RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
USP15-218ENST00000552346 WNT2BQ93097 391 aa13.02□□□□□ -0.33
USP15-218ENST00000552346 COL9A1P20849 921 aa13.01□□□□□ -0.33
USP15-218ENST00000552346 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.01□□□□□ -0.33
USP15-218ENST00000552346 PROX2Q3B8N5 592 aa13□□□□□ -0.33
USP15-218ENST00000552346 EPAS1Q99814 870 aa12.99□□□□□ -0.33
USP15-218ENST00000552346 RABGEF1Q9UJ41 708 aa12.98□□□□□ -0.33
USP15-218ENST00000552346 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
USP15-218ENST00000552346 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
USP15-218ENST00000552346 DDX12PQ92771 950 aa12.94□□□□□ -0.34
USP15-218ENST00000552346 RBM33Q96EV2 1170 aaKnown RBP12.93□□□□□ -0.34
USP15-218ENST00000552346 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
USP15-218ENST00000552346 KIAA1468Q9P260 1216 aa12.91□□□□□ -0.34
USP15-218ENST00000552346 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
USP15-218ENST00000552346 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.34
USP15-218ENST00000552346 PDIA6Q15084 440 aa12.89□□□□□ -0.35
USP15-218ENST00000552346 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
USP15-218ENST00000552346 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
USP15-218ENST00000552346 NBR1Q14596 966 aa12.87□□□□□ -0.35
USP15-218ENST00000552346 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
USP15-218ENST00000552346 E2F4Q16254 413 aa12.86□□□□□ -0.35
USP15-218ENST00000552346 TRIM6-TRIM34B2RNG4 842 aa12.85□□□□□ -0.35
USP15-218ENST00000552346 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
USP15-218ENST00000552346 MAP3K7O43318 606 aa12.84□□□□□ -0.35
USP15-218ENST00000552346 BCAMP50895 628 aa12.84□□□□□ -0.35
USP15-218ENST00000552346 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
USP15-218ENST00000552346 ZFRQ96KR1 1074 aaKnown RBP12.84□□□□□ -0.35
USP15-218ENST00000552346 WDR70Q9NW82 654 aa12.84□□□□□ -0.35
USP15-218ENST00000552346 SEPT9Q9UHD8 586 aaPredicted RBP12.84□□□□□ -0.35
USP15-218ENST00000552346 SOWAHBA6NEL2 793 aa12.82□□□□□ -0.36
USP15-218ENST00000552346 TSR1Q2NL82 804 aaKnown RBP12.81□□□□□ -0.36
USP15-218ENST00000552346 FAM98CQ17RN3 349 aaKnown RBP12.78□□□□□ -0.36
USP15-218ENST00000552346 ARIH1Q9Y4X5 557 aaPredicted RBP12.78□□□□□ -0.36
USP15-218ENST00000552346 A0A0G2JS52 829 aa12.76□□□□□ -0.37
USP15-218ENST00000552346 PACS2Q86VP3 889 aa12.76□□□□□ -0.37
USP15-218ENST00000552346 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
USP15-218ENST00000552346 GRXCR2A6NFK2 248 aa12.75□□□□□ -0.37
USP15-218ENST00000552346 NYAP1Q6ZVC0 841 aa12.74□□□□□ -0.37
USP15-218ENST00000552346 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
USP15-218ENST00000552346 RGS20O76081 388 aa12.73□□□□□ -0.37
USP15-218ENST00000552346 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.73□□□□□ -0.37
USP15-218ENST00000552346 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
USP15-218ENST00000552346 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
USP15-218ENST00000552346 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
USP15-218ENST00000552346 CDCA7LQ96GN5 454 aa12.71□□□□□ -0.37
USP15-218ENST00000552346 CERKQ8TCT0 537 aa12.7□□□□□ -0.38
USP15-218ENST00000552346 TSR3Q9UJK0 312 aaKnown RBP12.7□□□□□ -0.38
USP15-218ENST00000552346 PRSS12P56730 875 aa12.69□□□□□ -0.38
USP15-218ENST00000552346 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
USP15-218ENST00000552346 OSBPP22059 807 aa12.67□□□□□ -0.38
USP15-218ENST00000552346 SMAPO00193 183 aa12.66□□□□□ -0.38
USP15-218ENST00000552346 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
USP15-218ENST00000552346 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
USP15-218ENST00000552346 KCNC4Q03721 635 aa12.63□□□□□ -0.39
USP15-218ENST00000552346 NBPF26B4DH59 902 aa12.62□□□□□ -0.39
USP15-218ENST00000552346 TATDN2Q93075 761 aa12.62□□□□□ -0.39
USP15-218ENST00000552346 PNMA3Q9UL41 463 aa12.62□□□□□ -0.39
USP15-218ENST00000552346 C3orf80F5H4A9 247 aa12.61□□□□□ -0.39
USP15-218ENST00000552346 PPP4CP60510 307 aa12.61□□□□□ -0.39
USP15-218ENST00000552346 SAMD7Q7Z3H4 446 aa12.61□□□□□ -0.39
USP15-218ENST00000552346 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
USP15-218ENST00000552346 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
USP15-218ENST00000552346 RBM27Q9P2N5 1060 aaKnown RBP12.58□□□□□ -0.4
USP15-218ENST00000552346 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
USP15-218ENST00000552346 ARHGEF1Q92888 912 aaKnown RBP12.53□□□□□ -0.4
USP15-218ENST00000552346 NPDC1Q9NQX5 325 aaPredicted RBP12.53□□□□□ -0.4
USP15-218ENST00000552346 HDGFP51858 240 aaKnown RBP12.52□□□□□ -0.41
USP15-218ENST00000552346 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
USP15-218ENST00000552346 RNF40O75150 1001 aa12.51□□□□□ -0.41
USP15-218ENST00000552346 TTC13Q8NBP0 860 aa12.51□□□□□ -0.41
USP15-218ENST00000552346 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
USP15-218ENST00000552346 KCNV2Q8TDN2 545 aa12.49□□□□□ -0.41
USP15-218ENST00000552346 TJAP1Q5JTD0 557 aa12.48□□□□□ -0.41
USP15-218ENST00000552346 MTRQ99707 1265 aa12.46□□□□□ -0.41
USP15-218ENST00000552346 IL21Q9HBE4 155 aa12.45□□□□□ -0.42
USP15-218ENST00000552346 SWT1Q5T5J6 900 aaKnown RBP12.44□□□□□ -0.42
USP15-218ENST00000552346 APLP1P51693 650 aa12.43□□□□□ -0.42
USP15-218ENST00000552346 SLF2Q8IX21 1173 aa12.42□□□□□ -0.42
USP15-218ENST00000552346 NECTIN2Q92692 538 aa12.41□□□□□ -0.42
USP15-218ENST00000552346 EYA1Q99502 592 aa12.41□□□□□ -0.42
USP15-218ENST00000552346 SLC4A3P48751 1232 aa12.38□□□□□ -0.43
USP15-218ENST00000552346 PTGDRQ13258 359 aa12.38□□□□□ -0.43
USP15-218ENST00000552346 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
USP15-218ENST00000552346 P3H3Q8IVL6 736 aa12.36□□□□□ -0.43
USP15-218ENST00000552346 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
USP15-218ENST00000552346 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
USP15-218ENST00000552346 COPS2P61201 443 aa12.33□□□□□ -0.44
USP15-218ENST00000552346 Q6ZNB5 142 aa12.33□□□□□ -0.44
USP15-218ENST00000552346 DNAJB2P25686 324 aa12.32□□□□□ -0.44
USP15-218ENST00000552346 PRKD2Q9BZL6 878 aa12.32□□□□□ -0.44
USP15-218ENST00000552346 NKX2-3Q8TAU0 364 aa12.31□□□□□ -0.44
USP15-218ENST00000552346 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
USP15-218ENST00000552346 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
USP15-218ENST00000552346 SEMA3EO15041 775 aa12.3□□□□□ -0.44
USP15-218ENST00000552346 ADGRG1Q9Y653 693 aa12.3□□□□□ -0.44
USP15-218ENST00000552346 PRR14Q9BWN1 585 aa12.29□□□□□ -0.44
USP15-218ENST00000552346 LAPTM4AQ15012 233 aa12.28□□□□□ -0.44
USP15-218ENST00000552346 FCHSD2O94868 740 aa12.27□□□□□ -0.45
USP15-218ENST00000552346 FAM161AQ3B820 660 aa12.27□□□□□ -0.45
USP15-218ENST00000552346 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms