RNA–Protein interactions for RNA: ENST00000545250.5

TSC1-208, Transcript of TSC complex subunit 1, humanhuman

TSL 5 BASIC

Gene TSC1, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-208ENST00000545250 RGL3Q3MIN7 710 aa11.23□□□□□ -0.61
TSC1-208ENST00000545250 ST18O60284 1047 aa11.23□□□□□ -0.61
TSC1-208ENST00000545250 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
TSC1-208ENST00000545250 SMC4Q9NTJ3 1288 aa11.23□□□□□ -0.61
TSC1-208ENST00000545250 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
TSC1-208ENST00000545250 CCAR1Q8IX12 1150 aaKnown RBP11.22□□□□□ -0.61
TSC1-208ENST00000545250 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
TSC1-208ENST00000545250 INCENPQ9NQS7 918 aa11.22□□□□□ -0.61
TSC1-208ENST00000545250 RAD21O60216 631 aa11.22□□□□□ -0.61
TSC1-208ENST00000545250 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
TSC1-208ENST00000545250 NAP1L1P55209 391 aaKnown RBP11.22□□□□□ -0.61
TSC1-208ENST00000545250 HSP90B2PQ58FF3 399 aa11.21□□□□□ -0.61
TSC1-208ENST00000545250 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.61
TSC1-208ENST00000545250 FEZ1Q99689 392 aa11.21□□□□□ -0.61
TSC1-208ENST00000545250 CWC15Q9P013 229 aaKnown RBP11.21□□□□□ -0.61
TSC1-208ENST00000545250 TMEM132AQ24JP5 1023 aa11.21□□□□□ -0.62
TSC1-208ENST00000545250 ARGLU1Q9NWB6 273 aaPredicted RBP11.21□□□□□ -0.62
TSC1-208ENST00000545250 RWDD1Q9H446 243 aaPredicted RBP11.2□□□□□ -0.62
TSC1-208ENST00000545250 DESP17661 470 aa11.2□□□□□ -0.62
TSC1-208ENST00000545250 SEPT7Q16181 437 aaKnown RBP11.2□□□□□ -0.62
TSC1-208ENST00000545250 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
TSC1-208ENST00000545250 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
TSC1-208ENST00000545250 GOLGA6L7A0A1B0GV03 622 aa11.2□□□□□ -0.62
TSC1-208ENST00000545250 SOX12O15370 315 aa11.2□□□□□ -0.62
TSC1-208ENST00000545250 APBB1O00213 710 aa11.2□□□□□ -0.62
TSC1-208ENST00000545250 MSH5O43196 834 aa11.2□□□□□ -0.62
TSC1-208ENST00000545250 TMF1P82094 1093 aa11.19□□□□□ -0.62
TSC1-208ENST00000545250 H0YHG0 523 aa11.19□□□□□ -0.62
TSC1-208ENST00000545250 ERLIN2O94905 339 aa11.19□□□□□ -0.62
TSC1-208ENST00000545250 DHX16O60231 1041 aaKnown RBP11.19□□□□□ -0.62
TSC1-208ENST00000545250 NEFHP12036 1026 aa11.19□□□□□ -0.62
TSC1-208ENST00000545250 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
TSC1-208ENST00000545250 OFD1O75665 1012 aa11.18□□□□□ -0.62
TSC1-208ENST00000545250 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
TSC1-208ENST00000545250 DNAI2Q9GZS0 605 aa11.18□□□□□ -0.62
TSC1-208ENST00000545250 SYCP1Q15431 976 aa11.17□□□□□ -0.62
TSC1-208ENST00000545250 CCDC112Q8NEF3 446 aa11.17□□□□□ -0.62
TSC1-208ENST00000545250 PMFBP1Q8TBY8 1022 aa11.17□□□□□ -0.62
TSC1-208ENST00000545250 PPM1FP49593 454 aaPredicted RBP11.17□□□□□ -0.62
TSC1-208ENST00000545250 ERICH2A1L162 156 aa11.17□□□□□ -0.62
TSC1-208ENST00000545250 VPS37DQ86XT2 251 aa11.17□□□□□ -0.62
TSC1-208ENST00000545250 HMGN5P82970 282 aaKnown RBP11.16□□□□□ -0.62
TSC1-208ENST00000545250 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.62
TSC1-208ENST00000545250 LMOD3Q0VAK6 560 aa11.15□□□□□ -0.62
TSC1-208ENST00000545250 HSP90AA2PQ14568 343 aaPredicted RBP11.15□□□□□ -0.62
TSC1-208ENST00000545250 ITPRIPQ8IWB1 547 aa11.15□□□□□ -0.63
TSC1-208ENST00000545250 GZF1Q9H116 711 aaPredicted RBP11.15□□□□□ -0.63
TSC1-208ENST00000545250 HSP90AB4PQ58FF6 505 aa11.14□□□□□ -0.63
TSC1-208ENST00000545250 BRMS1Q9HCU9 246 aa11.14□□□□□ -0.63
TSC1-208ENST00000545250 PPM1EQ8WY54 764 aa11.14□□□□□ -0.63
TSC1-208ENST00000545250 MEX3CQ5U5Q3 659 aaKnown RBP11.14□□□□□ -0.63
TSC1-208ENST00000545250 GBP2P32456 591 aaPredicted RBP11.14□□□□□ -0.63
TSC1-208ENST00000545250 CHMP5Q9NZZ3 219 aa11.14□□□□□ -0.63
TSC1-208ENST00000545250 DYDC1Q8WWB3 177 aa11.13□□□□□ -0.63
TSC1-208ENST00000545250 PLCD4Q9BRC7 762 aa11.13□□□□□ -0.63
TSC1-208ENST00000545250 KIF3BO15066 747 aa11.13□□□□□ -0.63
TSC1-208ENST00000545250 NEBLO76041 1014 aa11.13□□□□□ -0.63
TSC1-208ENST00000545250 TRDNQ13061 729 aa11.13□□□□□ -0.63
TSC1-208ENST00000545250 CC2D1BQ5T0F9 858 aaKnown RBP11.13□□□□□ -0.63
TSC1-208ENST00000545250 ANKRD62A6NC57 917 aa11.13□□□□□ -0.63
TSC1-208ENST00000545250 STAMBPO95630 424 aa11.12□□□□□ -0.63
TSC1-208ENST00000545250 SAFBQ15424 915 aaKnown RBP eCLIP11.12□□□□□ -0.63
TSC1-208ENST00000545250 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
TSC1-208ENST00000545250 AEBP2Q6ZN18 517 aaPredicted RBP11.12□□□□□ -0.63
TSC1-208ENST00000545250 GOLGA6L10A6NI86 522 aa11.11□□□□□ -0.63
TSC1-208ENST00000545250 RABEP1Q15276 862 aa11.11□□□□□ -0.63
TSC1-208ENST00000545250 CLASRPQ8N2M8 674 aaKnown RBP11.11□□□□□ -0.63
TSC1-208ENST00000545250 TXLNBQ8N3L3 684 aa11.11□□□□□ -0.63
TSC1-208ENST00000545250 EIF3AQ14152 1382 aaKnown RBP11.11□□□□□ -0.63
TSC1-208ENST00000545250 MCTP1Q6DN14 999 aa11.11□□□□□ -0.63
TSC1-208ENST00000545250 SKOR2Q2VWA4 1001 aaPredicted RBP11.11□□□□□ -0.63
TSC1-208ENST00000545250 ZNF592Q92610 1267 aa11.11□□□□□ -0.63
TSC1-208ENST00000545250 ENOX2Q16206 610 aaKnown RBP11.1□□□□□ -0.63
TSC1-208ENST00000545250 CPLX1O14810 134 aa11.1□□□□□ -0.63
TSC1-208ENST00000545250 RUFY2Q8WXA3 655 aa11.1□□□□□ -0.63
TSC1-208ENST00000545250 RRP7BPQ9NSQ0 103 aa11.1□□□□□ -0.63
TSC1-208ENST00000545250 XBP1P17861 261 aa11.1□□□□□ -0.63
TSC1-208ENST00000545250 MNS1Q8NEH6 495 aa11.09□□□□□ -0.63
TSC1-208ENST00000545250 LUC7LQ9NQ29 371 aaKnown RBP11.09□□□□□ -0.63
TSC1-208ENST00000545250 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
TSC1-208ENST00000545250 EVA1CP58658 441 aa11.09□□□□□ -0.63
TSC1-208ENST00000545250 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
TSC1-208ENST00000545250 DDX23Q9BUQ8 820 aaKnown RBP11.08□□□□□ -0.64
TSC1-208ENST00000545250 ABCC9O60706 1549 aa11.08□□□□□ -0.64
TSC1-208ENST00000545250 CFAP57Q96MR6 1250 aa11.08□□□□□ -0.64
TSC1-208ENST00000545250 PHF23Q9BUL5 403 aaPredicted RBP11.08□□□□□ -0.64
TSC1-208ENST00000545250 NAT10Q9H0A0 1025 aaKnown RBP11.08□□□□□ -0.64
TSC1-208ENST00000545250 CFDP1Q9UEE9 299 aaPredicted RBP11.08□□□□□ -0.64
TSC1-208ENST00000545250 CENPJQ9HC77 1338 aaPredicted RBP11.08□□□□□ -0.64
TSC1-208ENST00000545250 SPATA24Q86W54 205 aa11.08□□□□□ -0.64
TSC1-208ENST00000545250 CCDC91Q7Z6B0 441 aa11.07□□□□□ -0.64
TSC1-208ENST00000545250 DEKP35659 375 aaKnown RBP11.07□□□□□ -0.64
TSC1-208ENST00000545250 OLFM4Q6UX06 510 aa11.07□□□□□ -0.64
TSC1-208ENST00000545250 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
TSC1-208ENST00000545250 NF2P35240 595 aa11.07□□□□□ -0.64
TSC1-208ENST00000545250 NFXL1Q6ZNB6 911 aa11.07□□□□□ -0.64
TSC1-208ENST00000545250 EID1Q9Y6B2 187 aa11.07□□□□□ -0.64
TSC1-208ENST00000545250 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
TSC1-208ENST00000545250 SMARCE1Q969G3 411 aa11.06□□□□□ -0.64
TSC1-208ENST00000545250 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms