9BZI1 471 aaPredicted RBP8.77□□□□□ -1.01
FOXN3-210ENST00000555658 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
FOXN3-210ENST00000555658 PADI6Q6TGC4 694 aa8.74□□□□□ -1.01
FOXN3-210ENST00000555658 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
FOXN3-210ENST00000555658 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
FOXN3-210ENST00000555658 MLLT3P42568 568 aaPredicted RBP8.71□□□□□ -1.02
FOXN3-210ENST00000555658 NUTM2FA1L443 756 aa8.7□□□□□ -1.02
FOXN3-210ENST00000555658 IL21Q9HBE4 155 aa8.7□□□□□ -1.02
FOXN3-210ENST00000555658 NPDC1Q9NQX5 325 aaPredicted RBP8.7□□□□□ -1.02
FOXN3-210ENST00000555658 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
FOXN3-210ENST00000555658 TTC13Q8NBP0 860 aa8.69□□□□□ -1.02
FOXN3-210ENST00000555658 SWT1Q5T5J6 900 aaKnown RBP8.68□□□□□ -1.02
FOXN3-210ENST00000555658 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
FOXN3-210ENST00000555658 MTRQ99707 1265 aa8.68□□□□□ -1.02
FOXN3-210ENST00000555658 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
FOXN3-210ENST00000555658 TJAP1Q5JTD0 557 aa8.67□□□□□ -1.02
FOXN3-210ENST00000555658 PTGDRQ13258 359 aa8.65□□□□□ -1.02
FOXN3-210ENST00000555658 DNAJB2P25686 324 aa8.64□□□□□ -1.03
FOXN3-210ENST00000555658 GGCXP38435 758 aa8.64□□□□□ -1.03
FOXN3-210ENST00000555658 APLP1P51693 650 aa8.64□□□□□ -1.03
FOXN3-210ENST00000555658 SMYD5Q6GMV2 418 aa8.64□□□□□ -1.03
FOXN3-210ENST00000555658 EYA1Q99502 592 aa8.64□□□□□ -1.03
FOXN3-210ENST00000555658 FCHSD2O94868 740 aa8.63□□□□□ -1.03
FOXN3-210ENST00000555658 PLCB2Q00722 1185 aa8.63□□□□□ -1.03
FOXN3-210ENST00000555658 SEMA3EO15041 775 aa8.61□□□□□ -1.03
FOXN3-210ENST00000555658 COPS2P61201 443 aa8.61□□□□□ -1.03
FOXN3-210ENST00000555658 LAPTM4AQ15012 233 aa8.61□□□□□ -1.03
FOXN3-210ENST00000555658 Q6ZNB5 142 aa8.6□□□□□ -1.03
FOXN3-210ENST00000555658 PCDHB3Q9Y5E6 796 aa8.6□□□□□ -1.03
FOXN3-210ENST00000555658 KMT5BQ4FZB7 885 aa8.59□□□□□ -1.03
FOXN3-210ENST00000555658 PPP1R18Q6NYC8 613 aa8.59□□□□□ -1.03
FOXN3-210ENST00000555658 ZNF516Q92618 1163 aa8.59□□□□□ -1.03
FOXN3-210ENST00000555658 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms