RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 RBM33Q96EV2 1170 aaKnown RBP5.91□□□□□ -1.46
SEC23A-208ENST00000555017 OSBPP22059 807 aa5.9□□□□□ -1.46
SEC23A-208ENST00000555017 SPDYE16A6NNV3 312 aaPredicted RBP5.89□□□□□ -1.47
SEC23A-208ENST00000555017 PHF14O94880 888 aa5.89□□□□□ -1.47
SEC23A-208ENST00000555017 NBR1Q14596 966 aa5.89□□□□□ -1.47
SEC23A-208ENST00000555017 TSR1Q2NL82 804 aaKnown RBP5.89□□□□□ -1.47
SEC23A-208ENST00000555017 MYO15BQ96JP2 1530 aa5.89□□□□□ -1.47
SEC23A-208ENST00000555017 COL9A1P20849 921 aa5.88□□□□□ -1.47
SEC23A-208ENST00000555017 PPP4R3BQ5MIZ7 849 aa5.88□□□□□ -1.47
SEC23A-208ENST00000555017 P3H3Q8IVL6 736 aa5.88□□□□□ -1.47
SEC23A-208ENST00000555017 ZDHHC16Q969W1 377 aa5.88□□□□□ -1.47
SEC23A-208ENST00000555017 JPH4Q96JJ6 628 aa5.88□□□□□ -1.47
SEC23A-208ENST00000555017 IRX2Q9BZI1 471 aaPredicted RBP5.88□□□□□ -1.47
SEC23A-208ENST00000555017 CDHR5Q9HBB8 845 aa5.88□□□□□ -1.47
SEC23A-208ENST00000555017 KCNK17Q96T54 332 aa5.87□□□□□ -1.47
SEC23A-208ENST00000555017 TESPA1A2RU30 521 aaPredicted RBP5.86□□□□□ -1.47
SEC23A-208ENST00000555017 RBM26Q5T8P6 1007 aaKnown RBP5.86□□□□□ -1.47
SEC23A-208ENST00000555017 TYW1BQ6NUM6 668 aa5.86□□□□□ -1.47
SEC23A-208ENST00000555017 ANKRD13DQ6ZTN6 518 aa5.86□□□□□ -1.47
SEC23A-208ENST00000555017 BICRAQ9NZM4 1560 aa5.85□□□□□ -1.47
SEC23A-208ENST00000555017 C6orf132Q5T0Z8 1188 aa5.85□□□□□ -1.47
SEC23A-208ENST00000555017 BCL2L12Q9HB09 334 aa5.85□□□□□ -1.47
SEC23A-208ENST00000555017 ARHGAP33O14559 1287 aa5.84□□□□□ -1.47
SEC23A-208ENST00000555017 EN1Q05925 392 aaPredicted RBP5.84□□□□□ -1.47
SEC23A-208ENST00000555017 PROX2Q3B8N5 592 aa5.84□□□□□ -1.47
SEC23A-208ENST00000555017 MAP3K7O43318 606 aa5.83□□□□□ -1.48
SEC23A-208ENST00000555017 RGS20O76081 388 aa5.83□□□□□ -1.48
SEC23A-208ENST00000555017 EPAS1Q99814 870 aa5.83□□□□□ -1.48
SEC23A-208ENST00000555017 FAM198AQ9UFP1 575 aa5.83□□□□□ -1.48
SEC23A-208ENST00000555017 PSDA5PKW4 1024 aaPredicted RBP5.82□□□□□ -1.48
SEC23A-208ENST00000555017 C3orf80F5H4A9 247 aa5.82□□□□□ -1.48
SEC23A-208ENST00000555017 PTPREP23469 700 aa5.82□□□□□ -1.48
SEC23A-208ENST00000555017 LSM11P83369 360 aaKnown RBP eCLIP5.82□□□□□ -1.48
SEC23A-208ENST00000555017 NPDC1Q9NQX5 325 aaPredicted RBP5.82□□□□□ -1.48
SEC23A-208ENST00000555017 FBXW7Q969H0 707 aa5.81□□□□□ -1.48
SEC23A-208ENST00000555017 ZBED2Q9BTP6 218 aa5.81□□□□□ -1.48
SEC23A-208ENST00000555017 HCSTQ9UBK5 93 aa5.81□□□□□ -1.48
SEC23A-208ENST00000555017 NUTM2FA1L443 756 aa5.79□□□□□ -1.48
SEC23A-208ENST00000555017 FECHP22830 423 aa5.79□□□□□ -1.48
SEC23A-208ENST00000555017 ADGRD1Q6QNK2 874 aa5.79□□□□□ -1.48
SEC23A-208ENST00000555017 TSKSQ9UJT2 592 aa5.79□□□□□ -1.48
SEC23A-208ENST00000555017 VPS9D1Q9Y2B5 631 aa5.79□□□□□ -1.48
SEC23A-208ENST00000555017 HRO43593 1189 aa5.78□□□□□ -1.48
SEC23A-208ENST00000555017 PBX2P40425 430 aa5.78□□□□□ -1.48
SEC23A-208ENST00000555017 FAM161AQ3B820 660 aa5.78□□□□□ -1.48
SEC23A-208ENST00000555017 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.78□□□□□ -1.48
SEC23A-208ENST00000555017 CECR2Q9BXF3 1484 aa5.77□□□□□ -1.49
SEC23A-208ENST00000555017 PPP1R3GB7ZBB8 358 aa5.77□□□□□ -1.49
SEC23A-208ENST00000555017 SMAPO00193 183 aa5.77□□□□□ -1.49
SEC23A-208ENST00000555017 GPR37O15354 613 aa5.77□□□□□ -1.49
SEC23A-208ENST00000555017 PTGDRQ13258 359 aa5.76□□□□□ -1.49
SEC23A-208ENST00000555017 PADI6Q6TGC4 694 aa5.76□□□□□ -1.49
SEC23A-208ENST00000555017 CDCA7LQ96GN5 454 aa5.76□□□□□ -1.49
SEC23A-208ENST00000555017 KIAA1468Q9P260 1216 aa5.76□□□□□ -1.49
SEC23A-208ENST00000555017 BHMG1C9JSJ3 638 aaPredicted RBP5.75□□□□□ -1.49
SEC23A-208ENST00000555017 PRSS12P56730 875 aa5.75□□□□□ -1.49
SEC23A-208ENST00000555017 SEPT9Q9UHD8 586 aaPredicted RBP5.75□□□□□ -1.49
SEC23A-208ENST00000555017 TRIM6-TRIM34B2RNG4 842 aa5.74□□□□□ -1.49
SEC23A-208ENST00000555017 LMOD2Q6P5Q4 547 aa5.74□□□□□ -1.49
SEC23A-208ENST00000555017 TK2O00142 265 aa5.73□□□□□ -1.49
SEC23A-208ENST00000555017 SMYD5Q6GMV2 418 aa5.73□□□□□ -1.49
SEC23A-208ENST00000555017 SLC4A5Q9BY07 1137 aa5.73□□□□□ -1.49
SEC23A-208ENST00000555017 GPIHBP1Q8IV16 184 aa5.72□□□□□ -1.49
SEC23A-208ENST00000555017 TTC13Q8NBP0 860 aa5.72□□□□□ -1.49
SEC23A-208ENST00000555017 KCNH8Q96L42 1107 aa5.72□□□□□ -1.49
SEC23A-208ENST00000555017 SUPT5HO00267 1087 aaKnown RBP5.71□□□□□ -1.5
SEC23A-208ENST00000555017 NUDT18Q6ZVK8 323 aa5.71□□□□□ -1.5
SEC23A-208ENST00000555017 NLRP7Q8WX94 980 aa5.71□□□□□ -1.5
SEC23A-208ENST00000555017 TATDN2Q93075 761 aa5.71□□□□□ -1.5
SEC23A-208ENST00000555017 RABGEF1Q9UJ41 708 aa5.71□□□□□ -1.5
SEC23A-208ENST00000555017 PNMA3Q9UL41 463 aa5.71□□□□□ -1.5
SEC23A-208ENST00000555017 MROH2BQ7Z745 1585 aa5.71□□□□□ -1.5
SEC23A-208ENST00000555017 PHOX2BQ99453 314 aa5.7□□□□□ -1.5
SEC23A-208ENST00000555017 GNPATO15228 680 aa5.69□□□□□ -1.5
SEC23A-208ENST00000555017 FCHSD2O94868 740 aa5.69□□□□□ -1.5
SEC23A-208ENST00000555017 ZC3H15Q8WU90 426 aaKnown RBP5.69□□□□□ -1.5
SEC23A-208ENST00000555017 KCTD12Q96CX2 325 aaKnown RBP5.69□□□□□ -1.5
SEC23A-208ENST00000555017 BCANQ96GW7 911 aa5.69□□□□□ -1.5
SEC23A-208ENST00000555017 WIZO95785 1651 aa5.69□□□□□ -1.5
SEC23A-208ENST00000555017 Q6ZNB5 142 aa5.68□□□□□ -1.5
SEC23A-208ENST00000555017 MRPL50Q8N5N7 158 aaKnown RBP5.68□□□□□ -1.5
SEC23A-208ENST00000555017 CERKQ8TCT0 537 aa5.68□□□□□ -1.5
SEC23A-208ENST00000555017 EYA1Q99502 592 aa5.68□□□□□ -1.5
SEC23A-208ENST00000555017 ADGRG1Q9Y653 693 aa5.68□□□□□ -1.5
SEC23A-208ENST00000555017 ONECUT3O60422 494 aaPredicted RBP5.67□□□□□ -1.5
SEC23A-208ENST00000555017 HIC1Q14526 733 aa5.67□□□□□ -1.5
SEC23A-208ENST00000555017 PACS2Q86VP3 889 aa5.67□□□□□ -1.5
SEC23A-208ENST00000555017 ZFRQ96KR1 1074 aaKnown RBP5.67□□□□□ -1.5
SEC23A-208ENST00000555017 SMARCA4P51532 1647 aa5.66□□□□□ -1.5
SEC23A-208ENST00000555017 BCAMP50895 628 aa5.66□□□□□ -1.5
SEC23A-208ENST00000555017 LOC100996750A0A140TA64 210 aa5.65□□□□□ -1.5
SEC23A-208ENST00000555017 ZMYND10O75800 440 aa5.65□□□□□ -1.5
SEC23A-208ENST00000555017 PTPN5P54829 565 aa5.65□□□□□ -1.5
SEC23A-208ENST00000555017 SAMD7Q7Z3H4 446 aa5.65□□□□□ -1.5
SEC23A-208ENST00000555017 WNT2BQ93097 391 aa5.65□□□□□ -1.5
SEC23A-208ENST00000555017 STAC3Q96MF2 364 aa5.65□□□□□ -1.5
SEC23A-208ENST00000555017 KRTAP4-6Q9BYQ5 205 aa5.65□□□□□ -1.5
SEC23A-208ENST00000555017 RBM27Q9P2N5 1060 aaKnown RBP5.65□□□□□ -1.5
SEC23A-208ENST00000555017 RSF1Q96T23 1441 aaPredicted RBP5.65□□□□□ -1.51
SEC23A-208ENST00000555017 EIF4G1Q04637 1599 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms