RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
TRPM1-203ENST00000542188 HSP90B2PQ58FF3 399 aa17.36■□□□□ 0.37
TRPM1-203ENST00000542188 SIN3AQ96ST3 1273 aa17.36■□□□□ 0.37
TRPM1-203ENST00000542188 PCMTD1Q96MG8 357 aaPredicted RBP17.35■□□□□ 0.37
TRPM1-203ENST00000542188 CEP162Q5TB80 1403 aa17.35■□□□□ 0.37
TRPM1-203ENST00000542188 CCDC66A2RUB6 948 aa17.35■□□□□ 0.37
TRPM1-203ENST00000542188 SMC4Q9NTJ3 1288 aa17.34■□□□□ 0.37
TRPM1-203ENST00000542188 FOXD4L5Q5VV16 416 aaPredicted RBP17.34■□□□□ 0.37
TRPM1-203ENST00000542188 FOXD4L4Q8WXT5 416 aaPredicted RBP17.34■□□□□ 0.37
TRPM1-203ENST00000542188 HOOK1Q9UJC3 728 aaKnown RBP17.34■□□□□ 0.37
TRPM1-203ENST00000542188 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
TRPM1-203ENST00000542188 AKAP17AQ02040 695 aaKnown RBP17.33■□□□□ 0.37
TRPM1-203ENST00000542188 TOMM22Q9NS69 142 aa17.33■□□□□ 0.36
TRPM1-203ENST00000542188 MNS1Q8NEH6 495 aa17.33■□□□□ 0.36
TRPM1-203ENST00000542188 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
TRPM1-203ENST00000542188 FBXO3Q9UK99 471 aa17.32■□□□□ 0.36
TRPM1-203ENST00000542188 ERCC4Q92889 916 aaPredicted RBP17.32■□□□□ 0.36
TRPM1-203ENST00000542188 H0YHG0 523 aa17.31■□□□□ 0.36
TRPM1-203ENST00000542188 U2AF1L5P0DN76 240 aaPredicted RBP17.31■□□□□ 0.36
TRPM1-203ENST00000542188 U2AF1Q01081 240 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRPM1-203ENST00000542188 SOX12O15370 315 aa17.3■□□□□ 0.36
TRPM1-203ENST00000542188 FAM43AQ8N2R8 423 aa17.3■□□□□ 0.36
TRPM1-203ENST00000542188 PDE3BQ13370 1112 aa17.29■□□□□ 0.36
TRPM1-203ENST00000542188 DIAPH3Q9NSV4 1193 aa17.29■□□□□ 0.36
TRPM1-203ENST00000542188 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRPM1-203ENST00000542188 SYNE3Q6ZMZ3 975 aa17.28■□□□□ 0.36
TRPM1-203ENST00000542188 G3V3G9 751 aa17.28■□□□□ 0.36
TRPM1-203ENST00000542188 FAM161AQ3B820 660 aa17.28■□□□□ 0.36
TRPM1-203ENST00000542188 DCAF8Q5TAQ9 597 aa17.28■□□□□ 0.36
TRPM1-203ENST00000542188 CENPJQ9HC77 1338 aaPredicted RBP17.28■□□□□ 0.36
TRPM1-203ENST00000542188 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
TRPM1-203ENST00000542188 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
TRPM1-203ENST00000542188 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.36
TRPM1-203ENST00000542188 LMOD3Q0VAK6 560 aa17.27■□□□□ 0.35
TRPM1-203ENST00000542188 TRIM29Q14134 588 aa17.27■□□□□ 0.35
TRPM1-203ENST00000542188 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
TRPM1-203ENST00000542188 KRI1Q8N9T8 703 aaKnown RBP17.26■□□□□ 0.35
TRPM1-203ENST00000542188 CPLX2Q6PUV4 134 aaKnown RBP17.26■□□□□ 0.35
TRPM1-203ENST00000542188 MYO6Q9UM54 1294 aa17.26■□□□□ 0.35
TRPM1-203ENST00000542188 WWC1Q8IX03 1113 aa17.24■□□□□ 0.35
TRPM1-203ENST00000542188 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
TRPM1-203ENST00000542188 TCEAL9Q9UHQ7 104 aa17.24■□□□□ 0.35
TRPM1-203ENST00000542188 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
TRPM1-203ENST00000542188 LRRFIP1Q32MZ4 808 aaKnown RBP17.23■□□□□ 0.35
TRPM1-203ENST00000542188 MCTP1Q6DN14 999 aa17.23■□□□□ 0.35
TRPM1-203ENST00000542188 ZRSR2Q15696 482 aaKnown RBP17.23■□□□□ 0.35
TRPM1-203ENST00000542188 CCDC39Q9UFE4 941 aa17.23■□□□□ 0.35
TRPM1-203ENST00000542188 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
TRPM1-203ENST00000542188 SLC4A10Q6U841 1118 aa17.22■□□□□ 0.35
TRPM1-203ENST00000542188 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
TRPM1-203ENST00000542188 CSB-PGBD3P0DP91 1061 aa17.22■□□□□ 0.35
TRPM1-203ENST00000542188 NAP1L1P55209 391 aaKnown RBP17.21■□□□□ 0.35
TRPM1-203ENST00000542188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRPM1-203ENST00000542188 EIF3AQ14152 1382 aaKnown RBP17.2■□□□□ 0.34
TRPM1-203ENST00000542188 LEKR1Q6ZMV7 388 aa17.2■□□□□ 0.34
TRPM1-203ENST00000542188 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
TRPM1-203ENST00000542188 RUFY2Q8WXA3 655 aa17.2■□□□□ 0.34
TRPM1-203ENST00000542188 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
TRPM1-203ENST00000542188 PDE4AP27815 886 aa17.19■□□□□ 0.34
TRPM1-203ENST00000542188 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
TRPM1-203ENST00000542188 CT47A1Q5JQC4 288 aaPredicted RBP17.19■□□□□ 0.34
TRPM1-203ENST00000542188 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
TRPM1-203ENST00000542188 ODF2Q5BJF6 829 aa17.19■□□□□ 0.34
TRPM1-203ENST00000542188 CHMP5Q9NZZ3 219 aa17.19■□□□□ 0.34
TRPM1-203ENST00000542188 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
TRPM1-203ENST00000542188 PKNOX2Q96KN3 472 aa17.18■□□□□ 0.34
TRPM1-203ENST00000542188 AMOTL1Q8IY63 956 aa17.18■□□□□ 0.34
TRPM1-203ENST00000542188 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
TRPM1-203ENST00000542188 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
TRPM1-203ENST00000542188 REC8O95072 547 aa17.17■□□□□ 0.34
TRPM1-203ENST00000542188 PLCD4Q9BRC7 762 aa17.17■□□□□ 0.34
TRPM1-203ENST00000542188 CCP110O43303 1012 aa17.16■□□□□ 0.34
TRPM1-203ENST00000542188 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
TRPM1-203ENST00000542188 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
TRPM1-203ENST00000542188 HSP90AB3PQ58FF7 597 aa17.15■□□□□ 0.34
TRPM1-203ENST00000542188 TSPYL1Q9H0U9 437 aa17.15■□□□□ 0.34
TRPM1-203ENST00000542188 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
TRPM1-203ENST00000542188 TNIKQ9UKE5 1360 aa17.15■□□□□ 0.34
TRPM1-203ENST00000542188 FOXD4L6Q3SYB3 417 aaPredicted RBP17.15■□□□□ 0.34
TRPM1-203ENST00000542188 FOXD4L3Q6VB84 417 aaPredicted RBP17.15■□□□□ 0.34
TRPM1-203ENST00000542188 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
TRPM1-203ENST00000542188 NAT10Q9H0A0 1025 aaKnown RBP17.15■□□□□ 0.34
TRPM1-203ENST00000542188 FANCIQ9NVI1 1328 aa17.14■□□□□ 0.33
TRPM1-203ENST00000542188 NUCB2P80303 420 aa17.14■□□□□ 0.33
TRPM1-203ENST00000542188 R3HCC1Q9Y3T6 440 aaKnown RBP17.14■□□□□ 0.33
TRPM1-203ENST00000542188 SAFB2Q14151 953 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRPM1-203ENST00000542188 GOLGA6L7A0A1B0GV03 622 aa17.13■□□□□ 0.33
TRPM1-203ENST00000542188 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
TRPM1-203ENST00000542188 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
TRPM1-203ENST00000542188 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
TRPM1-203ENST00000542188 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
TRPM1-203ENST00000542188 CPLX1O14810 134 aa17.12■□□□□ 0.33
TRPM1-203ENST00000542188 CTDP1Q9Y5B0 961 aaPredicted RBP17.12■□□□□ 0.33
TRPM1-203ENST00000542188 STK11IPQ8N1F8 1099 aa17.12■□□□□ 0.33
TRPM1-203ENST00000542188 ANO2Q9NQ90 1003 aa17.12■□□□□ 0.33
TRPM1-203ENST00000542188 OLFM4Q6UX06 510 aa17.12■□□□□ 0.33
TRPM1-203ENST00000542188 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
TRPM1-203ENST00000542188 NOL10Q9BSC4 688 aaKnown RBP17.12■□□□□ 0.33
TRPM1-203ENST00000542188 SETD5Q9C0A6 1442 aa17.11■□□□□ 0.33
TRPM1-203ENST00000542188 INCENPQ9NQS7 918 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms