RNA–Protein interactions for RNA: ENST00000554439.5

PRPF39-207, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,982 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-207ENST00000554439 HOMEZQ8IX15 550 aa3.95□□□□□ -1.78
PRPF39-207ENST00000554439 MICALL2Q8IY33 904 aa3.95□□□□□ -1.78
PRPF39-207ENST00000554439 ARHGEF1Q92888 912 aaKnown RBP3.95□□□□□ -1.78
PRPF39-207ENST00000554439 PPP1R37O75864 691 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 SLC24A3Q9HC58 644 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 LHX6Q9UPM6 363 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 SEMA3EO15041 775 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 PTPN5P54829 565 aa3.94□□□□□ -1.78
PRPF39-207ENST00000554439 ACIN1Q9UKV3 1341 aaKnown RBP3.94□□□□□ -1.78
PRPF39-207ENST00000554439 TESPA1A2RU30 521 aaPredicted RBP3.93□□□□□ -1.78
PRPF39-207ENST00000554439 RBAK-RBAKDNI3L0D1 243 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 AXIN2Q9Y2T1 843 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 ABCC9O60706 1549 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 RSF1Q96T23 1441 aaPredicted RBP3.93□□□□□ -1.78
PRPF39-207ENST00000554439 TMEM92Q6UXU6 159 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 FBXO22Q8NEZ5 403 aa3.93□□□□□ -1.78
PRPF39-207ENST00000554439 RB1CC1Q8TDY2 1594 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 ZMYND10O75800 440 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 TTBK1Q5TCY1 1321 aaPredicted RBP3.92□□□□□ -1.78
PRPF39-207ENST00000554439 NEUROD2Q15784 382 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 E2F4Q16254 413 aa3.92□□□□□ -1.78
PRPF39-207ENST00000554439 CCER1Q8TC90 406 aaPredicted RBP3.92□□□□□ -1.78
PRPF39-207ENST00000554439 NCKAP5LQ9HCH0 1330 aa3.91□□□□□ -1.78
PRPF39-207ENST00000554439 SUZ12Q15022 739 aaKnown RBP3.9□□□□□ -1.78
PRPF39-207ENST00000554439 V9GY48 417 aaPredicted RBP3.9□□□□□ -1.78
PRPF39-207ENST00000554439 SCRIBQ14160 1630 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 FAM181BA6NEQ2 426 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 GOLGA8CPA6NN73 597 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 DIEXFQ68CQ4 756 aaKnown RBP3.9□□□□□ -1.79
PRPF39-207ENST00000554439 CABP2Q9NPB3 220 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 LCE2AQ5TA79 106 aaPredicted RBP3.9□□□□□ -1.79
PRPF39-207ENST00000554439 PCDHGA4Q9Y5G9 962 aa3.9□□□□□ -1.79
PRPF39-207ENST00000554439 SOX12O15370 315 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 WIPF1O43516 503 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 PPP4R3BQ5MIZ7 849 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 KHSRPQ92945 711 aaKnown RBP eCLIP3.89□□□□□ -1.795e-10■■■□□ 16.6
PRPF39-207ENST00000554439 NUDT7P0C024 238 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 KCNC4Q03721 635 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 DMRTA1Q5VZB9 504 aa3.89□□□□□ -1.79
PRPF39-207ENST00000554439 EFCAB3Q8N7B9 438 aa3.88□□□□□ -1.79
PRPF39-207ENST00000554439 PHF8Q9UPP1 1060 aa3.88□□□□□ -1.79
PRPF39-207ENST00000554439 VPS9D1Q9Y2B5 631 aa3.88□□□□□ -1.79
PRPF39-207ENST00000554439 ARIH1Q9Y4X5 557 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-207ENST00000554439 MFSD10Q14728 455 aa3.87□□□□□ -1.79
PRPF39-207ENST00000554439 BARGINQ6ZT62 677 aa3.87□□□□□ -1.79
PRPF39-207ENST00000554439 WNT2BQ93097 391 aa3.87□□□□□ -1.79
PRPF39-207ENST00000554439 YTHDC1Q96MU7 727 aaKnown RBP3.87□□□□□ -1.79
PRPF39-207ENST00000554439 CENPBP07199 599 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-207ENST00000554439 MS4A4AQ96JQ5 239 aa3.86□□□□□ -1.79
PRPF39-207ENST00000554439 BHMG1C9JSJ3 638 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-207ENST00000554439 NLRP6P59044 892 aa3.86□□□□□ -1.79
PRPF39-207ENST00000554439 CRISPLD2Q9H0B8 497 aa3.86□□□□□ -1.79
PRPF39-207ENST00000554439 GPBP1L1Q9HC44 474 aaPredicted RBP3.86□□□□□ -1.79
PRPF39-207ENST00000554439 CAMK2BQ13554 666 aa3.85□□□□□ -1.79
PRPF39-207ENST00000554439 CECR2Q9BXF3 1484 aa3.85□□□□□ -1.79
PRPF39-207ENST00000554439 LARP6Q9BRS8 491 aaKnown RBP3.85□□□□□ -1.79
PRPF39-207ENST00000554439 DGAT1O75907 488 aa3.84□□□□□ -1.79
PRPF39-207ENST00000554439 RBM26Q5T8P6 1007 aaKnown RBP3.84□□□□□ -1.79
PRPF39-207ENST00000554439 UBTFP17480 764 aaKnown RBP3.84□□□□□ -1.8
PRPF39-207ENST00000554439 MLLT3P42568 568 aaPredicted RBP3.84□□□□□ -1.8
PRPF39-207ENST00000554439 MROH2BQ7Z745 1585 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 PDE4AP27815 886 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 SMYD5Q6GMV2 418 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 MRPL50Q8N5N7 158 aaKnown RBP3.83□□□□□ -1.8
PRPF39-207ENST00000554439 DDX27Q96GQ7 796 aaKnown RBP3.83□□□□□ -1.8
PRPF39-207ENST00000554439 NBPF3Q9H094 633 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 WIZO95785 1651 aa3.83□□□□□ -1.8
PRPF39-207ENST00000554439 PSEN2P49810 448 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 AK7Q96M32 723 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 IL27Q8NEV9 243 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 KDM4CQ9H3R0 1056 aa3.82□□□□□ -1.8
PRPF39-207ENST00000554439 ANO8Q9HCE9 1232 aaPredicted RBP3.82□□□□□ -1.8
PRPF39-207ENST00000554439 KDM4FA0A1W2PPD8 638 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 KIF3CO14782 793 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 MYT1Q01538 1121 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 WFS1O76024 890 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 ZMYND15Q9H091 742 aa3.81□□□□□ -1.8
PRPF39-207ENST00000554439 ABCC8Q09428 1581 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 TRIM66O15016 1216 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 GPR37O15354 613 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 GPIHBP1Q8IV16 184 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 CEP162Q5TB80 1403 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 CCDC88BA6NC98 1476 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 ANKK1Q8NFD2 765 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 C1orf115Q9H7X2 142 aa3.8□□□□□ -1.8
PRPF39-207ENST00000554439 PDE4DQ08499 809 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 PDZRN3Q9UPQ7 1066 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 SOGA1O94964 1423 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 PRKD2Q9BZL6 878 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 PODXL2Q9NZ53 605 aa3.79□□□□□ -1.8
PRPF39-207ENST00000554439 WRNQ14191 1432 aaPredicted RBP eCLIP3.78□□□□□ -1.8
PRPF39-207ENST00000554439 TBC1D12O60347 775 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 EMILIN3Q9NT22 766 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 EIF4G1Q04637 1599 aaKnown RBP3.78□□□□□ -1.8
PRPF39-207ENST00000554439 LAPTM4BQ86VI4 370 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 RUSC2Q8N2Y8 1516 aa3.78□□□□□ -1.8
PRPF39-207ENST00000554439 FAM117AQ9C073 453 aa3.78□□□□□ -1.81
PRPF39-207ENST00000554439 PLEKHG3A1L390 1219 aa3.77□□□□□ -1.81
PRPF39-207ENST00000554439 PTCD2Q8WV60 388 aaKnown RBP3.77□□□□□ -1.81
PRPF39-207ENST00000554439 KRI1Q8N9T8 703 aaKnown RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms