RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 L3MBTL2Q969R5 705 aa8.09□□□□□ -1.11
LSAMP-207ENST00000539563 ATAD2BQ9ULI0 1458 aa8.09□□□□□ -1.11
LSAMP-207ENST00000539563 CLSTN1O94985 981 aa8.09□□□□□ -1.11
LSAMP-207ENST00000539563 FANCD2Q9BXW9 1451 aa8.09□□□□□ -1.11
LSAMP-207ENST00000539563 PHF14O94880 888 aa8.09□□□□□ -1.11
LSAMP-207ENST00000539563 MYBBP1AQ9BQG0 1328 aaKnown RBP8.08□□□□□ -1.12
LSAMP-207ENST00000539563 CHMP3Q9Y3E7 222 aa8.08□□□□□ -1.12
LSAMP-207ENST00000539563 CHMP4CQ96CF2 233 aa8.08□□□□□ -1.12
LSAMP-207ENST00000539563 KIF3AQ9Y496 699 aa8.08□□□□□ -1.12
LSAMP-207ENST00000539563 DEKP35659 375 aaKnown RBP8.08□□□□□ -1.12
LSAMP-207ENST00000539563 ST18O60284 1047 aa8.07□□□□□ -1.12
LSAMP-207ENST00000539563 HSP90B1P14625 803 aaKnown RBP8.07□□□□□ -1.12
LSAMP-207ENST00000539563 EVC2Q86UK5 1308 aa8.07□□□□□ -1.12
LSAMP-207ENST00000539563 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
LSAMP-207ENST00000539563 RTN4Q9NQC3 1192 aaKnown RBP8.06□□□□□ -1.12
LSAMP-207ENST00000539563 SLC4A10Q6U841 1118 aa8.06□□□□□ -1.12
LSAMP-207ENST00000539563 VGFO15240 615 aaPredicted RBP8.06□□□□□ -1.12
LSAMP-207ENST00000539563 G3V3G9 751 aa8.06□□□□□ -1.12
LSAMP-207ENST00000539563 DCAF8Q5TAQ9 597 aa8.06□□□□□ -1.12
LSAMP-207ENST00000539563 MFAP1P55081 439 aaKnown RBP8.06□□□□□ -1.12
LSAMP-207ENST00000539563 CCDC146Q8IYE0 955 aa8.06□□□□□ -1.12
LSAMP-207ENST00000539563 CGNL1Q0VF96 1302 aa8.05□□□□□ -1.12
LSAMP-207ENST00000539563 USP35Q9P2H5 1018 aa8.05□□□□□ -1.12
LSAMP-207ENST00000539563 CCDC9Q9Y3X0 531 aaKnown RBP8.05□□□□□ -1.12
LSAMP-207ENST00000539563 CENPQQ7L2Z9 268 aaPredicted RBP8.05□□□□□ -1.12
LSAMP-207ENST00000539563 TRAK1Q9UPV9 953 aa8.05□□□□□ -1.12
LSAMP-207ENST00000539563 KIF16BQ96L93 1317 aa8.05□□□□□ -1.12
LSAMP-207ENST00000539563 LRRFIP1Q32MZ4 808 aaKnown RBP8.05□□□□□ -1.12
LSAMP-207ENST00000539563 IPO9Q96P70 1041 aaKnown RBP8.04□□□□□ -1.12
LSAMP-207ENST00000539563 C1orf141Q5JVX7 400 aa8.04□□□□□ -1.12
LSAMP-207ENST00000539563 NGEFQ8N5V2 710 aa8.04□□□□□ -1.12
LSAMP-207ENST00000539563 E9PSI1 815 aa8.04□□□□□ -1.12
LSAMP-207ENST00000539563 COG3Q96JB2 828 aa8.04□□□□□ -1.12
LSAMP-207ENST00000539563 GOLGA6L3A6NEY3 463 aa8.03□□□□□ -1.12
LSAMP-207ENST00000539563 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.03□□□□□ -1.12
LSAMP-207ENST00000539563 PANK3Q9H999 370 aa8.03□□□□□ -1.12
LSAMP-207ENST00000539563 GAPVD1Q14C86 1478 aa8.03□□□□□ -1.12
LSAMP-207ENST00000539563 NOC3LQ8WTT2 800 aaKnown RBP8.03□□□□□ -1.12
LSAMP-207ENST00000539563 PTPRGP23470 1445 aa8.03□□□□□ -1.12
LSAMP-207ENST00000539563 SLKQ9H2G2 1235 aaPredicted RBP8.03□□□□□ -1.12
LSAMP-207ENST00000539563 DDX11L8A8MPP1 907 aa8.02□□□□□ -1.13
LSAMP-207ENST00000539563 ROCK1Q13464 1354 aa8.02□□□□□ -1.13
LSAMP-207ENST00000539563 STAC3Q96MF2 364 aa8.02□□□□□ -1.13
LSAMP-207ENST00000539563 GZF1Q9H116 711 aaPredicted RBP8.02□□□□□ -1.13
LSAMP-207ENST00000539563 MYOM3Q5VTT5 1437 aa8.02□□□□□ -1.13
LSAMP-207ENST00000539563 ST20-MTHFSA0A0A6YYL1 179 aa8.02□□□□□ -1.13
LSAMP-207ENST00000539563 EVA1CP58658 441 aa8.01□□□□□ -1.13
LSAMP-207ENST00000539563 USP47Q96K76 1375 aa8.01□□□□□ -1.13
LSAMP-207ENST00000539563 SF3A1Q15459 793 aaKnown RBP8.01□□□□□ -1.13
LSAMP-207ENST00000539563 LTV1Q96GA3 475 aaPredicted RBP8.01□□□□□ -1.13
LSAMP-207ENST00000539563 FRAT2O75474 233 aaPredicted RBP8.01□□□□□ -1.13
LSAMP-207ENST00000539563 DHX57Q6P158 1386 aaKnown RBP8.01□□□□□ -1.13
LSAMP-207ENST00000539563 GTF2E1P29083 439 aaPredicted RBP8.01□□□□□ -1.13
LSAMP-207ENST00000539563 RASSF8Q8NHQ8 419 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 ZKSCAN2Q63HK3 967 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 CLUAP1Q96AJ1 413 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 ATP6V1DQ9Y5K8 247 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 ABCF1Q8NE71 845 aaKnown RBP eCLIP8□□□□□ -1.13
LSAMP-207ENST00000539563 KIF21BO75037 1637 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 NUTM2DQ5VT03 806 aaPredicted RBP8□□□□□ -1.13
LSAMP-207ENST00000539563 GOLGA6L1Q8N7Z2 621 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 ZBED9Q6R2W3 1325 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 H3BQV1 296 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 IFFO2Q5TF58 517 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 RUFY2Q8WXA3 655 aa8□□□□□ -1.13
LSAMP-207ENST00000539563 FAM161AQ3B820 660 aa7.99□□□□□ -1.13
LSAMP-207ENST00000539563 FAM184AQ8NB25 1140 aa7.99□□□□□ -1.13
LSAMP-207ENST00000539563 FGD5Q6ZNL6 1462 aa7.99□□□□□ -1.13
LSAMP-207ENST00000539563 SKOR2Q2VWA4 1001 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-207ENST00000539563 ANKRD45Q5TZF3 282 aa7.99□□□□□ -1.13
LSAMP-207ENST00000539563 NEXNQ0ZGT2 675 aa7.99□□□□□ -1.13
LSAMP-207ENST00000539563 TEFQ10587 303 aa7.99□□□□□ -1.13
LSAMP-207ENST00000539563 RILPL2Q969X0 211 aa7.99□□□□□ -1.13
LSAMP-207ENST00000539563 AKAP17AQ02040 695 aaKnown RBP7.98□□□□□ -1.13
LSAMP-207ENST00000539563 MARCH6O60337 910 aa7.98□□□□□ -1.13
LSAMP-207ENST00000539563 SYNE3Q6ZMZ3 975 aa7.98□□□□□ -1.13
LSAMP-207ENST00000539563 AMOTL1Q8IY63 956 aa7.98□□□□□ -1.13
LSAMP-207ENST00000539563 CEP89Q96ST8 783 aa7.98□□□□□ -1.13
LSAMP-207ENST00000539563 DDX58O95786 925 aaKnown RBP7.98□□□□□ -1.13
LSAMP-207ENST00000539563 RRP1P56182 461 aaKnown RBP7.98□□□□□ -1.13
LSAMP-207ENST00000539563 TSR1Q2NL82 804 aaKnown RBP7.98□□□□□ -1.13
LSAMP-207ENST00000539563 MIA2Q96PC5 1412 aa7.97□□□□□ -1.13
LSAMP-207ENST00000539563 CPLX2Q6PUV4 134 aaKnown RBP7.97□□□□□ -1.13
LSAMP-207ENST00000539563 TPM3P06753 285 aa7.97□□□□□ -1.13
LSAMP-207ENST00000539563 TPM2P07951 284 aa7.97□□□□□ -1.13
LSAMP-207ENST00000539563 TPD52L1Q16890 204 aaPredicted RBP7.97□□□□□ -1.13
LSAMP-207ENST00000539563 RUSC2Q8N2Y8 1516 aa7.97□□□□□ -1.13
LSAMP-207ENST00000539563 DDX19BQ9UMR2 479 aa7.97□□□□□ -1.13
LSAMP-207ENST00000539563 NOL10Q9BSC4 688 aaKnown RBP7.97□□□□□ -1.13
LSAMP-207ENST00000539563 GOLGA6L19H0YKK7 550 aa7.97□□□□□ -1.13
LSAMP-207ENST00000539563 DIAPH1O60610 1272 aaKnown RBP7.96□□□□□ -1.13
LSAMP-207ENST00000539563 TOMM22Q9NS69 142 aa7.96□□□□□ -1.13
LSAMP-207ENST00000539563 NUTM2FA1L443 756 aa7.96□□□□□ -1.13
LSAMP-207ENST00000539563 PRKRIP1Q9H875 184 aaPredicted RBP7.96□□□□□ -1.13
LSAMP-207ENST00000539563 RRP7AQ9Y3A4 280 aaKnown RBP7.96□□□□□ -1.13
LSAMP-207ENST00000539563 PEG3Q9GZU2 1588 aa7.96□□□□□ -1.13
LSAMP-207ENST00000539563 NCBP3Q53F19 620 aaKnown RBP7.96□□□□□ -1.14
LSAMP-207ENST00000539563 TTC5Q8N0Z6 440 aa7.96□□□□□ -1.14
LSAMP-207ENST00000539563 REC8O95072 547 aa7.96□□□□□ -1.14
LSAMP-207ENST00000539563 C9orf78Q9NZ63 289 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms