RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 FBXW7Q969H0 707 aa7.38□□□□□ -1.23
SLIRP-202ENST00000553981 NBPF3Q9H094 633 aa7.38□□□□□ -1.23
SLIRP-202ENST00000553981 PROX2Q3B8N5 592 aa7.37□□□□□ -1.23
SLIRP-202ENST00000553981 RABGEF1Q9UJ41 708 aa7.36□□□□□ -1.23
SLIRP-202ENST00000553981 CCDC180Q9P1Z9 1646 aa7.35□□□□□ -1.23
SLIRP-202ENST00000553981 EPAS1Q99814 870 aa7.34□□□□□ -1.23
SLIRP-202ENST00000553981 C6orf132Q5T0Z8 1188 aa7.33□□□□□ -1.24
SLIRP-202ENST00000553981 SPRYD3Q8NCJ5 442 aa7.33□□□□□ -1.24
SLIRP-202ENST00000553981 DDX12PQ92771 950 aa7.32□□□□□ -1.24
SLIRP-202ENST00000553981 AMER1Q5JTC6 1135 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-202ENST00000553981 RBM33Q96EV2 1170 aaKnown RBP7.31□□□□□ -1.24
SLIRP-202ENST00000553981 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
SLIRP-202ENST00000553981 KIAA1468Q9P260 1216 aa7.31□□□□□ -1.24
SLIRP-202ENST00000553981 ONECUT3O60422 494 aaPredicted RBP7.3□□□□□ -1.24
SLIRP-202ENST00000553981 IFFO2Q5TF58 517 aa7.3□□□□□ -1.24
SLIRP-202ENST00000553981 LAPTM4BQ86VI4 370 aa7.3□□□□□ -1.24
SLIRP-202ENST00000553981 ANKK1Q8NFD2 765 aa7.3□□□□□ -1.24
SLIRP-202ENST00000553981 PDIA6Q15084 440 aa7.29□□□□□ -1.24
SLIRP-202ENST00000553981 RTN4Q9NQC3 1192 aaKnown RBP7.29□□□□□ -1.24
SLIRP-202ENST00000553981 TRIM6-TRIM34B2RNG4 842 aa7.28□□□□□ -1.24
SLIRP-202ENST00000553981 BCAMP50895 628 aa7.28□□□□□ -1.24
SLIRP-202ENST00000553981 NBR1Q14596 966 aa7.28□□□□□ -1.24
SLIRP-202ENST00000553981 ZFRQ96KR1 1074 aaKnown RBP7.28□□□□□ -1.24
SLIRP-202ENST00000553981 SOWAHBA6NEL2 793 aa7.27□□□□□ -1.25
SLIRP-202ENST00000553981 EN1Q05925 392 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-202ENST00000553981 TSR1Q2NL82 804 aaKnown RBP7.27□□□□□ -1.25
SLIRP-202ENST00000553981 PAXIP1Q6ZW49 1069 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-202ENST00000553981 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
SLIRP-202ENST00000553981 SEPT9Q9UHD8 586 aaPredicted RBP7.27□□□□□ -1.25
SLIRP-202ENST00000553981 SPDYE16A6NNV3 312 aaPredicted RBP7.26□□□□□ -1.25
SLIRP-202ENST00000553981 E2F4Q16254 413 aa7.26□□□□□ -1.25
SLIRP-202ENST00000553981 A0A0G2JS52 829 aa7.25□□□□□ -1.25
SLIRP-202ENST00000553981 MAP3K7O43318 606 aa7.25□□□□□ -1.25
SLIRP-202ENST00000553981 FAM98CQ17RN3 349 aaKnown RBP7.24□□□□□ -1.25
SLIRP-202ENST00000553981 TSKSQ9UJT2 592 aa7.24□□□□□ -1.25
SLIRP-202ENST00000553981 PRIM1P49642 420 aaKnown RBP7.23□□□□□ -1.25
SLIRP-202ENST00000553981 WDR70Q9NW82 654 aa7.23□□□□□ -1.25
SLIRP-202ENST00000553981 WBP1LQ9NX94 342 aa7.23□□□□□ -1.25
SLIRP-202ENST00000553981 ARIH1Q9Y4X5 557 aaPredicted RBP7.23□□□□□ -1.25
SLIRP-202ENST00000553981 RGS20O76081 388 aa7.22□□□□□ -1.25
SLIRP-202ENST00000553981 ITGBL1O95965 494 aaPredicted RBP7.22□□□□□ -1.25
SLIRP-202ENST00000553981 GRXCR2A6NFK2 248 aa7.21□□□□□ -1.26
SLIRP-202ENST00000553981 NYAP1Q6ZVC0 841 aa7.21□□□□□ -1.26
SLIRP-202ENST00000553981 PACS2Q86VP3 889 aa7.21□□□□□ -1.26
SLIRP-202ENST00000553981 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.2□□□□□ -1.26
SLIRP-202ENST00000553981 CDCA7LQ96GN5 454 aa7.19□□□□□ -1.26
SLIRP-202ENST00000553981 LRCH3Q96II8 777 aa7.19□□□□□ -1.26
SLIRP-202ENST00000553981 FAM198AQ9UFP1 575 aa7.19□□□□□ -1.26
SLIRP-202ENST00000553981 TSR3Q9UJK0 312 aaKnown RBP7.19□□□□□ -1.26
SLIRP-202ENST00000553981 HPS5Q9UPZ3 1129 aa7.19□□□□□ -1.26
SLIRP-202ENST00000553981 PRSS12P56730 875 aa7.18□□□□□ -1.26
SLIRP-202ENST00000553981 CERKQ8TCT0 537 aa7.18□□□□□ -1.26
SLIRP-202ENST00000553981 C3orf80F5H4A9 247 aa7.17□□□□□ -1.26
SLIRP-202ENST00000553981 SMAPO00193 183 aa7.17□□□□□ -1.26
SLIRP-202ENST00000553981 OSBPP22059 807 aa7.17□□□□□ -1.26
SLIRP-202ENST00000553981 CDHR5Q9HBB8 845 aa7.17□□□□□ -1.26
SLIRP-202ENST00000553981 KCNC4Q03721 635 aa7.15□□□□□ -1.26
SLIRP-202ENST00000553981 SAMD7Q7Z3H4 446 aa7.15□□□□□ -1.26
SLIRP-202ENST00000553981 TATDN2Q93075 761 aa7.15□□□□□ -1.26
SLIRP-202ENST00000553981 IRX2Q9BZI1 471 aaPredicted RBP7.14□□□□□ -1.27
SLIRP-202ENST00000553981 PNMA3Q9UL41 463 aa7.14□□□□□ -1.27
SLIRP-202ENST00000553981 NBPF26B4DH59 902 aa7.13□□□□□ -1.27
SLIRP-202ENST00000553981 PPP4CP60510 307 aa7.13□□□□□ -1.27
SLIRP-202ENST00000553981 RBM27Q9P2N5 1060 aaKnown RBP7.12□□□□□ -1.27
SLIRP-202ENST00000553981 NUDT18Q6ZVK8 323 aa7.11□□□□□ -1.27
SLIRP-202ENST00000553981 NPDC1Q9NQX5 325 aaPredicted RBP7.1□□□□□ -1.27
SLIRP-202ENST00000553981 TSHZ2Q9NRE2 1034 aa7.1□□□□□ -1.27
SLIRP-202ENST00000553981 TJAP1Q5JTD0 557 aa7.09□□□□□ -1.27
SLIRP-202ENST00000553981 PADI6Q6TGC4 694 aa7.09□□□□□ -1.27
SLIRP-202ENST00000553981 TTC13Q8NBP0 860 aa7.09□□□□□ -1.27
SLIRP-202ENST00000553981 MLLT3P42568 568 aaPredicted RBP7.07□□□□□ -1.28
SLIRP-202ENST00000553981 ARHGEF1Q92888 912 aaKnown RBP7.07□□□□□ -1.28
SLIRP-202ENST00000553981 RNF40O75150 1001 aa7.06□□□□□ -1.28
SLIRP-202ENST00000553981 HDGFP51858 240 aaKnown RBP7.06□□□□□ -1.28
SLIRP-202ENST00000553981 KCNV2Q8TDN2 545 aa7.06□□□□□ -1.28
SLIRP-202ENST00000553981 MTRQ99707 1265 aa7.06□□□□□ -1.28
SLIRP-202ENST00000553981 APLP1P51693 650 aa7.05□□□□□ -1.28
SLIRP-202ENST00000553981 RB1CC1Q8TDY2 1594 aa7.04□□□□□ -1.28
SLIRP-202ENST00000553981 SWT1Q5T5J6 900 aaKnown RBP7.04□□□□□ -1.28
SLIRP-202ENST00000553981 IL21Q9HBE4 155 aa7.04□□□□□ -1.28
SLIRP-202ENST00000553981 ZNF516Q92618 1163 aa7.03□□□□□ -1.28
SLIRP-202ENST00000553981 EYA1Q99502 592 aa7.03□□□□□ -1.28
SLIRP-202ENST00000553981 UNC13AQ9UPW8 1703 aa7.02□□□□□ -1.29
SLIRP-202ENST00000553981 PTGDRQ13258 359 aa7.01□□□□□ -1.29
SLIRP-202ENST00000553981 PPP1R18Q6NYC8 613 aa7.01□□□□□ -1.29
SLIRP-202ENST00000553981 SLF2Q8IX21 1173 aa7.01□□□□□ -1.29
SLIRP-202ENST00000553981 NECTIN2Q92692 538 aa7□□□□□ -1.29
SLIRP-202ENST00000553981 BICRAQ9NZM4 1560 aa6.99□□□□□ -1.29
SLIRP-202ENST00000553981 Q6ZNB5 142 aa6.99□□□□□ -1.29
SLIRP-202ENST00000553981 PRKD2Q9BZL6 878 aa6.99□□□□□ -1.29
SLIRP-202ENST00000553981 COPS2P61201 443 aa6.98□□□□□ -1.29
SLIRP-202ENST00000553981 NKX2-3Q8TAU0 364 aa6.98□□□□□ -1.29
SLIRP-202ENST00000553981 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.98□□□□□ -1.29
SLIRP-202ENST00000553981 NACADO15069 1562 aa6.98□□□□□ -1.29
SLIRP-202ENST00000553981 SLC4A3P48751 1232 aa6.97□□□□□ -1.29
SLIRP-202ENST00000553981 NUTM2FA1L443 756 aa6.96□□□□□ -1.3
SLIRP-202ENST00000553981 DNAJB2P25686 324 aa6.96□□□□□ -1.3
SLIRP-202ENST00000553981 P3H3Q8IVL6 736 aa6.96□□□□□ -1.3
SLIRP-202ENST00000553981 ADGRG1Q9Y653 693 aa6.96□□□□□ -1.3
SLIRP-202ENST00000553981 SEMA3EO15041 775 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms