RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 TARBP1Q13395 1621 aaKnown RBP4.59□□□□□ -1.67
TRAV1-1-201ENST00000542354 CEP170Q5SW79 1584 aa4.59□□□□□ -1.67
TRAV1-1-201ENST00000542354 TEX14Q8IWB6 1497 aa4.59□□□□□ -1.67
TRAV1-1-201ENST00000542354 ZFP91Q96JP5 570 aaPredicted RBP4.59□□□□□ -1.67
TRAV1-1-201ENST00000542354 KCNH8Q96L42 1107 aa4.59□□□□□ -1.67
TRAV1-1-201ENST00000542354 PIP4K2BP78356 416 aa4.58□□□□□ -1.68
TRAV1-1-201ENST00000542354 ADAMTSL3P82987 1691 aa4.57□□□□□ -1.68
TRAV1-1-201ENST00000542354 ARID4BQ4LE39 1312 aaPredicted RBP4.57□□□□□ -1.68
TRAV1-1-201ENST00000542354 TOM1O60784 492 aa4.57□□□□□ -1.68
TRAV1-1-201ENST00000542354 POTEAQ6S8J7 498 aa4.57□□□□□ -1.68
TRAV1-1-201ENST00000542354 TMC2Q8TDI7 906 aa4.57□□□□□ -1.68
TRAV1-1-201ENST00000542354 GRIN2BQ13224 1484 aa4.56□□□□□ -1.68
TRAV1-1-201ENST00000542354 STK24Q9Y6E0 443 aa4.56□□□□□ -1.68
TRAV1-1-201ENST00000542354 PPRC1Q5VV67 1664 aaKnown RBP4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 POTEB3A0JP26 581 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 ZNF316A6NFI3 1004 aaPredicted RBP4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 STK25O00506 426 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 GPR153Q6NV75 609 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 POTEBQ6S5H4 581 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 STAC3Q96MF2 364 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 BCL11BQ9C0K0 894 aaPredicted RBP4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 PHF8Q9UPP1 1060 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 GLI2P10070 1586 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 SOGA1O94964 1423 aa4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 PRG4Q92954 1404 aaPredicted RBP4.55□□□□□ -1.68
TRAV1-1-201ENST00000542354 KIF21BO75037 1637 aa4.54□□□□□ -1.68
TRAV1-1-201ENST00000542354 SENP3-EIF4A1A0A087X0R7 540 aa4.54□□□□□ -1.68
TRAV1-1-201ENST00000542354 ANKRD13DQ6ZTN6 518 aa4.54□□□□□ -1.68
TRAV1-1-201ENST00000542354 JPH4Q96JJ6 628 aa4.54□□□□□ -1.68
TRAV1-1-201ENST00000542354 TBC1D12O60347 775 aa4.53□□□□□ -1.68
TRAV1-1-201ENST00000542354 LSM11P83369 360 aaKnown RBP eCLIP4.53□□□□□ -1.68
TRAV1-1-201ENST00000542354 ARSIQ5FYB1 569 aa4.53□□□□□ -1.68
TRAV1-1-201ENST00000542354 RYDENQ9NUL5 291 aaKnown RBP4.53□□□□□ -1.68
TRAV1-1-201ENST00000542354 HCSTQ9UBK5 93 aa4.53□□□□□ -1.68
TRAV1-1-201ENST00000542354 PLB1Q6P1J6 1458 aa4.53□□□□□ -1.68
TRAV1-1-201ENST00000542354 RAD54L2Q9Y4B4 1467 aa4.52□□□□□ -1.69
TRAV1-1-201ENST00000542354 ECM2O94769 699 aaPredicted RBP4.52□□□□□ -1.69
TRAV1-1-201ENST00000542354 YY1P25490 414 aa4.52□□□□□ -1.69
TRAV1-1-201ENST00000542354 WDR97A6NE52 1622 aa4.52□□□□□ -1.69
TRAV1-1-201ENST00000542354 POLA1P09884 1462 aaPredicted RBP4.51□□□□□ -1.69
TRAV1-1-201ENST00000542354 ADCY10Q96PN6 1610 aa4.51□□□□□ -1.69
TRAV1-1-201ENST00000542354 MS4A4AQ96JQ5 239 aa4.51□□□□□ -1.69
TRAV1-1-201ENST00000542354 DNMBPQ6XZF7 1577 aa4.51□□□□□ -1.69
TRAV1-1-201ENST00000542354 STRCQ7RTU9 1775 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 SHROOM2Q13796 1616 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 MADDQ8WXG6 1647 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 ASXL2Q76L83 1435 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 TMEM92Q6UXU6 159 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 FBXO22Q8NEZ5 403 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 RNF25Q96BH1 459 aaPredicted RBP4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 CFAP43Q8NDM7 1665 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 KIAA0586Q9BVV6 1533 aa4.5□□□□□ -1.69
TRAV1-1-201ENST00000542354 NUP160Q12769 1436 aa4.49□□□□□ -1.69
TRAV1-1-201ENST00000542354 PCDHGA4Q9Y5G9 962 aa4.49□□□□□ -1.69
TRAV1-1-201ENST00000542354 C2orf72A6NCS6 295 aa4.48□□□□□ -1.69
TRAV1-1-201ENST00000542354 TK2O00142 265 aa4.48□□□□□ -1.69
TRAV1-1-201ENST00000542354 ARHGAP33O14559 1287 aa4.48□□□□□ -1.69
TRAV1-1-201ENST00000542354 PPP4R3BQ5MIZ7 849 aa4.48□□□□□ -1.69
TRAV1-1-201ENST00000542354 BCORL1Q5H9F3 1711 aa4.48□□□□□ -1.69
TRAV1-1-201ENST00000542354 GRIN2AQ12879 1464 aa4.48□□□□□ -1.69
TRAV1-1-201ENST00000542354 ZNF335Q9H4Z2 1342 aaPredicted RBP4.47□□□□□ -1.69
TRAV1-1-201ENST00000542354 KIF3CO14782 793 aa4.47□□□□□ -1.69
TRAV1-1-201ENST00000542354 NUDT7P0C024 238 aa4.47□□□□□ -1.69
TRAV1-1-201ENST00000542354 MFRPQ9BY79 579 aa4.47□□□□□ -1.69
TRAV1-1-201ENST00000542354 RIMS1Q86UR5 1692 aaKnown RBP4.47□□□□□ -1.69
TRAV1-1-201ENST00000542354 PLA2G2EQ9NZK7 142 aa4.46□□□□□ -1.7
TRAV1-1-201ENST00000542354 SETD1AO15047 1707 aaKnown RBP4.46□□□□□ -1.7
TRAV1-1-201ENST00000542354 MAP3K4Q9Y6R4 1608 aa4.46□□□□□ -1.7
TRAV1-1-201ENST00000542354 ADGRD1Q6QNK2 874 aa4.45□□□□□ -1.7
TRAV1-1-201ENST00000542354 TRIM52Q96A61 297 aa4.45□□□□□ -1.7
TRAV1-1-201ENST00000542354 LHX6Q9UPM6 363 aa4.45□□□□□ -1.7
TRAV1-1-201ENST00000542354 EPRSP07814 1512 aaKnown RBP4.45□□□□□ -1.7
TRAV1-1-201ENST00000542354 UHRF1BP1Q6BDS2 1440 aa4.45□□□□□ -1.7
TRAV1-1-201ENST00000542354 POGZQ7Z3K3 1410 aa4.45□□□□□ -1.7
TRAV1-1-201ENST00000542354 RGS20O76081 388 aa4.44□□□□□ -1.7
TRAV1-1-201ENST00000542354 PTCD2Q8WV60 388 aaKnown RBP4.44□□□□□ -1.7
TRAV1-1-201ENST00000542354 ABCC2Q92887 1545 aa4.43□□□□□ -1.7
TRAV1-1-201ENST00000542354 PREX1Q8TCU6 1659 aa4.43□□□□□ -1.7
TRAV1-1-201ENST00000542354 FOXK1P85037 733 aa4.43□□□□□ -1.7
TRAV1-1-201ENST00000542354 GOLGA8CPA6NN73 597 aa4.42□□□□□ -1.7
TRAV1-1-201ENST00000542354 RAPGEF3O95398 923 aa4.42□□□□□ -1.7
TRAV1-1-201ENST00000542354 C1QTNF8P60827 252 aa4.42□□□□□ -1.7
TRAV1-1-201ENST00000542354 PRDM2Q13029 1718 aa4.42□□□□□ -1.7
TRAV1-1-201ENST00000542354 PTPRKQ15262 1439 aa4.42□□□□□ -1.7
TRAV1-1-201ENST00000542354 CD109Q6YHK3 1445 aa4.42□□□□□ -1.7
TRAV1-1-201ENST00000542354 SETD1BQ9UPS6 1966 aaKnown RBP4.42□□□□□ -1.7
TRAV1-1-201ENST00000542354 MAGI3Q5TCQ9 1506 aa4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 SETBP1Q9Y6X0 1596 aa4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 PTPRGP23470 1445 aa4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 CEBPAP49715 358 aaPredicted RBP4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 KHSRPQ92945 711 aaKnown RBP eCLIP4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 GPHNQ9NQX3 736 aaPredicted RBP4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 TTBK1Q5TCY1 1321 aaPredicted RBP4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 ARAP3Q8WWN8 1544 aa4.41□□□□□ -1.7
TRAV1-1-201ENST00000542354 RXRBP28702 533 aa4.4□□□□□ -1.71
TRAV1-1-201ENST00000542354 MLECQ14165 292 aa4.4□□□□□ -1.71
TRAV1-1-201ENST00000542354 ZNF772Q68DY9 489 aaPredicted RBP4.4□□□□□ -1.71
TRAV1-1-201ENST00000542354 PLPP6Q8IY26 295 aa4.4□□□□□ -1.71
TRAV1-1-201ENST00000542354 HS6ST3Q8IZP7 471 aa4.4□□□□□ -1.71
TRAV1-1-201ENST00000542354 NBPF3Q9H094 633 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms