RNA–Protein interactions for RNA: ENST00000546964.5

PFKM-206, Transcript of phosphofructokinase, muscle, humanhuman

TSL 1 (best)

Gene PFKM, Length 3,063 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-206ENST00000546964 TMX1Q9H3N1 280 aa13.98□□□□□ -0.17
PFKM-206ENST00000546964 L1TD1Q5T7N2 865 aaKnown RBP13.97□□□□□ -0.17
PFKM-206ENST00000546964 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
PFKM-206ENST00000546964 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
PFKM-206ENST00000546964 ARID4AP29374 1257 aaPredicted RBP13.96□□□□□ -0.17
PFKM-206ENST00000546964 DNAJC14Q6Y2X3 702 aaPredicted RBP13.95□□□□□ -0.18
PFKM-206ENST00000546964 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
PFKM-206ENST00000546964 GTPBP4Q9BZE4 634 aaKnown RBP13.95□□□□□ -0.18
PFKM-206ENST00000546964 HMGB1P09429 215 aaKnown RBP13.95□□□□□ -0.18
PFKM-206ENST00000546964 ZNF771Q7L3S4 317 aaPredicted RBP13.94□□□□□ -0.18
PFKM-206ENST00000546964 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
PFKM-206ENST00000546964 DNAJC21Q5F1R6 531 aaKnown RBP13.93□□□□□ -0.18
PFKM-206ENST00000546964 CALR3Q96L12 384 aaKnown RBP13.93□□□□□ -0.18
PFKM-206ENST00000546964 ARMCX6Q7L4S7 300 aa13.93□□□□□ -0.18
PFKM-206ENST00000546964 GEMIN8Q9NWZ8 242 aaKnown RBP13.93□□□□□ -0.18
PFKM-206ENST00000546964 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
PFKM-206ENST00000546964 UQCRHLA0A096LP55 91 aa13.92□□□□□ -0.18
PFKM-206ENST00000546964 ZBTB7CA1YPR0 619 aa13.92□□□□□ -0.18
PFKM-206ENST00000546964 UQCRHP07919 91 aa13.92□□□□□ -0.18
PFKM-206ENST00000546964 FBLN2P98095 1184 aa13.92□□□□□ -0.18
PFKM-206ENST00000546964 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
PFKM-206ENST00000546964 CCDC94Q9BW85 323 aaPredicted RBP13.92□□□□□ -0.18
PFKM-206ENST00000546964 SPDYE4A6NLX3 237 aa13.92□□□□□ -0.18
PFKM-206ENST00000546964 JARID2Q92833 1246 aaPredicted RBP13.92□□□□□ -0.18
PFKM-206ENST00000546964 SIRT1Q96EB6 747 aa13.91□□□□□ -0.18
PFKM-206ENST00000546964 NUTM2GQ5VZR2 741 aa13.9□□□□□ -0.18
PFKM-206ENST00000546964 CCDC27Q2M243 656 aa13.9□□□□□ -0.18
PFKM-206ENST00000546964 TAF3Q5VWG9 929 aa13.89□□□□□ -0.19
PFKM-206ENST00000546964 SGSM3Q96HU1 749 aa13.89□□□□□ -0.19
PFKM-206ENST00000546964 KDM2AQ9Y2K7 1162 aa13.89□□□□□ -0.19
PFKM-206ENST00000546964 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
PFKM-206ENST00000546964 TRIM44Q96DX7 344 aaPredicted RBP13.89□□□□□ -0.19
PFKM-206ENST00000546964 GOLGA6L3A6NEY3 463 aa13.88□□□□□ -0.19
PFKM-206ENST00000546964 PDE4AP27815 886 aa13.88□□□□□ -0.19
PFKM-206ENST00000546964 HSP90AB3PQ58FF7 597 aa13.87□□□□□ -0.19
PFKM-206ENST00000546964 TMTC2Q8N394 836 aa13.87□□□□□ -0.19
PFKM-206ENST00000546964 BORCS6Q96GS4 357 aa13.87□□□□□ -0.19
PFKM-206ENST00000546964 MAP2K1Q02750 393 aaPredicted RBP13.87□□□□□ -0.19
PFKM-206ENST00000546964 TSC1Q92574 1164 aa13.86□□□□□ -0.19
PFKM-206ENST00000546964 FAM212AQ96EL1 285 aa13.86□□□□□ -0.19
PFKM-206ENST00000546964 TOMM22Q9NS69 142 aa13.86□□□□□ -0.19
PFKM-206ENST00000546964 ATP2B3Q16720 1220 aa13.85□□□□□ -0.19
PFKM-206ENST00000546964 BICRAQ9NZM4 1560 aa13.85□□□□□ -0.19
PFKM-206ENST00000546964 POLD1P28340 1107 aa13.85□□□□□ -0.19
PFKM-206ENST00000546964 NBPF20Q3BBV1 942 aa13.85□□□□□ -0.19
PFKM-206ENST00000546964 KAT6BQ8WYB5 2073 aa13.85□□□□□ -0.19
PFKM-206ENST00000546964 TNNT3P45378 269 aaPredicted RBP13.84□□□□□ -0.19
PFKM-206ENST00000546964 MYH16Q9H6N6 1097 aa13.84□□□□□ -0.19
PFKM-206ENST00000546964 SETQ01105 290 aaPredicted RBP13.81□□□□□ -0.2
PFKM-206ENST00000546964 SKAP1Q86WV1 359 aa13.81□□□□□ -0.2
PFKM-206ENST00000546964 CEP83Q9Y592 693 aa13.81□□□□□ -0.2
PFKM-206ENST00000546964 SLC20A2Q08357 652 aa13.8□□□□□ -0.2
PFKM-206ENST00000546964 NBPF1Q3BBV0 1214 aa13.8□□□□□ -0.2
PFKM-206ENST00000546964 YY1AP1Q9H869 796 aa13.8□□□□□ -0.2
PFKM-206ENST00000546964 FAM177BA6PVY3 158 aa13.79□□□□□ -0.2
PFKM-206ENST00000546964 SATB1Q01826 763 aa13.79□□□□□ -0.2
PFKM-206ENST00000546964 NPM1P06748 294 aaKnown RBP eCLIP13.78□□□□□ -0.2
PFKM-206ENST00000546964 OFD1O75665 1012 aa13.78□□□□□ -0.2
PFKM-206ENST00000546964 NBPF11Q86T75 865 aa13.78□□□□□ -0.2
PFKM-206ENST00000546964 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.2
PFKM-206ENST00000546964 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.77□□□□□ -0.2
PFKM-206ENST00000546964 GTF2A1P52655 376 aaPredicted RBP13.77□□□□□ -0.21
PFKM-206ENST00000546964 CC2D2BQ6DHV5 1058 aa13.77□□□□□ -0.21
PFKM-206ENST00000546964 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.21
PFKM-206ENST00000546964 TTC36A6NLP5 189 aa13.76□□□□□ -0.21
PFKM-206ENST00000546964 RBM5P52756 815 aaKnown RBP eCLIP13.76□□□□□ -0.21
PFKM-206ENST00000546964 MAFGO15525 162 aa13.75□□□□□ -0.21
PFKM-206ENST00000546964 MTERF4Q7Z6M4 381 aaKnown RBP13.75□□□□□ -0.21
PFKM-206ENST00000546964 IPO8O15397 1037 aaKnown RBP13.75□□□□□ -0.21
PFKM-206ENST00000546964 ERICH4A6NGS2 130 aa13.74□□□□□ -0.21
PFKM-206ENST00000546964 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
PFKM-206ENST00000546964 BACH2Q9BYV9 841 aa13.74□□□□□ -0.21
PFKM-206ENST00000546964 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
PFKM-206ENST00000546964 MYCBPQ99417 103 aaPredicted RBP13.74□□□□□ -0.21
PFKM-206ENST00000546964 BIRC2Q13490 618 aa13.73□□□□□ -0.21
PFKM-206ENST00000546964 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.73□□□□□ -0.21
PFKM-206ENST00000546964 MPHOSPH10O00566 681 aaKnown RBP13.73□□□□□ -0.21
PFKM-206ENST00000546964 FOXD4L5Q5VV16 416 aaPredicted RBP13.73□□□□□ -0.21
PFKM-206ENST00000546964 FOXD4L4Q8WXT5 416 aaPredicted RBP13.73□□□□□ -0.21
PFKM-206ENST00000546964 TIGD1Q96MW7 591 aa13.73□□□□□ -0.21
PFKM-206ENST00000546964 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
PFKM-206ENST00000546964 SLKQ9H2G2 1235 aaPredicted RBP13.71□□□□□ -0.21
PFKM-206ENST00000546964 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.22
PFKM-206ENST00000546964 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.22
PFKM-206ENST00000546964 RSPH14Q9UHP6 348 aa13.7□□□□□ -0.22
PFKM-206ENST00000546964 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
PFKM-206ENST00000546964 PIAS4Q8N2W9 510 aaPredicted RBP13.7□□□□□ -0.22
PFKM-206ENST00000546964 OTUD6BQ8N6M0 293 aa13.7□□□□□ -0.22
PFKM-206ENST00000546964 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
PFKM-206ENST00000546964 CEP120Q8N960 986 aa13.7□□□□□ -0.22
PFKM-206ENST00000546964 TDO2P48775 406 aa13.69□□□□□ -0.22
PFKM-206ENST00000546964 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
PFKM-206ENST00000546964 ATL2Q8NHH9 583 aa13.69□□□□□ -0.22
PFKM-206ENST00000546964 GYS2P54840 703 aa13.68□□□□□ -0.22
PFKM-206ENST00000546964 DYNC1I1O14576 645 aa13.68□□□□□ -0.22
PFKM-206ENST00000546964 MSNP26038 577 aaKnown RBP13.68□□□□□ -0.22
PFKM-206ENST00000546964 GAS2L2Q8NHY3 880 aa13.68□□□□□ -0.22
PFKM-206ENST00000546964 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
PFKM-206ENST00000546964 NOL10Q9BSC4 688 aaKnown RBP13.67□□□□□ -0.22
PFKM-206ENST00000546964 PANK3Q9H999 370 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1509 ms