RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
LDHA-222ENST00000543695 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
LDHA-222ENST00000543695 CHIC2Q9UKJ5 165 aa16.1■□□□□ 0.17
LDHA-222ENST00000543695 ZNF644Q9H582 1327 aaPredicted RBP16.1■□□□□ 0.17
LDHA-222ENST00000543695 AGLP35573 1532 aa16.09■□□□□ 0.17
LDHA-222ENST00000543695 SHANK2Q9UPX8 1470 aa16.09■□□□□ 0.17
LDHA-222ENST00000543695 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
LDHA-222ENST00000543695 SAMD9LQ8IVG5 1584 aa16.09■□□□□ 0.17
LDHA-222ENST00000543695 FER1L4A9Z1Z3 1794 aa16.08■□□□□ 0.17
LDHA-222ENST00000543695 ARHGEF5Q12774 1597 aa16.08■□□□□ 0.16
LDHA-222ENST00000543695 ABCA6Q8N139 1617 aa16.08■□□□□ 0.16
LDHA-222ENST00000543695 RSPH4AQ5TD94 716 aa16.07■□□□□ 0.16
LDHA-222ENST00000543695 KIDINS220Q9ULH0 1771 aa16.05■□□□□ 0.16
LDHA-222ENST00000543695 CNTLNQ9NXG0 1405 aa16.05■□□□□ 0.16
LDHA-222ENST00000543695 GGT6Q6P531 493 aa16.04■□□□□ 0.16
LDHA-222ENST00000543695 FBXO41Q8TF61 875 aa16.04■□□□□ 0.16
LDHA-222ENST00000543695 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
LDHA-222ENST00000543695 UHRF1BP1Q6BDS2 1440 aa16.03■□□□□ 0.16
LDHA-222ENST00000543695 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
LDHA-222ENST00000543695 NCOA1Q15788 1441 aa16.02■□□□□ 0.16
LDHA-222ENST00000543695 MPHOSPH9Q99550 1183 aa16.02■□□□□ 0.16
LDHA-222ENST00000543695 PPP6R1Q9UPN7 881 aa16.02■□□□□ 0.16
LDHA-222ENST00000543695 ATP7AQ04656 1500 aa16.02■□□□□ 0.15
LDHA-222ENST00000543695 A2MP01023 1474 aa16.02■□□□□ 0.15
LDHA-222ENST00000543695 MBD5Q9P267 1494 aa16.02■□□□□ 0.15
LDHA-222ENST00000543695 TSPY4P0CV99 314 aa16.01■□□□□ 0.15
LDHA-222ENST00000543695 TSPY10P0CW01 314 aa16.01■□□□□ 0.15
LDHA-222ENST00000543695 RTEL1-TNFRSF6BF6WH68 1400 aa16.01■□□□□ 0.15
LDHA-222ENST00000543695 ZMYM3Q14202 1370 aa16■□□□□ 0.15
LDHA-222ENST00000543695 SETD1BQ9UPS6 1966 aaKnown RBP16■□□□□ 0.15
LDHA-222ENST00000543695 ANKRD30AQ9BXX3 1397 aa16■□□□□ 0.15
LDHA-222ENST00000543695 PZPP20742 1482 aa15.99■□□□□ 0.15
LDHA-222ENST00000543695 RPRD2Q5VT52 1461 aaKnown RBP15.99■□□□□ 0.15
LDHA-222ENST00000543695 KDM5DQ9BY66 1539 aa15.99■□□□□ 0.15
LDHA-222ENST00000543695 MAST1Q9Y2H9 1570 aa15.98■□□□□ 0.15
LDHA-222ENST00000543695 ANKRD30BQ9BXX2 1392 aa15.98■□□□□ 0.15
LDHA-222ENST00000543695 POLR1AO95602 1720 aaPredicted RBP15.97■□□□□ 0.15
LDHA-222ENST00000543695 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
LDHA-222ENST00000543695 INO80Q9ULG1 1556 aaPredicted RBP15.96■□□□□ 0.14
LDHA-222ENST00000543695 PREX1Q8TCU6 1659 aa15.95■□□□□ 0.14
LDHA-222ENST00000543695 KIF3BO15066 747 aa15.95■□□□□ 0.14
LDHA-222ENST00000543695 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
LDHA-222ENST00000543695 NPATQ14207 1427 aa15.94■□□□□ 0.14
LDHA-222ENST00000543695 CERKQ8TCT0 537 aa15.94■□□□□ 0.14
LDHA-222ENST00000543695 CCDC141Q6ZP82 1450 aa15.94■□□□□ 0.14
LDHA-222ENST00000543695 C3P01024 1663 aa15.92■□□□□ 0.14
LDHA-222ENST00000543695 PLXNC1O60486 1568 aa15.92■□□□□ 0.14
LDHA-222ENST00000543695 MSH5O43196 834 aa15.92■□□□□ 0.14
LDHA-222ENST00000543695 ANKRD50Q9ULJ7 1429 aa15.92■□□□□ 0.14
LDHA-222ENST00000543695 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
LDHA-222ENST00000543695 WASHC2CQ9Y4E1 1318 aa15.9■□□□□ 0.14
LDHA-222ENST00000543695 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
LDHA-222ENST00000543695 UNC13BO14795 1591 aa15.87■□□□□ 0.13
LDHA-222ENST00000543695 PTPRTO14522 1441 aa15.87■□□□□ 0.13
LDHA-222ENST00000543695 DDX10Q13206 875 aaKnown RBP15.87■□□□□ 0.13
LDHA-222ENST00000543695 MROH2AA6NES4 1674 aa15.86■□□□□ 0.13
LDHA-222ENST00000543695 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
LDHA-222ENST00000543695 PKD2Q13563 968 aa15.84■□□□□ 0.13
LDHA-222ENST00000543695 FBXO31Q5XUX0 539 aaPredicted RBP15.84■□□□□ 0.13
LDHA-222ENST00000543695 NCKAP5LQ9HCH0 1330 aa15.84■□□□□ 0.13
LDHA-222ENST00000543695 KIF15Q9NS87 1388 aa15.84■□□□□ 0.13
LDHA-222ENST00000543695 CLTCQ00610 1675 aaKnown RBP15.83■□□□□ 0.13
LDHA-222ENST00000543695 STRCQ7RTU9 1775 aa15.82■□□□□ 0.12
LDHA-222ENST00000543695 CCER2I3L3R5 266 aa15.82■□□□□ 0.12
LDHA-222ENST00000543695 IQGAP3Q86VI3 1631 aa15.8■□□□□ 0.12
LDHA-222ENST00000543695 TNRQ92752 1358 aa15.8■□□□□ 0.12
LDHA-222ENST00000543695 EIF4G2P78344 907 aaKnown RBP eCLIP15.8■□□□□ 0.12
LDHA-222ENST00000543695 CAMSAP1Q5T5Y3 1602 aa15.79■□□□□ 0.12
LDHA-222ENST00000543695 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
LDHA-222ENST00000543695 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
LDHA-222ENST00000543695 NUP155O75694 1391 aa15.78■□□□□ 0.12
LDHA-222ENST00000543695 ANP32CO43423 234 aa15.78■□□□□ 0.12
LDHA-222ENST00000543695 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
LDHA-222ENST00000543695 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
LDHA-222ENST00000543695 THEMISQ8N1K5 641 aaPredicted RBP15.77■□□□□ 0.12
LDHA-222ENST00000543695 PLA2R1Q13018 1463 aa15.77■□□□□ 0.11
LDHA-222ENST00000543695 A2ML1A8K2U0 1454 aa15.76■□□□□ 0.11
LDHA-222ENST00000543695 CEP170BQ9Y4F5 1589 aaPredicted RBP15.75■□□□□ 0.11
LDHA-222ENST00000543695 NBPF8Q3BBV2 869 aa15.75■□□□□ 0.11
LDHA-222ENST00000543695 SPATA31E1Q6ZUB1 1445 aa15.75■□□□□ 0.11
LDHA-222ENST00000543695 ANKLE2Q86XL3 938 aa15.74■□□□□ 0.11
LDHA-222ENST00000543695 MYO3AQ8NEV4 1616 aa15.72■□□□□ 0.11
LDHA-222ENST00000543695 RALGAPBQ86X10 1494 aa15.72■□□□□ 0.11
LDHA-222ENST00000543695 ERBINQ96RT1 1412 aa15.72■□□□□ 0.11
LDHA-222ENST00000543695 WASHC2AQ641Q2 1341 aa15.71■□□□□ 0.11
LDHA-222ENST00000543695 ZNF335Q9H4Z2 1342 aaPredicted RBP15.71■□□□□ 0.11
LDHA-222ENST00000543695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.71■□□□□ 0.11
LDHA-222ENST00000543695 CCDC7Q96M83 1385 aa15.71■□□□□ 0.11
LDHA-222ENST00000543695 NLRP1Q9C000 1473 aa15.7■□□□□ 0.1
LDHA-222ENST00000543695 ZNF142P52746 1687 aaPredicted RBP15.7■□□□□ 0.1
LDHA-222ENST00000543695 LTBP4Q8N2S1 1624 aa15.69■□□□□ 0.1
LDHA-222ENST00000543695 ABCC3O15438 1527 aa15.68■□□□□ 0.1
LDHA-222ENST00000543695 KANK1Q14678 1352 aa15.67■□□□□ 0.1
LDHA-222ENST00000543695 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
LDHA-222ENST00000543695 LAMC1P11047 1609 aa15.67■□□□□ 0.1
LDHA-222ENST00000543695 TRPM1Q7Z4N2 1603 aa15.67■□□□□ 0.1
LDHA-222ENST00000543695 RNF17Q9BXT8 1623 aaKnown RBP15.67■□□□□ 0.1
LDHA-222ENST00000543695 IQSEC2Q5JU85 1478 aa15.66■□□□□ 0.1
LDHA-222ENST00000543695 EIF2AK4Q9P2K8 1649 aaKnown RBP15.66■□□□□ 0.1
LDHA-222ENST00000543695 UGGT1Q9NYU2 1555 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 167.6 ms