RNA–Protein interactions for RNA: ENST00000555520.1

LINC01578-206, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 3 BASIC

Gene LINC01578, Length 977 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-206ENST00000555520 MS4A1P11836 297 aa13.83□□□□□ -0.2
LINC01578-206ENST00000555520 GIGYF2Q6Y7W6 1299 aaKnown RBP13.83□□□□□ -0.2
LINC01578-206ENST00000555520 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.83□□□□□ -0.2
LINC01578-206ENST00000555520 MAP3K7O43318 606 aa13.82□□□□□ -0.2
LINC01578-206ENST00000555520 TYW1BQ6NUM6 668 aa13.82□□□□□ -0.2
LINC01578-206ENST00000555520 JPH4Q96JJ6 628 aa13.82□□□□□ -0.2
LINC01578-206ENST00000555520 PHOX2BQ99453 314 aa13.82□□□□□ -0.2
LINC01578-206ENST00000555520 GOPCQ9HD26 462 aa13.82□□□□□ -0.2
LINC01578-206ENST00000555520 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
LINC01578-206ENST00000555520 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
LINC01578-206ENST00000555520 FOSBP53539 338 aa13.79□□□□□ -0.2
LINC01578-206ENST00000555520 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
LINC01578-206ENST00000555520 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
LINC01578-206ENST00000555520 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
LINC01578-206ENST00000555520 ZMYND15Q9H091 742 aa13.75□□□□□ -0.21
LINC01578-206ENST00000555520 TTC13Q8NBP0 860 aa13.74□□□□□ -0.21
LINC01578-206ENST00000555520 ONECUT3O60422 494 aaPredicted RBP13.73□□□□□ -0.21
LINC01578-206ENST00000555520 HOXB3P14651 431 aaPredicted RBP13.72□□□□□ -0.21
LINC01578-206ENST00000555520 CLCN1P35523 988 aa13.72□□□□□ -0.21
LINC01578-206ENST00000555520 GPCPD1Q9NPB8 672 aa13.72□□□□□ -0.21
LINC01578-206ENST00000555520 C6orf132Q5T0Z8 1188 aa13.71□□□□□ -0.21
LINC01578-206ENST00000555520 MDM2Q00987 491 aaPredicted RBP13.7□□□□□ -0.22
LINC01578-206ENST00000555520 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
LINC01578-206ENST00000555520 PADI6Q6TGC4 694 aa13.69□□□□□ -0.22
LINC01578-206ENST00000555520 CERKQ8TCT0 537 aa13.69□□□□□ -0.22
LINC01578-206ENST00000555520 ADGRG1Q9Y653 693 aa13.69□□□□□ -0.22
LINC01578-206ENST00000555520 FAM161AQ3B820 660 aa13.68□□□□□ -0.22
LINC01578-206ENST00000555520 SH3D19Q5HYK7 790 aa13.68□□□□□ -0.22
LINC01578-206ENST00000555520 RBM27Q9P2N5 1060 aaKnown RBP13.68□□□□□ -0.22
LINC01578-206ENST00000555520 KHSRPQ92945 711 aaKnown RBP eCLIP13.67□□□□□ -0.221e-8■□□□□ 10.2
LINC01578-206ENST00000555520 ZDHHC16Q969W1 377 aa13.67□□□□□ -0.22
LINC01578-206ENST00000555520 PXYLP1Q8TE99 480 aa13.66□□□□□ -0.22
LINC01578-206ENST00000555520 ADAM33Q9BZ11 813 aa13.66□□□□□ -0.22
LINC01578-206ENST00000555520 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
LINC01578-206ENST00000555520 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
LINC01578-206ENST00000555520 ZNF454Q8N9F8 522 aa13.65□□□□□ -0.22
LINC01578-206ENST00000555520 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
LINC01578-206ENST00000555520 POTEB2H3BUK9 544 aa13.64□□□□□ -0.23
LINC01578-206ENST00000555520 OATP04181 439 aa13.64□□□□□ -0.23
LINC01578-206ENST00000555520 NUDT7P0C024 238 aa13.64□□□□□ -0.23
LINC01578-206ENST00000555520 HOMEZQ8IX15 550 aa13.64□□□□□ -0.23
LINC01578-206ENST00000555520 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
LINC01578-206ENST00000555520 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
LINC01578-206ENST00000555520 ZSWIM6Q9HCJ5 1215 aa13.63□□□□□ -0.23
LINC01578-206ENST00000555520 NLRP7Q8WX94 980 aa13.62□□□□□ -0.23
LINC01578-206ENST00000555520 FLIIQ13045 1269 aa13.61□□□□□ -0.23
LINC01578-206ENST00000555520 DOK7Q18PE1 504 aa13.61□□□□□ -0.23
LINC01578-206ENST00000555520 PCMTD1Q96MG8 357 aaPredicted RBP13.61□□□□□ -0.23
LINC01578-206ENST00000555520 PRSS12P56730 875 aa13.59□□□□□ -0.23
LINC01578-206ENST00000555520 BEGAINQ9BUH8 593 aa13.59□□□□□ -0.23
LINC01578-206ENST00000555520 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
LINC01578-206ENST00000555520 SKIV2LQ15477 1246 aaKnown RBP13.58□□□□□ -0.24
LINC01578-206ENST00000555520 CDCA7LQ96GN5 454 aa13.56□□□□□ -0.24
LINC01578-206ENST00000555520 C1orf115Q9H7X2 142 aa13.55□□□□□ -0.24
LINC01578-206ENST00000555520 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
LINC01578-206ENST00000555520 COL9A1P20849 921 aa13.53□□□□□ -0.24
LINC01578-206ENST00000555520 PROCA1Q8NCQ7 364 aaPredicted RBP13.52□□□□□ -0.25
LINC01578-206ENST00000555520 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC01578-206ENST00000555520 MYSM1Q5VVJ2 828 aa13.51□□□□□ -0.25
LINC01578-206ENST00000555520 EYA1Q99502 592 aa13.51□□□□□ -0.25
LINC01578-206ENST00000555520 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
LINC01578-206ENST00000555520 RIMBP2O15034 1052 aa13.5□□□□□ -0.25
LINC01578-206ENST00000555520 MCM6Q14566 821 aa13.5□□□□□ -0.25
LINC01578-206ENST00000555520 C3orf80F5H4A9 247 aa13.49□□□□□ -0.25
LINC01578-206ENST00000555520 RBM46Q8TBY0 533 aaKnown RBP13.49□□□□□ -0.25
LINC01578-206ENST00000555520 A6NJR5 290 aa13.48□□□□□ -0.25
LINC01578-206ENST00000555520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.47□□□□□ -0.25
LINC01578-206ENST00000555520 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
LINC01578-206ENST00000555520 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
LINC01578-206ENST00000555520 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
LINC01578-206ENST00000555520 FBXO31Q5XUX0 539 aaPredicted RBP13.45□□□□□ -0.26
LINC01578-206ENST00000555520 TBC1D2Q9BYX2 928 aa13.45□□□□□ -0.26
LINC01578-206ENST00000555520 POLR3EQ9NVU0 708 aa13.45□□□□□ -0.26
LINC01578-206ENST00000555520 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
LINC01578-206ENST00000555520 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
LINC01578-206ENST00000555520 CLUAP1Q96AJ1 413 aa13.43□□□□□ -0.26
LINC01578-206ENST00000555520 CD46P15529 392 aa13.42□□□□□ -0.26
LINC01578-206ENST00000555520 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
LINC01578-206ENST00000555520 ZNF710Q8N1W2 664 aa13.42□□□□□ -0.26
LINC01578-206ENST00000555520 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
LINC01578-206ENST00000555520 MAMSTRQ6ZN01 415 aa13.41□□□□□ -0.26
LINC01578-206ENST00000555520 HOXB1P14653 301 aaPredicted RBP13.4□□□□□ -0.26
LINC01578-206ENST00000555520 UBTFP17480 764 aaKnown RBP13.4□□□□□ -0.26
LINC01578-206ENST00000555520 SPIRE2Q8WWL2 714 aa13.39□□□□□ -0.27
LINC01578-206ENST00000555520 LIMD1Q9UGP4 676 aa13.39□□□□□ -0.27
LINC01578-206ENST00000555520 TRAK2O60296 914 aa13.38□□□□□ -0.27
LINC01578-206ENST00000555520 PTPREP23469 700 aa13.38□□□□□ -0.27
LINC01578-206ENST00000555520 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
LINC01578-206ENST00000555520 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
LINC01578-206ENST00000555520 DIXDC1Q155Q3 683 aa13.37□□□□□ -0.27
LINC01578-206ENST00000555520 TUSC1Q2TAM9 212 aa13.37□□□□□ -0.27
LINC01578-206ENST00000555520 PPP2R2DQ66LE6 453 aa13.37□□□□□ -0.27
LINC01578-206ENST00000555520 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
LINC01578-206ENST00000555520 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
LINC01578-206ENST00000555520 DNAJB2P25686 324 aa13.35□□□□□ -0.27
LINC01578-206ENST00000555520 FNBP4Q8N3X1 1017 aaPredicted RBP13.35□□□□□ -0.27
LINC01578-206ENST00000555520 TATDN2Q93075 761 aa13.35□□□□□ -0.27
LINC01578-206ENST00000555520 SPTLC1O15269 473 aa13.34□□□□□ -0.27
LINC01578-206ENST00000555520 RFC5P40937 340 aa13.34□□□□□ -0.27
LINC01578-206ENST00000555520 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms