RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 ZNF622Q969S3 477 aaKnown RBP eCLIP6.83□□□□□ -1.32
SNHG1-218ENST00000541615 GOLGA6L3A6NEY3 463 aa6.82□□□□□ -1.32
SNHG1-218ENST00000541615 CLCN1P35523 988 aa6.82□□□□□ -1.32
SNHG1-218ENST00000541615 PSEN1P49768 467 aa6.82□□□□□ -1.32
SNHG1-218ENST00000541615 KIF20AO95235 890 aa6.81□□□□□ -1.32
SNHG1-218ENST00000541615 SETQ01105 290 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-218ENST00000541615 ILDR1Q86SU0 546 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-218ENST00000541615 SPOCK2Q92563 424 aa6.81□□□□□ -1.32
SNHG1-218ENST00000541615 L3MBTL3Q96JM7 780 aaPredicted RBP6.81□□□□□ -1.32
SNHG1-218ENST00000541615 BRPF3Q9ULD4 1205 aa6.81□□□□□ -1.32
SNHG1-218ENST00000541615 TERF1P54274 439 aa6.8□□□□□ -1.32
SNHG1-218ENST00000541615 PDAP1Q13442 181 aaKnown RBP6.8□□□□□ -1.32
SNHG1-218ENST00000541615 C3orf67Q6ZVT6 689 aa6.8□□□□□ -1.32
SNHG1-218ENST00000541615 IFNLR1Q8IU57 520 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-218ENST00000541615 SECISBP2LQ93073 1101 aaKnown RBP6.8□□□□□ -1.32
SNHG1-218ENST00000541615 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
SNHG1-218ENST00000541615 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-218ENST00000541615 MMP14P50281 582 aa6.79□□□□□ -1.32
SNHG1-218ENST00000541615 GRIPAP1Q4V328 841 aa6.79□□□□□ -1.32
SNHG1-218ENST00000541615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.79□□□□□ -1.32
SNHG1-218ENST00000541615 EEA1Q15075 1411 aa6.78□□□□□ -1.32
SNHG1-218ENST00000541615 CCER2I3L3R5 266 aa6.78□□□□□ -1.32
SNHG1-218ENST00000541615 PHF14O94880 888 aa6.78□□□□□ -1.32
SNHG1-218ENST00000541615 IRX3P78415 501 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-218ENST00000541615 TMEM132AQ24JP5 1023 aa6.78□□□□□ -1.32
SNHG1-218ENST00000541615 CEP120Q8N960 986 aa6.78□□□□□ -1.32
SNHG1-218ENST00000541615 PLCD4Q9BRC7 762 aa6.78□□□□□ -1.32
SNHG1-218ENST00000541615 RGS3P49796 1198 aa6.77□□□□□ -1.33
SNHG1-218ENST00000541615 SLC20A2Q08357 652 aa6.76□□□□□ -1.33
SNHG1-218ENST00000541615 PUS7Q96PZ0 661 aaKnown RBP6.76□□□□□ -1.33
SNHG1-218ENST00000541615 GTPBP4Q9BZE4 634 aaKnown RBP6.76□□□□□ -1.33
SNHG1-218ENST00000541615 CIZ1Q9ULV3 898 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-218ENST00000541615 LETM1O95202 739 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-218ENST00000541615 ITGAEP38570 1179 aa6.75□□□□□ -1.33
SNHG1-218ENST00000541615 RGS22Q8NE09 1264 aa6.75□□□□□ -1.33
SNHG1-218ENST00000541615 FAM193AP78312 1265 aa6.74□□□□□ -1.33
SNHG1-218ENST00000541615 APPP05067 770 aa6.73□□□□□ -1.33
SNHG1-218ENST00000541615 CNPY4Q8N129 248 aa6.73□□□□□ -1.33
SNHG1-218ENST00000541615 PSMD1Q99460 953 aa6.73□□□□□ -1.33
SNHG1-218ENST00000541615 DMTNQ08495 405 aa6.72□□□□□ -1.33
SNHG1-218ENST00000541615 TSPYL1Q9H0U9 437 aa6.72□□□□□ -1.33
SNHG1-218ENST00000541615 YY1AP1Q9H869 796 aa6.72□□□□□ -1.33
SNHG1-218ENST00000541615 CABP2Q9NPB3 220 aa6.72□□□□□ -1.33
SNHG1-218ENST00000541615 TMEM51Q9NW97 253 aa6.72□□□□□ -1.33
SNHG1-218ENST00000541615 WWC1Q8IX03 1113 aa6.71□□□□□ -1.34
SNHG1-218ENST00000541615 MARVELD3Q96A59 401 aa6.71□□□□□ -1.34
SNHG1-218ENST00000541615 DNAJC2Q99543 621 aaKnown RBP6.71□□□□□ -1.34
SNHG1-218ENST00000541615 TCERG1O14776 1098 aaKnown RBP6.7□□□□□ -1.34
SNHG1-218ENST00000541615 PPP4R3BQ5MIZ7 849 aa6.7□□□□□ -1.34
SNHG1-218ENST00000541615 DNTTIP2Q5QJE6 756 aaKnown RBP6.7□□□□□ -1.34
SNHG1-218ENST00000541615 FRAT1Q92837 279 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-218ENST00000541615 ISY1Q9ULR0 285 aaKnown RBP6.7□□□□□ -1.34
SNHG1-218ENST00000541615 HDAC5Q9UQL6 1122 aa6.7□□□□□ -1.34
SNHG1-218ENST00000541615 BOLA1Q9Y3E2 137 aa6.7□□□□□ -1.34
SNHG1-218ENST00000541615 G3V3G9 751 aa6.69□□□□□ -1.34
SNHG1-218ENST00000541615 DPY19L2Q6NUT2 758 aa6.69□□□□□ -1.34
SNHG1-218ENST00000541615 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.69□□□□□ -1.34
SNHG1-218ENST00000541615 EMP3P54852 163 aa6.68□□□□□ -1.34
SNHG1-218ENST00000541615 CC2D1BQ5T0F9 858 aaKnown RBP6.68□□□□□ -1.34
SNHG1-218ENST00000541615 GEMIN8Q9NWZ8 242 aaKnown RBP6.68□□□□□ -1.34
SNHG1-218ENST00000541615 SPNS2Q8IVW8 549 aa6.67□□□□□ -1.34
SNHG1-218ENST00000541615 RRAGDQ9NQL2 400 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-218ENST00000541615 PATL2C9JE40 543 aaKnown RBP6.66□□□□□ -1.34
SNHG1-218ENST00000541615 MS4A1P11836 297 aa6.66□□□□□ -1.34
SNHG1-218ENST00000541615 MMRN1Q13201 1228 aa6.66□□□□□ -1.34
SNHG1-218ENST00000541615 RALBP1Q15311 655 aa6.66□□□□□ -1.34
SNHG1-218ENST00000541615 NBPF20Q3BBV1 942 aa6.66□□□□□ -1.34
SNHG1-218ENST00000541615 ZNF830Q96NB3 372 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-218ENST00000541615 WRNQ14191 1432 aaPredicted RBP eCLIP6.66□□□□□ -1.34
SNHG1-218ENST00000541615 NFKBIBQ15653 356 aa6.65□□□□□ -1.34
SNHG1-218ENST00000541615 ZNF592Q92610 1267 aa6.65□□□□□ -1.34
SNHG1-218ENST00000541615 EFCAB3Q8N7B9 438 aa6.64□□□□□ -1.35
SNHG1-218ENST00000541615 HS3ST6Q96QI5 342 aa6.64□□□□□ -1.35
SNHG1-218ENST00000541615 HOXB3P14651 431 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-218ENST00000541615 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-218ENST00000541615 CC2D2BQ6DHV5 1058 aa6.63□□□□□ -1.35
SNHG1-218ENST00000541615 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
SNHG1-218ENST00000541615 FAM205CA6NFA0 338 aa6.62□□□□□ -1.35
SNHG1-218ENST00000541615 RIOK3O14730 519 aaKnown RBP6.62□□□□□ -1.35
SNHG1-218ENST00000541615 PLCB2Q00722 1185 aa6.62□□□□□ -1.35
SNHG1-218ENST00000541615 DOK7Q18PE1 504 aa6.62□□□□□ -1.35
SNHG1-218ENST00000541615 HSP90AB3PQ58FF7 597 aa6.62□□□□□ -1.35
SNHG1-218ENST00000541615 POTEB3A0JP26 581 aa6.61□□□□□ -1.35
SNHG1-218ENST00000541615 DYNC1I1O14576 645 aa6.61□□□□□ -1.35
SNHG1-218ENST00000541615 SOX12O15370 315 aa6.61□□□□□ -1.35
SNHG1-218ENST00000541615 MAFGO15525 162 aa6.61□□□□□ -1.35
SNHG1-218ENST00000541615 HOXB1P14653 301 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-218ENST00000541615 CALRP27797 417 aaKnown RBP6.61□□□□□ -1.35
SNHG1-218ENST00000541615 POTEBQ6S5H4 581 aa6.61□□□□□ -1.35
SNHG1-218ENST00000541615 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
SNHG1-218ENST00000541615 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
SNHG1-218ENST00000541615 RBM28Q9NW13 759 aaKnown RBP6.61□□□□□ -1.35
SNHG1-218ENST00000541615 CCDC66A2RUB6 948 aa6.6□□□□□ -1.35
SNHG1-218ENST00000541615 ESPNB1AK53 854 aa6.6□□□□□ -1.35
SNHG1-218ENST00000541615 ANP32CO43423 234 aa6.6□□□□□ -1.35
SNHG1-218ENST00000541615 CTR9Q6PD62 1173 aa6.6□□□□□ -1.35
SNHG1-218ENST00000541615 ZNF710Q8N1W2 664 aa6.6□□□□□ -1.35
SNHG1-218ENST00000541615 RNF25Q96BH1 459 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-218ENST00000541615 CCDC94Q9BW85 323 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-218ENST00000541615 EFCC1Q9HA90 598 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms