RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 RNF166Q96A37 237 aaPredicted RBP8.92□□□□□ -0.98
LDHB-209ENST00000542765 ZBED2Q9BTP6 218 aa8.92□□□□□ -0.98
LDHB-209ENST00000542765 BHMG1C9JSJ3 638 aaPredicted RBP8.9□□□□□ -0.98
LDHB-209ENST00000542765 COL9A1P20849 921 aa8.89□□□□□ -0.99
LDHB-209ENST00000542765 DDX12PQ92771 950 aa8.89□□□□□ -0.99
LDHB-209ENST00000542765 PPP1R3GB7ZBB8 358 aa8.88□□□□□ -0.99
LDHB-209ENST00000542765 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
LDHB-209ENST00000542765 C6orf132Q5T0Z8 1188 aa8.88□□□□□ -0.99
LDHB-209ENST00000542765 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
LDHB-209ENST00000542765 KCNH8Q96L42 1107 aa8.88□□□□□ -0.99
LDHB-209ENST00000542765 ARHGEF1Q92888 912 aaKnown RBP8.87□□□□□ -0.99
LDHB-209ENST00000542765 EN1Q05925 392 aaPredicted RBP8.86□□□□□ -0.99
LDHB-209ENST00000542765 OSBPP22059 807 aa8.84□□□□□ -0.99
LDHB-209ENST00000542765 NBR1Q14596 966 aa8.83□□□□□ -1
LDHB-209ENST00000542765 ONECUT3O60422 494 aaPredicted RBP8.82□□□□□ -1
LDHB-209ENST00000542765 VSIG10Q8N0Z9 540 aa8.82□□□□□ -1
LDHB-209ENST00000542765 KDM2AQ9Y2K7 1162 aa8.82□□□□□ -1
LDHB-209ENST00000542765 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
LDHB-209ENST00000542765 PROX2Q3B8N5 592 aa8.81□□□□□ -1
LDHB-209ENST00000542765 RBM33Q96EV2 1170 aaKnown RBP8.81□□□□□ -1
LDHB-209ENST00000542765 RABGEF1Q9UJ41 708 aa8.81□□□□□ -1
LDHB-209ENST00000542765 GRXCR2A6NFK2 248 aa8.79□□□□□ -1
LDHB-209ENST00000542765 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
LDHB-209ENST00000542765 MAP3K7O43318 606 aa8.77□□□□□ -1.01
LDHB-209ENST00000542765 MLLT3P42568 568 aaPredicted RBP8.77□□□□□ -1.01
LDHB-209ENST00000542765 P3H3Q8IVL6 736 aa8.77□□□□□ -1.01
LDHB-209ENST00000542765 NBPF3Q9H094 633 aa8.75□□□□□ -1.01
LDHB-209ENST00000542765 NPDC1Q9NQX5 325 aaPredicted RBP8.75□□□□□ -1.01
LDHB-209ENST00000542765 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
LDHB-209ENST00000542765 HCSTQ9UBK5 93 aa8.75□□□□□ -1.01
LDHB-209ENST00000542765 LAPTM4BQ86VI4 370 aa8.74□□□□□ -1.01
LDHB-209ENST00000542765 MRPL50Q8N5N7 158 aaKnown RBP8.74□□□□□ -1.01
LDHB-209ENST00000542765 CERKQ8TCT0 537 aa8.74□□□□□ -1.01
LDHB-209ENST00000542765 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
LDHB-209ENST00000542765 TSKSQ9UJT2 592 aa8.74□□□□□ -1.01
LDHB-209ENST00000542765 KCTD12Q96CX2 325 aaKnown RBP8.73□□□□□ -1.01
LDHB-209ENST00000542765 STAC3Q96MF2 364 aa8.73□□□□□ -1.01
LDHB-209ENST00000542765 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
LDHB-209ENST00000542765 PRSS12P56730 875 aa8.72□□□□□ -1.01
LDHB-209ENST00000542765 TTC13Q8NBP0 860 aa8.72□□□□□ -1.01
LDHB-209ENST00000542765 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
LDHB-209ENST00000542765 SEMA3EO15041 775 aa8.71□□□□□ -1.02
LDHB-209ENST00000542765 THSD4Q6ZMP0 1018 aa8.71□□□□□ -1.02
LDHB-209ENST00000542765 RBM27Q9P2N5 1060 aaKnown RBP8.7□□□□□ -1.02
LDHB-209ENST00000542765 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
LDHB-209ENST00000542765 WNT2BQ93097 391 aa8.69□□□□□ -1.02
LDHB-209ENST00000542765 TESPA1A2RU30 521 aaPredicted RBP8.68□□□□□ -1.02
LDHB-209ENST00000542765 ZFRQ96KR1 1074 aaKnown RBP8.68□□□□□ -1.02
LDHB-209ENST00000542765 FAM98CQ17RN3 349 aaKnown RBP8.67□□□□□ -1.02
LDHB-209ENST00000542765 PACS2Q86VP3 889 aa8.67□□□□□ -1.02
LDHB-209ENST00000542765 SEPT9Q9UHD8 586 aaPredicted RBP8.67□□□□□ -1.02
LDHB-209ENST00000542765 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
LDHB-209ENST00000542765 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.02
LDHB-209ENST00000542765 PTGDRQ13258 359 aa8.65□□□□□ -1.02
LDHB-209ENST00000542765 ANKK1Q8NFD2 765 aa8.64□□□□□ -1.03
LDHB-209ENST00000542765 TATDN2Q93075 761 aa8.64□□□□□ -1.03
LDHB-209ENST00000542765 PTPN5P54829 565 aa8.63□□□□□ -1.03
LDHB-209ENST00000542765 BCAMP50895 628 aa8.62□□□□□ -1.03
LDHB-209ENST00000542765 PADI6Q6TGC4 694 aa8.62□□□□□ -1.03
LDHB-209ENST00000542765 SMAPO00193 183 aa8.61□□□□□ -1.03
LDHB-209ENST00000542765 EYA1Q99502 592 aa8.6□□□□□ -1.03
LDHB-209ENST00000542765 PLA2G2EQ9NZK7 142 aa8.6□□□□□ -1.03
LDHB-209ENST00000542765 NBPF26B4DH59 902 aa8.59□□□□□ -1.03
LDHB-209ENST00000542765 IFFO2Q5TF58 517 aa8.59□□□□□ -1.03
LDHB-209ENST00000542765 NUDT18Q6ZVK8 323 aa8.59□□□□□ -1.03
LDHB-209ENST00000542765 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
LDHB-209ENST00000542765 GPR37O15354 613 aa8.58□□□□□ -1.04
LDHB-209ENST00000542765 RBM26Q5T8P6 1007 aaKnown RBP8.57□□□□□ -1.04
LDHB-209ENST00000542765 WBP1LQ9NX94 342 aa8.57□□□□□ -1.04
LDHB-209ENST00000542765 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.57□□□□□ -1.04
LDHB-209ENST00000542765 NYAP1Q6ZVC0 841 aa8.56□□□□□ -1.04
LDHB-209ENST00000542765 SAMD7Q7Z3H4 446 aa8.56□□□□□ -1.04
LDHB-209ENST00000542765 LRCH3Q96II8 777 aa8.56□□□□□ -1.04
LDHB-209ENST00000542765 TSR3Q9UJK0 312 aaKnown RBP8.56□□□□□ -1.04
LDHB-209ENST00000542765 NUTM2FA1L443 756 aa8.55□□□□□ -1.04
LDHB-209ENST00000542765 FCHSD2O94868 740 aa8.55□□□□□ -1.04
LDHB-209ENST00000542765 SMYD5Q6GMV2 418 aa8.55□□□□□ -1.04
LDHB-209ENST00000542765 ADGRG1Q9Y653 693 aa8.55□□□□□ -1.04
LDHB-209ENST00000542765 ITGBL1O95965 494 aaPredicted RBP8.54□□□□□ -1.04
LDHB-209ENST00000542765 HPS5Q9UPZ3 1129 aa8.53□□□□□ -1.04
LDHB-209ENST00000542765 HIC1Q14526 733 aa8.52□□□□□ -1.05
LDHB-209ENST00000542765 FECHP22830 423 aa8.49□□□□□ -1.05
LDHB-209ENST00000542765 SWT1Q5T5J6 900 aaKnown RBP8.49□□□□□ -1.05
LDHB-209ENST00000542765 PPP4CP60510 307 aa8.48□□□□□ -1.05
LDHB-209ENST00000542765 FAM161AQ3B820 660 aa8.48□□□□□ -1.05
LDHB-209ENST00000542765 GNPATO15228 680 aa8.47□□□□□ -1.05
LDHB-209ENST00000542765 RBM46Q8TBY0 533 aaKnown RBP8.47□□□□□ -1.05
LDHB-209ENST00000542765 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
LDHB-209ENST00000542765 TMEM134Q9H6X4 195 aa8.47□□□□□ -1.05
LDHB-209ENST00000542765 RCCD1A6NED2 376 aa8.46□□□□□ -1.06
LDHB-209ENST00000542765 DNAJB2P25686 324 aa8.46□□□□□ -1.06
LDHB-209ENST00000542765 OATP04181 439 aa8.45□□□□□ -1.06
LDHB-209ENST00000542765 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
LDHB-209ENST00000542765 TJAP1Q5JTD0 557 aa8.45□□□□□ -1.06
LDHB-209ENST00000542765 BCANQ96GW7 911 aa8.45□□□□□ -1.06
LDHB-209ENST00000542765 A0A0G2JS52 829 aa8.44□□□□□ -1.06
LDHB-209ENST00000542765 APLP1P51693 650 aa8.44□□□□□ -1.06
LDHB-209ENST00000542765 METTL3Q86U44 580 aaKnown RBP8.44□□□□□ -1.06
LDHB-209ENST00000542765 SLF2Q8IX21 1173 aa8.44□□□□□ -1.06
LDHB-209ENST00000542765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms