RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 THSD4Q6ZMP0 1018 aa7.57□□□□□ -1.2
FOXN3-203ENST00000553353 NBPF3Q9H094 633 aa7.57□□□□□ -1.2
FOXN3-203ENST00000553353 WNT2BQ93097 391 aa7.55□□□□□ -1.2
FOXN3-203ENST00000553353 ADAM33Q9BZ11 813 aa7.55□□□□□ -1.2
FOXN3-203ENST00000553353 PPP1R3GB7ZBB8 358 aa7.53□□□□□ -1.2
FOXN3-203ENST00000553353 FBXW7Q969H0 707 aa7.52□□□□□ -1.21
FOXN3-203ENST00000553353 RABGEF1Q9UJ41 708 aa7.52□□□□□ -1.21
FOXN3-203ENST00000553353 ERCC6Q03468 1493 aa7.51□□□□□ -1.21
FOXN3-203ENST00000553353 EMILIN3Q9NT22 766 aa7.51□□□□□ -1.21
FOXN3-203ENST00000553353 PCDHGA10Q9Y5H3 936 aa7.51□□□□□ -1.21
FOXN3-203ENST00000553353 PHF14O94880 888 aa7.5□□□□□ -1.21
FOXN3-203ENST00000553353 TYW1BQ6NUM6 668 aa7.49□□□□□ -1.21
FOXN3-203ENST00000553353 LAPTM4BQ86VI4 370 aa7.49□□□□□ -1.21
FOXN3-203ENST00000553353 SCRIBQ14160 1630 aa7.49□□□□□ -1.21
FOXN3-203ENST00000553353 ONECUT3O60422 494 aaPredicted RBP7.48□□□□□ -1.21
FOXN3-203ENST00000553353 ANKK1Q8NFD2 765 aa7.48□□□□□ -1.21
FOXN3-203ENST00000553353 A0A0G2JS52 829 aa7.47□□□□□ -1.21
FOXN3-203ENST00000553353 NYAP1Q6ZVC0 841 aa7.46□□□□□ -1.22
FOXN3-203ENST00000553353 EPAS1Q99814 870 aa7.46□□□□□ -1.22
FOXN3-203ENST00000553353 COL9A1P20849 921 aa7.45□□□□□ -1.22
FOXN3-203ENST00000553353 CAMK2BQ13554 666 aa7.45□□□□□ -1.22
FOXN3-203ENST00000553353 PROX2Q3B8N5 592 aa7.45□□□□□ -1.22
FOXN3-203ENST00000553353 DCAF1Q9Y4B6 1507 aa7.45□□□□□ -1.22
FOXN3-203ENST00000553353 CADPS2Q86UW7 1296 aa7.44□□□□□ -1.22
FOXN3-203ENST00000553353 NCAPD3P42695 1498 aa7.43□□□□□ -1.22
FOXN3-203ENST00000553353 SOWAHBA6NEL2 793 aa7.43□□□□□ -1.22
FOXN3-203ENST00000553353 ITGBL1O95965 494 aaPredicted RBP7.43□□□□□ -1.22
FOXN3-203ENST00000553353 C6orf132Q5T0Z8 1188 aa7.42□□□□□ -1.22
FOXN3-203ENST00000553353 ZFRQ96KR1 1074 aaKnown RBP7.42□□□□□ -1.22
FOXN3-203ENST00000553353 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
FOXN3-203ENST00000553353 KIAA1468Q9P260 1216 aa7.42□□□□□ -1.22
FOXN3-203ENST00000553353 NESP48681 1621 aa7.41□□□□□ -1.22
FOXN3-203ENST00000553353 ZCCHC6Q5VYS8 1495 aaKnown RBP7.4□□□□□ -1.22
FOXN3-203ENST00000553353 THOC2Q8NI27 1593 aaKnown RBP7.39□□□□□ -1.23
FOXN3-203ENST00000553353 TRIM6-TRIM34B2RNG4 842 aa7.39□□□□□ -1.23
FOXN3-203ENST00000553353 DPYSL4O14531 572 aa7.39□□□□□ -1.23
FOXN3-203ENST00000553353 BCAMP50895 628 aa7.39□□□□□ -1.23
FOXN3-203ENST00000553353 FAM98CQ17RN3 349 aaKnown RBP7.38□□□□□ -1.23
FOXN3-203ENST00000553353 KCNC4Q03721 635 aa7.36□□□□□ -1.23
FOXN3-203ENST00000553353 WBP1LQ9NX94 342 aa7.36□□□□□ -1.23
FOXN3-203ENST00000553353 PACS2Q86VP3 889 aa7.35□□□□□ -1.23
FOXN3-203ENST00000553353 BBXQ8WY36 941 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-203ENST00000553353 DDX12PQ92771 950 aa7.35□□□□□ -1.23
FOXN3-203ENST00000553353 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-203ENST00000553353 SEPT9Q9UHD8 586 aaPredicted RBP7.35□□□□□ -1.23
FOXN3-203ENST00000553353 TSR3Q9UJK0 312 aaKnown RBP7.35□□□□□ -1.23
FOXN3-203ENST00000553353 SPDYE16A6NNV3 312 aaPredicted RBP7.34□□□□□ -1.23
FOXN3-203ENST00000553353 EN1Q05925 392 aaPredicted RBP7.34□□□□□ -1.23
FOXN3-203ENST00000553353 RBM33Q96EV2 1170 aaKnown RBP7.34□□□□□ -1.23
FOXN3-203ENST00000553353 LRCH3Q96II8 777 aa7.34□□□□□ -1.23
FOXN3-203ENST00000553353 PDIA6Q15084 440 aa7.33□□□□□ -1.24
FOXN3-203ENST00000553353 NBR1Q14596 966 aa7.32□□□□□ -1.24
FOXN3-203ENST00000553353 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
FOXN3-203ENST00000553353 ATAD2BQ9ULI0 1458 aa7.31□□□□□ -1.24
FOXN3-203ENST00000553353 MAP3K7O43318 606 aa7.31□□□□□ -1.24
FOXN3-203ENST00000553353 HPS5Q9UPZ3 1129 aa7.31□□□□□ -1.24
FOXN3-203ENST00000553353 TSKSQ9UJT2 592 aa7.3□□□□□ -1.24
FOXN3-203ENST00000553353 PPP4CP60510 307 aa7.29□□□□□ -1.24
FOXN3-203ENST00000553353 TSR1Q2NL82 804 aaKnown RBP7.28□□□□□ -1.24
FOXN3-203ENST00000553353 SPRYD3Q8NCJ5 442 aa7.28□□□□□ -1.24
FOXN3-203ENST00000553353 ARIH1Q9Y4X5 557 aaPredicted RBP7.28□□□□□ -1.24
FOXN3-203ENST00000553353 PRSS12P56730 875 aa7.27□□□□□ -1.25
FOXN3-203ENST00000553353 LAPTM4AQ15012 233 aa7.27□□□□□ -1.25
FOXN3-203ENST00000553353 CDCA7LQ96GN5 454 aa7.27□□□□□ -1.25
FOXN3-203ENST00000553353 E2F4Q16254 413 aa7.26□□□□□ -1.25
FOXN3-203ENST00000553353 Q6ZNB5 142 aa7.25□□□□□ -1.25
FOXN3-203ENST00000553353 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.25□□□□□ -1.25
FOXN3-203ENST00000553353 HMGXB3Q12766 1538 aa7.24□□□□□ -1.25
FOXN3-203ENST00000553353 NBPF26B4DH59 902 aa7.24□□□□□ -1.25
FOXN3-203ENST00000553353 HDGFP51858 240 aaKnown RBP7.24□□□□□ -1.25
FOXN3-203ENST00000553353 SAMD7Q7Z3H4 446 aa7.24□□□□□ -1.25
FOXN3-203ENST00000553353 WDR70Q9NW82 654 aa7.24□□□□□ -1.25
FOXN3-203ENST00000553353 RBM27Q9P2N5 1060 aaKnown RBP7.24□□□□□ -1.25
FOXN3-203ENST00000553353 SMARCA2P51531 1590 aa7.24□□□□□ -1.25
FOXN3-203ENST00000553353 TJAP1Q5JTD0 557 aa7.23□□□□□ -1.25
FOXN3-203ENST00000553353 NECTIN2Q92692 538 aa7.23□□□□□ -1.25
FOXN3-203ENST00000553353 TATDN2Q93075 761 aa7.23□□□□□ -1.25
FOXN3-203ENST00000553353 PDS5BQ9NTI5 1447 aa7.22□□□□□ -1.25
FOXN3-203ENST00000553353 BAZ1AQ9NRL2 1556 aaPredicted RBP7.21□□□□□ -1.25
FOXN3-203ENST00000553353 RIMBP3CA6NJZ7 1639 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 RIMBP3BA6NNM3 1639 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 RIMBP3Q9UFD9 1639 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 GRXCR2A6NFK2 248 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 IL21Q9HBE4 155 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 FAM198AQ9UFP1 575 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 PNMA3Q9UL41 463 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 ARHGEF11O15085 1522 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 WDR62O43379 1518 aa7.21□□□□□ -1.26
FOXN3-203ENST00000553353 LAMC3Q9Y6N6 1575 aa7.2□□□□□ -1.26
FOXN3-203ENST00000553353 SMAPO00193 183 aa7.2□□□□□ -1.26
FOXN3-203ENST00000553353 MRC2Q9UBG0 1479 aa7.19□□□□□ -1.26
FOXN3-203ENST00000553353 OSBPP22059 807 aa7.19□□□□□ -1.26
FOXN3-203ENST00000553353 MTRQ99707 1265 aa7.19□□□□□ -1.26
FOXN3-203ENST00000553353 PRIM1P49642 420 aaKnown RBP7.18□□□□□ -1.26
FOXN3-203ENST00000553353 NUDT18Q6ZVK8 323 aa7.18□□□□□ -1.26
FOXN3-203ENST00000553353 V9GY48 417 aaPredicted RBP7.18□□□□□ -1.26
FOXN3-203ENST00000553353 GFRA3O60609 400 aa7.17□□□□□ -1.26
FOXN3-203ENST00000553353 CYB5RLQ6IPT4 315 aa7.17□□□□□ -1.26
FOXN3-203ENST00000553353 C3orf80F5H4A9 247 aa7.16□□□□□ -1.26
FOXN3-203ENST00000553353 PPP1R18Q6NYC8 613 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms