RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 MPHOSPH9Q99550 1183 aa7.65□□□□□ -1.18
RAB3GAP1-207ENST00000539493 NCOA1Q15788 1441 aa7.65□□□□□ -1.18
RAB3GAP1-207ENST00000539493 VGFO15240 615 aaPredicted RBP7.65□□□□□ -1.18
RAB3GAP1-207ENST00000539493 KDM5BQ9UGL1 1544 aa7.65□□□□□ -1.19
RAB3GAP1-207ENST00000539493 STAC3Q96MF2 364 aa7.65□□□□□ -1.19
RAB3GAP1-207ENST00000539493 ADGBQ8N7X0 1667 aa7.64□□□□□ -1.19
RAB3GAP1-207ENST00000539493 ABCC2Q92887 1545 aa7.64□□□□□ -1.19
RAB3GAP1-207ENST00000539493 NAP1L5Q96NT1 182 aaPredicted RBP7.64□□□□□ -1.19
RAB3GAP1-207ENST00000539493 CLCN1P35523 988 aa7.63□□□□□ -1.19
RAB3GAP1-207ENST00000539493 BBXQ8WY36 941 aaPredicted RBP7.63□□□□□ -1.19
RAB3GAP1-207ENST00000539493 SHANK2Q9UPX8 1470 aa7.63□□□□□ -1.19
RAB3GAP1-207ENST00000539493 ANKRD30AQ9BXX3 1397 aa7.62□□□□□ -1.19
RAB3GAP1-207ENST00000539493 TEX2Q8IWB9 1127 aa7.62□□□□□ -1.19
RAB3GAP1-207ENST00000539493 RRAGDQ9NQL2 400 aaPredicted RBP7.62□□□□□ -1.19
RAB3GAP1-207ENST00000539493 FOXD1Q16676 465 aa7.62□□□□□ -1.19
RAB3GAP1-207ENST00000539493 PREX2Q70Z35 1606 aa7.62□□□□□ -1.19
RAB3GAP1-207ENST00000539493 PAXIP1Q6ZW49 1069 aaPredicted RBP7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 C9orf84Q5VXU9 1444 aa7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 ANKRD30BQ9BXX2 1392 aa7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 NCLP19338 710 aaKnown RBP7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 CHMP4AQ9BY43 222 aa7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 PZPP20742 1482 aa7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 MBD5Q9P267 1494 aa7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 CDC42BPBQ9Y5S2 1711 aa7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 SAMD9LQ8IVG5 1584 aa7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 SLC4A1APQ9BWU0 796 aaKnown RBP7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 BCCIPQ9P287 314 aaKnown RBP eCLIP7.61□□□□□ -1.19
RAB3GAP1-207ENST00000539493 ARHGEF5Q12774 1597 aa7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 TTC37Q6PGP7 1564 aa7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 ANKRD50Q9ULJ7 1429 aa7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 SMAP1Q8IYB5 467 aaPredicted RBP7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 FRAT1Q92837 279 aaPredicted RBP7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 UHRF1BP1LA0JNW5 1464 aa7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 RPRD2Q5VT52 1461 aaKnown RBP7.6□□□□□ -1.19
RAB3GAP1-207ENST00000539493 TPM2P07951 284 aa7.59□□□□□ -1.19
RAB3GAP1-207ENST00000539493 CANXP27824 592 aaKnown RBP7.59□□□□□ -1.19
RAB3GAP1-207ENST00000539493 HNRNPMP52272 730 aaKnown RBP eCLIP7.59□□□□□ -1.192e-7■■■■■ 27
RAB3GAP1-207ENST00000539493 UTP14CQ5TAP6 766 aaKnown RBP7.59□□□□□ -1.19
RAB3GAP1-207ENST00000539493 DCAF11Q8TEB1 546 aa7.59□□□□□ -1.19
RAB3GAP1-207ENST00000539493 HIRIP3Q9BW71 556 aaPredicted RBP7.59□□□□□ -1.19
RAB3GAP1-207ENST00000539493 TSPY4P0CV99 314 aa7.59□□□□□ -1.2
RAB3GAP1-207ENST00000539493 TSPY10P0CW01 314 aa7.59□□□□□ -1.2
RAB3GAP1-207ENST00000539493 FTSJ3Q8IY81 847 aaKnown RBP7.59□□□□□ -1.2
RAB3GAP1-207ENST00000539493 CCDC141Q6ZP82 1450 aa7.58□□□□□ -1.2
RAB3GAP1-207ENST00000539493 ARID4BQ4LE39 1312 aaPredicted RBP7.58□□□□□ -1.2
RAB3GAP1-207ENST00000539493 ZCCHC11Q5TAX3 1644 aaKnown RBP7.58□□□□□ -1.2
RAB3GAP1-207ENST00000539493 RGS3P49796 1198 aa7.58□□□□□ -1.2
RAB3GAP1-207ENST00000539493 SAMD1Q6SPF0 538 aaPredicted RBP7.58□□□□□ -1.2
RAB3GAP1-207ENST00000539493 ARHGAP5Q13017 1502 aa7.57□□□□□ -1.2
RAB3GAP1-207ENST00000539493 TEX14Q8IWB6 1497 aa7.57□□□□□ -1.2
RAB3GAP1-207ENST00000539493 L3MBTL2Q969R5 705 aa7.57□□□□□ -1.2
RAB3GAP1-207ENST00000539493 SYCP2Q9BX26 1530 aa7.57□□□□□ -1.2
RAB3GAP1-207ENST00000539493 KIF15Q9NS87 1388 aa7.57□□□□□ -1.2
RAB3GAP1-207ENST00000539493 DDX10Q13206 875 aaKnown RBP7.57□□□□□ -1.2
RAB3GAP1-207ENST00000539493 CHMP4BQ9H444 224 aaKnown RBP7.57□□□□□ -1.2
RAB3GAP1-207ENST00000539493 KIAA1107Q9UPP5 1409 aa7.56□□□□□ -1.2
RAB3GAP1-207ENST00000539493 CNGB1Q14028 1251 aaPredicted RBP7.56□□□□□ -1.2
RAB3GAP1-207ENST00000539493 CNKSR2Q8WXI2 1034 aa7.56□□□□□ -1.2
RAB3GAP1-207ENST00000539493 MYO5CQ9NQX4 1742 aa7.56□□□□□ -1.2
RAB3GAP1-207ENST00000539493 MAP7D2Q96T17 732 aa7.56□□□□□ -1.2
RAB3GAP1-207ENST00000539493 KDM5DQ9BY66 1539 aa7.56□□□□□ -1.2
RAB3GAP1-207ENST00000539493 PKD2Q13563 968 aa7.55□□□□□ -1.2
RAB3GAP1-207ENST00000539493 PNNQ9H307 717 aaKnown RBP7.55□□□□□ -1.2
RAB3GAP1-207ENST00000539493 NUP155O75694 1391 aa7.55□□□□□ -1.2
RAB3GAP1-207ENST00000539493 PLCH2O75038 1416 aa7.55□□□□□ -1.2
RAB3GAP1-207ENST00000539493 MAST1Q9Y2H9 1570 aa7.55□□□□□ -1.2
RAB3GAP1-207ENST00000539493 PLEKHH2Q8IVE3 1493 aa7.54□□□□□ -1.2
RAB3GAP1-207ENST00000539493 NFKBIBQ15653 356 aa7.54□□□□□ -1.2
RAB3GAP1-207ENST00000539493 TERF1P54274 439 aa7.54□□□□□ -1.2
RAB3GAP1-207ENST00000539493 ARHGEF12Q9NZN5 1544 aa7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 ZFP91Q96JP5 570 aaPredicted RBP7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 TMEM51Q9NW97 253 aa7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 RNF123Q5XPI4 1314 aa7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 NBPF8Q3BBV2 869 aa7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 DHX37Q8IY37 1157 aaKnown RBP7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 RNF216Q9NWF9 866 aaPredicted RBP7.53□□□□□ -1.2
RAB3GAP1-207ENST00000539493 PLXNC1O60486 1568 aa7.52□□□□□ -1.21
RAB3GAP1-207ENST00000539493 EIF4G2P78344 907 aaKnown RBP eCLIP7.52□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ABCC1P33527 1531 aa7.51□□□□□ -1.21
RAB3GAP1-207ENST00000539493 L1TD1Q5T7N2 865 aaKnown RBP7.51□□□□□ -1.21
RAB3GAP1-207ENST00000539493 FAM135AQ9P2D6 1515 aa7.51□□□□□ -1.21
RAB3GAP1-207ENST00000539493 DDRGK1Q96HY6 314 aa7.51□□□□□ -1.21
RAB3GAP1-207ENST00000539493 WDR7Q9Y4E6 1490 aa7.51□□□□□ -1.21
RAB3GAP1-207ENST00000539493 EFCAB2Q5VUJ9 269 aa7.51□□□□□ -1.21
RAB3GAP1-207ENST00000539493 NPM2Q86SE8 214 aaKnown RBP7.51□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ARAP3Q8WWN8 1544 aa7.5□□□□□ -1.21
RAB3GAP1-207ENST00000539493 UNC13BO14795 1591 aa7.5□□□□□ -1.21
RAB3GAP1-207ENST00000539493 MS4A1P11836 297 aa7.5□□□□□ -1.21
RAB3GAP1-207ENST00000539493 LAS1LQ9Y4W2 734 aaKnown RBP7.5□□□□□ -1.21
RAB3GAP1-207ENST00000539493 HSP90B1P14625 803 aaKnown RBP7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 DMTNQ08495 405 aa7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 SPATA31E1Q6ZUB1 1445 aa7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 TRAPPC8Q9Y2L5 1435 aa7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 DUOX2Q9NRD8 1548 aa7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 MMP14P50281 582 aa7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 TULP1O00294 542 aaPredicted RBP7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 ANP32CO43423 234 aa7.49□□□□□ -1.21
RAB3GAP1-207ENST00000539493 B4GALNT3Q6L9W6 998 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms