RNA–Protein interactions for RNA: ENST00000539029.5

PTPN6-212, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 705 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-212ENST00000539029 PHLPP1O60346 1717 aa16.36■□□□□ 0.21
PTPN6-212ENST00000539029 LRP5O75197 1615 aa16.36■□□□□ 0.21
PTPN6-212ENST00000539029 SPATA31A6Q5VVP1 1343 aa16.35■□□□□ 0.21
PTPN6-212ENST00000539029 NUTM2BA6NNL0 878 aaPredicted RBP16.34■□□□□ 0.21
PTPN6-212ENST00000539029 NUTM2EB1AL46 878 aaPredicted RBP16.34■□□□□ 0.21
PTPN6-212ENST00000539029 NUTM2DQ5VT03 806 aaPredicted RBP16.34■□□□□ 0.21
PTPN6-212ENST00000539029 NUTM2AQ8IVF1 878 aaPredicted RBP16.34■□□□□ 0.21
PTPN6-212ENST00000539029 RGS12O14924 1447 aa16.34■□□□□ 0.21
PTPN6-212ENST00000539029 TNRQ92752 1358 aa16.33■□□□□ 0.2
PTPN6-212ENST00000539029 KDM5DQ9BY66 1539 aa16.31■□□□□ 0.2
PTPN6-212ENST00000539029 FAM135AQ9P2D6 1515 aa16.3■□□□□ 0.2
PTPN6-212ENST00000539029 LRRC9Q6ZRR7 1453 aa16.3■□□□□ 0.2
PTPN6-212ENST00000539029 PRXQ9BXM0 1461 aa16.3■□□□□ 0.2
PTPN6-212ENST00000539029 ATAD2Q6PL18 1390 aa16.3■□□□□ 0.2
PTPN6-212ENST00000539029 CSRNP3Q8WYN3 585 aa16.29■□□□□ 0.2
PTPN6-212ENST00000539029 ZC3H13Q5T200 1668 aaKnown RBP16.28■□□□□ 0.2
PTPN6-212ENST00000539029 YY1P25490 414 aa16.28■□□□□ 0.2
PTPN6-212ENST00000539029 GGT6Q6P531 493 aa16.28■□□□□ 0.2
PTPN6-212ENST00000539029 UGGT1Q9NYU2 1555 aa16.28■□□□□ 0.2
PTPN6-212ENST00000539029 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
PTPN6-212ENST00000539029 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
PTPN6-212ENST00000539029 KIF14Q15058 1648 aa16.24■□□□□ 0.19
PTPN6-212ENST00000539029 RBM6P78332 1123 aaKnown RBP16.24■□□□□ 0.19
PTPN6-212ENST00000539029 FBXO31Q5XUX0 539 aaPredicted RBP16.24■□□□□ 0.19
PTPN6-212ENST00000539029 PLXNC1O60486 1568 aa16.24■□□□□ 0.19
PTPN6-212ENST00000539029 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
PTPN6-212ENST00000539029 NLRP1Q9C000 1473 aa16.23■□□□□ 0.19
PTPN6-212ENST00000539029 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
PTPN6-212ENST00000539029 AFF2P51816 1311 aa16.22■□□□□ 0.19
PTPN6-212ENST00000539029 TMEM94Q12767 1356 aa16.21■□□□□ 0.19
PTPN6-212ENST00000539029 SHPRHQ149N8 1683 aa16.21■□□□□ 0.18
PTPN6-212ENST00000539029 CCDC125Q86Z20 511 aa16.2■□□□□ 0.18
PTPN6-212ENST00000539029 SAMD9LQ8IVG5 1584 aa16.2■□□□□ 0.18
PTPN6-212ENST00000539029 A2MP01023 1474 aa16.18■□□□□ 0.18
PTPN6-212ENST00000539029 PZPP20742 1482 aa16.18■□□□□ 0.18
PTPN6-212ENST00000539029 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
PTPN6-212ENST00000539029 EP400Q96L91 3159 aa16.18■□□□□ 0.18
PTPN6-212ENST00000539029 MIA2Q96PC5 1412 aa16.18■□□□□ 0.18
PTPN6-212ENST00000539029 MAP3K1Q13233 1512 aa16.16■□□□□ 0.18
PTPN6-212ENST00000539029 SLAIN2Q9P270 581 aa16.16■□□□□ 0.18
PTPN6-212ENST00000539029 SPAG9O60271 1321 aaKnown RBP16.15■□□□□ 0.18
PTPN6-212ENST00000539029 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
PTPN6-212ENST00000539029 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.17
PTPN6-212ENST00000539029 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
PTPN6-212ENST00000539029 PREX2Q70Z35 1606 aa16.13■□□□□ 0.17
PTPN6-212ENST00000539029 NGLY1Q96IV0 654 aa16.13■□□□□ 0.17
PTPN6-212ENST00000539029 SCAF11Q99590 1463 aaKnown RBP16.11■□□□□ 0.17
PTPN6-212ENST00000539029 TROQ12816 1431 aaPredicted RBP16.11■□□□□ 0.17
PTPN6-212ENST00000539029 NWD1Q149M9 1564 aa16.1■□□□□ 0.17
PTPN6-212ENST00000539029 PROSER2Q86WR7 435 aaPredicted RBP16.09■□□□□ 0.17
PTPN6-212ENST00000539029 MSH6P52701 1360 aa16.09■□□□□ 0.17
PTPN6-212ENST00000539029 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
PTPN6-212ENST00000539029 CLIP1P30622 1438 aa16.08■□□□□ 0.16
PTPN6-212ENST00000539029 TIAM1Q13009 1591 aa16.08■□□□□ 0.16
PTPN6-212ENST00000539029 INO80Q9ULG1 1556 aaPredicted RBP16.07■□□□□ 0.16
PTPN6-212ENST00000539029 AHDC1Q5TGY3 1603 aaPredicted RBP16.06■□□□□ 0.16
PTPN6-212ENST00000539029 ADGBQ8N7X0 1667 aa16.05■□□□□ 0.16
PTPN6-212ENST00000539029 PRDM15P57071 1507 aaPredicted RBP16.04■□□□□ 0.16
PTPN6-212ENST00000539029 KCNA6P17658 529 aa16.04■□□□□ 0.16
PTPN6-212ENST00000539029 HRCP23327 699 aa16.04■□□□□ 0.16
PTPN6-212ENST00000539029 ABCC3O15438 1527 aa16.04■□□□□ 0.16
PTPN6-212ENST00000539029 LTKP29376 864 aa16.03■□□□□ 0.16
PTPN6-212ENST00000539029 C8orf37Q96NL8 207 aa16.03■□□□□ 0.16
PTPN6-212ENST00000539029 TXNDC2Q86VQ3 553 aa16.02■□□□□ 0.16
PTPN6-212ENST00000539029 SYCP2Q9BX26 1530 aa16.02■□□□□ 0.15
PTPN6-212ENST00000539029 DIP2AQ14689 1571 aa16.01■□□□□ 0.15
PTPN6-212ENST00000539029 ATP1B4Q9UN42 357 aaPredicted RBP16■□□□□ 0.15
PTPN6-212ENST00000539029 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
PTPN6-212ENST00000539029 WASHC2CQ9Y4E1 1318 aa15.98■□□□□ 0.15
PTPN6-212ENST00000539029 NKTRP30414 1462 aaKnown RBP15.98■□□□□ 0.15
PTPN6-212ENST00000539029 ARHGAP23Q9P227 1491 aa15.98■□□□□ 0.15
PTPN6-212ENST00000539029 UBTFP17480 764 aaKnown RBP15.98■□□□□ 0.15
PTPN6-212ENST00000539029 BLMP54132 1417 aaPredicted RBP15.98■□□□□ 0.15
PTPN6-212ENST00000539029 CDC42BPAQ5VT25 1732 aa15.98■□□□□ 0.15
PTPN6-212ENST00000539029 KDM5AP29375 1690 aaKnown RBP15.98■□□□□ 0.15
PTPN6-212ENST00000539029 SLIT1O75093 1534 aa15.98■□□□□ 0.15
PTPN6-212ENST00000539029 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
PTPN6-212ENST00000539029 HNRNPMP52272 730 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTPN6-212ENST00000539029 DEFB132Q7Z7B7 95 aa15.97■□□□□ 0.15
PTPN6-212ENST00000539029 NCOA2Q15596 1464 aa15.97■□□□□ 0.15
PTPN6-212ENST00000539029 BCL9LQ86UU0 1499 aa15.97■□□□□ 0.15
PTPN6-212ENST00000539029 ZNF777Q9ULD5 760 aaPredicted RBP15.96■□□□□ 0.15
PTPN6-212ENST00000539029 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
PTPN6-212ENST00000539029 C1QTNF8P60827 252 aa15.93■□□□□ 0.14
PTPN6-212ENST00000539029 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
PTPN6-212ENST00000539029 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
PTPN6-212ENST00000539029 KIF3BO15066 747 aa15.92■□□□□ 0.14
PTPN6-212ENST00000539029 DHX29Q7Z478 1369 aaKnown RBP15.9■□□□□ 0.14
PTPN6-212ENST00000539029 KIAA1107Q9UPP5 1409 aa15.9■□□□□ 0.14
PTPN6-212ENST00000539029 SETD5Q9C0A6 1442 aa15.89■□□□□ 0.13
PTPN6-212ENST00000539029 SF3B2Q13435 895 aaKnown RBP15.89■□□□□ 0.13
PTPN6-212ENST00000539029 ZNF784Q8NCA9 323 aaPredicted RBP15.89■□□□□ 0.13
PTPN6-212ENST00000539029 USP21Q9UK80 565 aa15.88■□□□□ 0.13
PTPN6-212ENST00000539029 CEP350Q5VT06 3117 aa15.88■□□□□ 0.13
PTPN6-212ENST00000539029 ERVK-7P63135 1459 aa15.87■□□□□ 0.13
PTPN6-212ENST00000539029 PLEKHH2Q8IVE3 1493 aa15.86■□□□□ 0.13
PTPN6-212ENST00000539029 DCAF8L1A6NGE4 600 aa15.86■□□□□ 0.13
PTPN6-212ENST00000539029 SLC26A8Q96RN1 970 aa15.86■□□□□ 0.13
PTPN6-212ENST00000539029 ATRNO75882 1429 aa15.85■□□□□ 0.13
PTPN6-212ENST00000539029 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms