RNA–Protein interactions for RNA: ENST00000553175.5

LETMD1-237, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-237ENST00000553175 CAMK2BQ13554 666 aa11.96□□□□□ -0.49
LETMD1-237ENST00000553175 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
LETMD1-237ENST00000553175 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
LETMD1-237ENST00000553175 LAPTM4BQ86VI4 370 aa11.94□□□□□ -0.5
LETMD1-237ENST00000553175 BCAMP50895 628 aa11.93□□□□□ -0.5
LETMD1-237ENST00000553175 KIAA1468Q9P260 1216 aa11.93□□□□□ -0.5
LETMD1-237ENST00000553175 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
LETMD1-237ENST00000553175 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
LETMD1-237ENST00000553175 C6orf132Q5T0Z8 1188 aa11.92□□□□□ -0.5
LETMD1-237ENST00000553175 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
LETMD1-237ENST00000553175 IRX2Q9BZI1 471 aaPredicted RBP11.91□□□□□ -0.5
LETMD1-237ENST00000553175 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
LETMD1-237ENST00000553175 EPAS1Q99814 870 aa11.89□□□□□ -0.51
LETMD1-237ENST00000553175 DPYSL4O14531 572 aa11.87□□□□□ -0.51
LETMD1-237ENST00000553175 WBP1LQ9NX94 342 aa11.86□□□□□ -0.51
LETMD1-237ENST00000553175 SEPT9Q9UHD8 586 aaPredicted RBP11.85□□□□□ -0.51
LETMD1-237ENST00000553175 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
LETMD1-237ENST00000553175 DCAF8L2P0C7V8 631 aa11.83□□□□□ -0.52
LETMD1-237ENST00000553175 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
LETMD1-237ENST00000553175 RBM33Q96EV2 1170 aaKnown RBP11.81□□□□□ -0.52
LETMD1-237ENST00000553175 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
LETMD1-237ENST00000553175 DDX12PQ92771 950 aa11.8□□□□□ -0.52
LETMD1-237ENST00000553175 KCNC4Q03721 635 aa11.77□□□□□ -0.53
LETMD1-237ENST00000553175 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
LETMD1-237ENST00000553175 TSR3Q9UJK0 312 aaKnown RBP11.76□□□□□ -0.53
LETMD1-237ENST00000553175 TSR1Q2NL82 804 aaKnown RBP11.75□□□□□ -0.53
LETMD1-237ENST00000553175 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-237ENST00000553175 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.74□□□□□ -0.53
LETMD1-237ENST00000553175 HPS5Q9UPZ3 1129 aa11.73□□□□□ -0.53
LETMD1-237ENST00000553175 PDIA6Q15084 440 aa11.72□□□□□ -0.53
LETMD1-237ENST00000553175 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
LETMD1-237ENST00000553175 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
LETMD1-237ENST00000553175 NBR1Q14596 966 aa11.7□□□□□ -0.54
LETMD1-237ENST00000553175 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
LETMD1-237ENST00000553175 FAM198AQ9UFP1 575 aa11.7□□□□□ -0.54
LETMD1-237ENST00000553175 C3orf80F5H4A9 247 aa11.69□□□□□ -0.54
LETMD1-237ENST00000553175 MAP3K7O43318 606 aa11.68□□□□□ -0.54
LETMD1-237ENST00000553175 BBXQ8WY36 941 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-237ENST00000553175 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
LETMD1-237ENST00000553175 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
LETMD1-237ENST00000553175 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
LETMD1-237ENST00000553175 SMAPO00193 183 aa11.65□□□□□ -0.54
LETMD1-237ENST00000553175 PRSS12P56730 875 aa11.64□□□□□ -0.55
LETMD1-237ENST00000553175 PPP4CP60510 307 aa11.64□□□□□ -0.55
LETMD1-237ENST00000553175 Q6ZNB5 142 aa11.64□□□□□ -0.55
LETMD1-237ENST00000553175 LCE2BO14633 110 aa11.63□□□□□ -0.55
LETMD1-237ENST00000553175 SAMD7Q7Z3H4 446 aa11.63□□□□□ -0.55
LETMD1-237ENST00000553175 ARIH1Q9Y4X5 557 aaPredicted RBP11.62□□□□□ -0.55
LETMD1-237ENST00000553175 TATDN2Q93075 761 aa11.59□□□□□ -0.55
LETMD1-237ENST00000553175 E2F4Q16254 413 aa11.58□□□□□ -0.56
LETMD1-237ENST00000553175 CERKQ8TCT0 537 aa11.58□□□□□ -0.56
LETMD1-237ENST00000553175 OSBPP22059 807 aa11.57□□□□□ -0.56
LETMD1-237ENST00000553175 MTRQ99707 1265 aa11.56□□□□□ -0.56
LETMD1-237ENST00000553175 GRXCR2A6NFK2 248 aa11.55□□□□□ -0.56
LETMD1-237ENST00000553175 LAPTM4AQ15012 233 aa11.55□□□□□ -0.56
LETMD1-237ENST00000553175 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
LETMD1-237ENST00000553175 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
LETMD1-237ENST00000553175 GFRA3O60609 400 aa11.54□□□□□ -0.56
LETMD1-237ENST00000553175 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
LETMD1-237ENST00000553175 PPP1R18Q6NYC8 613 aa11.53□□□□□ -0.56
LETMD1-237ENST00000553175 ZNF516Q92618 1163 aa11.53□□□□□ -0.56
LETMD1-237ENST00000553175 IL21Q9HBE4 155 aa11.53□□□□□ -0.56
LETMD1-237ENST00000553175 NUDT18Q6ZVK8 323 aa11.52□□□□□ -0.57
LETMD1-237ENST00000553175 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
LETMD1-237ENST00000553175 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
LETMD1-237ENST00000553175 NBPF26B4DH59 902 aa11.51□□□□□ -0.57
LETMD1-237ENST00000553175 NPDC1Q9NQX5 325 aaPredicted RBP11.51□□□□□ -0.57
LETMD1-237ENST00000553175 APLP1P51693 650 aa11.5□□□□□ -0.57
LETMD1-237ENST00000553175 RBM27Q9P2N5 1060 aaKnown RBP11.5□□□□□ -0.57
LETMD1-237ENST00000553175 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
LETMD1-237ENST00000553175 V9GY48 417 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-237ENST00000553175 NKX2-3Q8TAU0 364 aa11.46□□□□□ -0.57
LETMD1-237ENST00000553175 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
LETMD1-237ENST00000553175 NRG2O14511 850 aaPredicted RBP11.44□□□□□ -0.58
LETMD1-237ENST00000553175 WDR70Q9NW82 654 aa11.43□□□□□ -0.58
LETMD1-237ENST00000553175 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
LETMD1-237ENST00000553175 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
LETMD1-237ENST00000553175 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.42□□□□□ -0.58
LETMD1-237ENST00000553175 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
LETMD1-237ENST00000553175 EYA1Q99502 592 aa11.41□□□□□ -0.58
LETMD1-237ENST00000553175 RNF40O75150 1001 aa11.4□□□□□ -0.58
LETMD1-237ENST00000553175 PAXIP1Q6ZW49 1069 aaPredicted RBP11.39□□□□□ -0.59
LETMD1-237ENST00000553175 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
LETMD1-237ENST00000553175 COPS2P61201 443 aa11.36□□□□□ -0.59
LETMD1-237ENST00000553175 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
LETMD1-237ENST00000553175 ZPR1O75312 459 aa11.34□□□□□ -0.59
LETMD1-237ENST00000553175 NECTIN2Q92692 538 aa11.34□□□□□ -0.59
LETMD1-237ENST00000553175 TMUB1Q9BVT8 246 aa11.34□□□□□ -0.59
LETMD1-237ENST00000553175 PDZRN3Q9UPQ7 1066 aa11.33□□□□□ -0.6
LETMD1-237ENST00000553175 EMID1Q96A84 441 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-237ENST00000553175 MLLT3P42568 568 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-237ENST00000553175 GGCXP38435 758 aa11.29□□□□□ -0.6
LETMD1-237ENST00000553175 TRIM67Q6ZTA4 783 aa11.29□□□□□ -0.6
LETMD1-237ENST00000553175 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
LETMD1-237ENST00000553175 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
LETMD1-237ENST00000553175 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
LETMD1-237ENST00000553175 PTGDRQ13258 359 aa11.25□□□□□ -0.61
LETMD1-237ENST00000553175 ZNF787Q6DD87 383 aa11.25□□□□□ -0.61
LETMD1-237ENST00000553175 ARHGEF1Q92888 912 aaKnown RBP11.23□□□□□ -0.61
LETMD1-237ENST00000553175 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms