RNA–Protein interactions for RNA: ENST00000546248.5

TRDN-205, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-205ENST00000546248 PROX2Q3B8N5 592 aa11.47□□□□□ -0.57
TRDN-205ENST00000546248 MRPL50Q8N5N7 158 aaKnown RBP11.47□□□□□ -0.57
TRDN-205ENST00000546248 THSD4Q6ZMP0 1018 aa11.45□□□□□ -0.58
TRDN-205ENST00000546248 PAXIP1Q6ZW49 1069 aaPredicted RBP11.44□□□□□ -0.58
TRDN-205ENST00000546248 CFAP44Q96MT7 982 aa11.44□□□□□ -0.58
TRDN-205ENST00000546248 EPAS1Q99814 870 aa11.44□□□□□ -0.58
TRDN-205ENST00000546248 GOLGA8CPA6NN73 597 aa11.43□□□□□ -0.58
TRDN-205ENST00000546248 DDX12PQ92771 950 aa11.43□□□□□ -0.58
TRDN-205ENST00000546248 WNT2BQ93097 391 aa11.43□□□□□ -0.58
TRDN-205ENST00000546248 NBPF3Q9H094 633 aa11.43□□□□□ -0.58
TRDN-205ENST00000546248 C6orf132Q5T0Z8 1188 aa11.42□□□□□ -0.58
TRDN-205ENST00000546248 RABGEF1Q9UJ41 708 aa11.41□□□□□ -0.58
TRDN-205ENST00000546248 PDIA6Q15084 440 aa11.4□□□□□ -0.58
TRDN-205ENST00000546248 RBM33Q96EV2 1170 aaKnown RBP11.4□□□□□ -0.58
TRDN-205ENST00000546248 KIAA1468Q9P260 1216 aa11.37□□□□□ -0.59
TRDN-205ENST00000546248 E2F4Q16254 413 aa11.36□□□□□ -0.59
TRDN-205ENST00000546248 NBR1Q14596 966 aa11.35□□□□□ -0.59
TRDN-205ENST00000546248 EN1Q05925 392 aaPredicted RBP11.34□□□□□ -0.59
TRDN-205ENST00000546248 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
TRDN-205ENST00000546248 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
TRDN-205ENST00000546248 TRIM6-TRIM34B2RNG4 842 aa11.32□□□□□ -0.6
TRDN-205ENST00000546248 ONECUT3O60422 494 aaPredicted RBP11.32□□□□□ -0.6
TRDN-205ENST00000546248 ANKK1Q8NFD2 765 aa11.32□□□□□ -0.6
TRDN-205ENST00000546248 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
TRDN-205ENST00000546248 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
TRDN-205ENST00000546248 BCAMP50895 628 aa11.31□□□□□ -0.6
TRDN-205ENST00000546248 LAPTM4BQ86VI4 370 aa11.31□□□□□ -0.6
TRDN-205ENST00000546248 WDR70Q9NW82 654 aa11.31□□□□□ -0.6
TRDN-205ENST00000546248 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
TRDN-205ENST00000546248 MAP3K7O43318 606 aa11.3□□□□□ -0.6
TRDN-205ENST00000546248 ZFRQ96KR1 1074 aaKnown RBP11.29□□□□□ -0.6
TRDN-205ENST00000546248 SOWAHBA6NEL2 793 aa11.27□□□□□ -0.61
TRDN-205ENST00000546248 IFFO2Q5TF58 517 aa11.27□□□□□ -0.61
TRDN-205ENST00000546248 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
TRDN-205ENST00000546248 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
TRDN-205ENST00000546248 FAM98CQ17RN3 349 aaKnown RBP11.24□□□□□ -0.61
TRDN-205ENST00000546248 FAM198AQ9UFP1 575 aa11.23□□□□□ -0.61
TRDN-205ENST00000546248 OSBPP22059 807 aa11.22□□□□□ -0.61
TRDN-205ENST00000546248 WBP1LQ9NX94 342 aa11.22□□□□□ -0.61
TRDN-205ENST00000546248 CDCA7LQ96GN5 454 aa11.21□□□□□ -0.61
TRDN-205ENST00000546248 CDHR5Q9HBB8 845 aa11.21□□□□□ -0.61
TRDN-205ENST00000546248 A0A0G2JS52 829 aa11.2□□□□□ -0.62
TRDN-205ENST00000546248 PACS2Q86VP3 889 aa11.2□□□□□ -0.62
TRDN-205ENST00000546248 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
TRDN-205ENST00000546248 C3orf80F5H4A9 247 aa11.19□□□□□ -0.62
TRDN-205ENST00000546248 PRSS12P56730 875 aa11.19□□□□□ -0.62
TRDN-205ENST00000546248 SMAPO00193 183 aa11.18□□□□□ -0.62
TRDN-205ENST00000546248 ITGBL1O95965 494 aaPredicted RBP11.18□□□□□ -0.62
TRDN-205ENST00000546248 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.18□□□□□ -0.62
TRDN-205ENST00000546248 LRCH3Q96II8 777 aa11.17□□□□□ -0.62
TRDN-205ENST00000546248 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
TRDN-205ENST00000546248 NYAP1Q6ZVC0 841 aa11.15□□□□□ -0.62
TRDN-205ENST00000546248 CERKQ8TCT0 537 aa11.15□□□□□ -0.62
TRDN-205ENST00000546248 TSR3Q9UJK0 312 aaKnown RBP11.15□□□□□ -0.62
TRDN-205ENST00000546248 TATDN2Q93075 761 aa11.12□□□□□ -0.63
TRDN-205ENST00000546248 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
TRDN-205ENST00000546248 RGS20O76081 388 aa11.11□□□□□ -0.63
TRDN-205ENST00000546248 SAMD7Q7Z3H4 446 aa11.11□□□□□ -0.63
TRDN-205ENST00000546248 NPDC1Q9NQX5 325 aaPredicted RBP11.11□□□□□ -0.63
TRDN-205ENST00000546248 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
TRDN-205ENST00000546248 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
TRDN-205ENST00000546248 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
TRDN-205ENST00000546248 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
TRDN-205ENST00000546248 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
TRDN-205ENST00000546248 RBM27Q9P2N5 1060 aaKnown RBP11.08□□□□□ -0.64
TRDN-205ENST00000546248 PPP4CP60510 307 aa11.07□□□□□ -0.64
TRDN-205ENST00000546248 KCNC4Q03721 635 aa11.07□□□□□ -0.64
TRDN-205ENST00000546248 TTC13Q8NBP0 860 aa11.07□□□□□ -0.64
TRDN-205ENST00000546248 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
TRDN-205ENST00000546248 PADI6Q6TGC4 694 aa11.06□□□□□ -0.64
TRDN-205ENST00000546248 TJAP1Q5JTD0 557 aa11□□□□□ -0.65
TRDN-205ENST00000546248 RNF40O75150 1001 aa10.99□□□□□ -0.65
TRDN-205ENST00000546248 PLCB2Q00722 1185 aa10.99□□□□□ -0.65
TRDN-205ENST00000546248 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
TRDN-205ENST00000546248 SWT1Q5T5J6 900 aaKnown RBP10.98□□□□□ -0.65
TRDN-205ENST00000546248 MTRQ99707 1265 aa10.97□□□□□ -0.65
TRDN-205ENST00000546248 APLP1P51693 650 aa10.96□□□□□ -0.65
TRDN-205ENST00000546248 EYA1Q99502 592 aa10.96□□□□□ -0.65
TRDN-205ENST00000546248 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
TRDN-205ENST00000546248 PTGDRQ13258 359 aa10.95□□□□□ -0.66
TRDN-205ENST00000546248 ZNF516Q92618 1163 aa10.93□□□□□ -0.66
TRDN-205ENST00000546248 IL21Q9HBE4 155 aa10.93□□□□□ -0.66
TRDN-205ENST00000546248 SEMA3EO15041 775 aa10.91□□□□□ -0.66
TRDN-205ENST00000546248 P3H3Q8IVL6 736 aa10.91□□□□□ -0.66
TRDN-205ENST00000546248 SLF2Q8IX21 1173 aa10.91□□□□□ -0.66
TRDN-205ENST00000546248 NUTM2FA1L443 756 aa10.89□□□□□ -0.67
TRDN-205ENST00000546248 FAM161AQ3B820 660 aa10.88□□□□□ -0.67
TRDN-205ENST00000546248 ADGRG1Q9Y653 693 aa10.88□□□□□ -0.67
TRDN-205ENST00000546248 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
TRDN-205ENST00000546248 COPS2P61201 443 aa10.86□□□□□ -0.67
TRDN-205ENST00000546248 PPP1R18Q6NYC8 613 aa10.86□□□□□ -0.67
TRDN-205ENST00000546248 NKX2-3Q8TAU0 364 aa10.86□□□□□ -0.67
TRDN-205ENST00000546248 NECTIN2Q92692 538 aa10.86□□□□□ -0.67
TRDN-205ENST00000546248 DNAJB2P25686 324 aa10.85□□□□□ -0.67
TRDN-205ENST00000546248 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
TRDN-205ENST00000546248 TMEM134Q9H6X4 195 aa10.83□□□□□ -0.68
TRDN-205ENST00000546248 FCHSD2O94868 740 aa10.82□□□□□ -0.68
TRDN-205ENST00000546248 RCCD1A6NED2 376 aa10.81□□□□□ -0.68
TRDN-205ENST00000546248 SLC4A3P48751 1232 aa10.81□□□□□ -0.68
TRDN-205ENST00000546248 PRKD2Q9BZL6 878 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms