RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 MYOM3Q5VTT5 1437 aa8.02□□□□□ -1.13
PDE4D-226ENST00000546160 GBP4Q96PP9 640 aa8.02□□□□□ -1.13
PDE4D-226ENST00000546160 NOP58Q9Y2X3 529 aaKnown RBP8.02□□□□□ -1.13
PDE4D-226ENST00000546160 ARHGAP5Q13017 1502 aa8.02□□□□□ -1.13
PDE4D-226ENST00000546160 RCAN3Q9UKA8 241 aa8.02□□□□□ -1.13
PDE4D-226ENST00000546160 KIF3AQ9Y496 699 aa8.01□□□□□ -1.13
PDE4D-226ENST00000546160 CGNL1Q0VF96 1302 aa8.01□□□□□ -1.13
PDE4D-226ENST00000546160 EVA1CP58658 441 aa8.01□□□□□ -1.13
PDE4D-226ENST00000546160 C1orf141Q5JVX7 400 aa8.01□□□□□ -1.13
PDE4D-226ENST00000546160 PLCB2Q00722 1185 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 ITPRIPQ8IWB1 547 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 GRIN2BQ13224 1484 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 CLSTN1O94985 981 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 NLRP13Q86W25 1043 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 DRC7Q8IY82 874 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 HMGXB3Q12766 1538 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 MIA2Q96PC5 1412 aa8□□□□□ -1.13
PDE4D-226ENST00000546160 ANO8Q9HCE9 1232 aaPredicted RBP8□□□□□ -1.13
PDE4D-226ENST00000546160 MSNP26038 577 aaKnown RBP7.99□□□□□ -1.13
PDE4D-226ENST00000546160 NGEFQ8N5V2 710 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 SMC4Q9NTJ3 1288 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 CHMP3Q9Y3E7 222 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 SYNJ2O15056 1496 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 USP35Q9P2H5 1018 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 COG3Q96JB2 828 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 ROCK1Q13464 1354 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 FYCO1Q9BQS8 1478 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 RRBP1Q9P2E9 1410 aaKnown RBP7.99□□□□□ -1.13
PDE4D-226ENST00000546160 PLEKHH2Q8IVE3 1493 aa7.99□□□□□ -1.13
PDE4D-226ENST00000546160 TOP2BQ02880 1626 aa7.98□□□□□ -1.13
PDE4D-226ENST00000546160 KANK4Q5T7N3 995 aaPredicted RBP7.98□□□□□ -1.13
PDE4D-226ENST00000546160 MRC2Q9UBG0 1479 aa7.98□□□□□ -1.13
PDE4D-226ENST00000546160 TPRNQ4KMQ1 711 aa7.98□□□□□ -1.13
PDE4D-226ENST00000546160 TAOK2Q9UL54 1235 aa7.98□□□□□ -1.13
PDE4D-226ENST00000546160 LAMC3Q9Y6N6 1575 aa7.98□□□□□ -1.13
PDE4D-226ENST00000546160 TCERG1O14776 1098 aaKnown RBP7.98□□□□□ -1.13
PDE4D-226ENST00000546160 PHF14O94880 888 aa7.98□□□□□ -1.13
PDE4D-226ENST00000546160 FOXD1Q16676 465 aa7.98□□□□□ -1.13
PDE4D-226ENST00000546160 NCAPD3P42695 1498 aa7.97□□□□□ -1.13
PDE4D-226ENST00000546160 EHBP1L1Q8N3D4 1523 aa7.97□□□□□ -1.13
PDE4D-226ENST00000546160 ZNF330Q9Y3S2 320 aaPredicted RBP7.97□□□□□ -1.13
PDE4D-226ENST00000546160 GTF2E1P29083 439 aaPredicted RBP7.97□□□□□ -1.13
PDE4D-226ENST00000546160 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.13
PDE4D-226ENST00000546160 DNMBPQ6XZF7 1577 aa7.96□□□□□ -1.13
PDE4D-226ENST00000546160 MYBBP1AQ9BQG0 1328 aaKnown RBP7.96□□□□□ -1.13
PDE4D-226ENST00000546160 AMOTL1Q8IY63 956 aa7.96□□□□□ -1.13
PDE4D-226ENST00000546160 SCAPERQ9BY12 1400 aa7.96□□□□□ -1.14
PDE4D-226ENST00000546160 CENPJQ9HC77 1338 aaPredicted RBP7.96□□□□□ -1.14
PDE4D-226ENST00000546160 IFT140Q96RY7 1462 aa7.96□□□□□ -1.14
PDE4D-226ENST00000546160 B4GALNT3Q6L9W6 998 aa7.95□□□□□ -1.14
PDE4D-226ENST00000546160 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
PDE4D-226ENST00000546160 NOL10Q9BSC4 688 aaKnown RBP7.95□□□□□ -1.14
PDE4D-226ENST00000546160 FRAT2O75474 233 aaPredicted RBP7.95□□□□□ -1.14
PDE4D-226ENST00000546160 ST18O60284 1047 aa7.95□□□□□ -1.14
PDE4D-226ENST00000546160 HSP90B1P14625 803 aaKnown RBP7.95□□□□□ -1.14
PDE4D-226ENST00000546160 DHX57Q6P158 1386 aaKnown RBP7.95□□□□□ -1.14
PDE4D-226ENST00000546160 CTTNBP2Q8WZ74 1663 aa7.95□□□□□ -1.14
PDE4D-226ENST00000546160 NEXNQ0ZGT2 675 aa7.94□□□□□ -1.14
PDE4D-226ENST00000546160 AEBP2Q6ZN18 517 aaPredicted RBP7.94□□□□□ -1.14
PDE4D-226ENST00000546160 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
PDE4D-226ENST00000546160 PSME1Q06323 249 aa7.94□□□□□ -1.14
PDE4D-226ENST00000546160 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.94□□□□□ -1.14
PDE4D-226ENST00000546160 TRAK1Q9UPV9 953 aa7.94□□□□□ -1.14
PDE4D-226ENST00000546160 MEX3CQ5U5Q3 659 aaKnown RBP7.94□□□□□ -1.14
PDE4D-226ENST00000546160 KIF16BQ96L93 1317 aa7.94□□□□□ -1.14
PDE4D-226ENST00000546160 DDX58O95786 925 aaKnown RBP7.93□□□□□ -1.14
PDE4D-226ENST00000546160 CYB5RLQ6IPT4 315 aa7.93□□□□□ -1.14
PDE4D-226ENST00000546160 L3MBTL2Q969R5 705 aa7.93□□□□□ -1.14
PDE4D-226ENST00000546160 CASKIN1Q8WXD9 1431 aa7.93□□□□□ -1.14
PDE4D-226ENST00000546160 ATF3P18847 181 aa7.93□□□□□ -1.14
PDE4D-226ENST00000546160 TTC5Q8N0Z6 440 aa7.93□□□□□ -1.14
PDE4D-226ENST00000546160 TEFQ10587 303 aa7.93□□□□□ -1.14
PDE4D-226ENST00000546160 ITSN2Q9NZM3 1697 aa7.93□□□□□ -1.14
PDE4D-226ENST00000546160 HMGB2P26583 209 aaKnown RBP7.93□□□□□ -1.14
PDE4D-226ENST00000546160 SLC4A10Q6U841 1118 aa7.92□□□□□ -1.14
PDE4D-226ENST00000546160 KIF14Q15058 1648 aa7.92□□□□□ -1.14
PDE4D-226ENST00000546160 E9PSI1 815 aa7.92□□□□□ -1.14
PDE4D-226ENST00000546160 LRRC9Q6ZRR7 1453 aa7.92□□□□□ -1.14
PDE4D-226ENST00000546160 NAP1L5Q96NT1 182 aaPredicted RBP7.92□□□□□ -1.14
PDE4D-226ENST00000546160 USP47Q96K76 1375 aa7.92□□□□□ -1.14
PDE4D-226ENST00000546160 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
PDE4D-226ENST00000546160 APBB1O00213 710 aa7.91□□□□□ -1.14
PDE4D-226ENST00000546160 NOC3LQ8WTT2 800 aaKnown RBP7.91□□□□□ -1.14
PDE4D-226ENST00000546160 RUFY2Q8WXA3 655 aa7.91□□□□□ -1.14
PDE4D-226ENST00000546160 CFAP65Q6ZU64 1925 aaKnown RBP7.91□□□□□ -1.14
PDE4D-226ENST00000546160 SENP3-EIF4A1A0A087X0R7 540 aa7.91□□□□□ -1.14
PDE4D-226ENST00000546160 AKAP17AQ02040 695 aaKnown RBP7.91□□□□□ -1.14
PDE4D-226ENST00000546160 FAM69CQ0P6D2 419 aa7.91□□□□□ -1.14
PDE4D-226ENST00000546160 FGD6Q6ZV73 1430 aa7.9□□□□□ -1.14
PDE4D-226ENST00000546160 ATP6V1DQ9Y5K8 247 aa7.9□□□□□ -1.14
PDE4D-226ENST00000546160 LTV1Q96GA3 475 aaPredicted RBP7.9□□□□□ -1.14
PDE4D-226ENST00000546160 SYNE3Q6ZMZ3 975 aa7.9□□□□□ -1.14
PDE4D-226ENST00000546160 SMG6Q86US8 1419 aaKnown RBP7.9□□□□□ -1.15
PDE4D-226ENST00000546160 RAD54L2Q9Y4B4 1467 aa7.9□□□□□ -1.15
PDE4D-226ENST00000546160 RASSF8Q8NHQ8 419 aa7.9□□□□□ -1.15
PDE4D-226ENST00000546160 TPM2P07951 284 aa7.9□□□□□ -1.15
PDE4D-226ENST00000546160 CPLX2Q6PUV4 134 aaKnown RBP7.89□□□□□ -1.15
PDE4D-226ENST00000546160 IQGAP2Q13576 1575 aa7.89□□□□□ -1.15
PDE4D-226ENST00000546160 MARCH6O60337 910 aa7.89□□□□□ -1.15
PDE4D-226ENST00000546160 CEP89Q96ST8 783 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms