RNA–Protein interactions for RNA: ENST00000538503.5

KDM2B-209, Transcript of lysine demethylase 2B, humanhuman

TSL 5

Gene KDM2B, Length 6,676 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-209ENST00000538503 FANCD2Q9BXW9 1451 aa16.9■□□□□ 0.3
KDM2B-209ENST00000538503 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
KDM2B-209ENST00000538503 TRIM44Q96DX7 344 aaPredicted RBP16.89■□□□□ 0.29
KDM2B-209ENST00000538503 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
KDM2B-209ENST00000538503 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
KDM2B-209ENST00000538503 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
KDM2B-209ENST00000538503 RASSF8Q8NHQ8 419 aa16.89■□□□□ 0.29
KDM2B-209ENST00000538503 BECN1Q14457 450 aa16.87■□□□□ 0.29
KDM2B-209ENST00000538503 ANO8Q9HCE9 1232 aaPredicted RBP16.87■□□□□ 0.29
KDM2B-209ENST00000538503 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
KDM2B-209ENST00000538503 TOM1L2Q6ZVM7 507 aa16.86■□□□□ 0.29
KDM2B-209ENST00000538503 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
KDM2B-209ENST00000538503 DHX16O60231 1041 aaKnown RBP16.85■□□□□ 0.29
KDM2B-209ENST00000538503 PDE4CQ08493 712 aa16.85■□□□□ 0.29
KDM2B-209ENST00000538503 KIAA1211Q6ZU35 1233 aa16.84■□□□□ 0.29
KDM2B-209ENST00000538503 WWC1Q8IX03 1113 aa16.84■□□□□ 0.29
KDM2B-209ENST00000538503 ABCC8Q09428 1581 aa16.83■□□□□ 0.29
KDM2B-209ENST00000538503 MCCP23508 829 aa16.83■□□□□ 0.28
KDM2B-209ENST00000538503 SLC4A10Q6U841 1118 aa16.83■□□□□ 0.28
KDM2B-209ENST00000538503 BCL11BQ9C0K0 894 aaPredicted RBP16.83■□□□□ 0.28
KDM2B-209ENST00000538503 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
KDM2B-209ENST00000538503 SPDYE4A6NLX3 237 aa16.83■□□□□ 0.28
KDM2B-209ENST00000538503 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
KDM2B-209ENST00000538503 PTMAP06454 111 aaKnown RBP16.81■□□□□ 0.28
KDM2B-209ENST00000538503 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
KDM2B-209ENST00000538503 MIER1Q8N108 512 aa16.81■□□□□ 0.28
KDM2B-209ENST00000538503 CCDC43Q96MW1 224 aaKnown RBP16.81■□□□□ 0.28
KDM2B-209ENST00000538503 WWC2Q6AWC2 1192 aa16.81■□□□□ 0.28
KDM2B-209ENST00000538503 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
KDM2B-209ENST00000538503 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
KDM2B-209ENST00000538503 GOLGA6L22H0YM25 854 aa16.8■□□□□ 0.28
KDM2B-209ENST00000538503 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
KDM2B-209ENST00000538503 NBPF8Q3BBV2 869 aa16.8■□□□□ 0.28
KDM2B-209ENST00000538503 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
KDM2B-209ENST00000538503 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
KDM2B-209ENST00000538503 CLEC11AQ9Y240 323 aa16.79■□□□□ 0.28
KDM2B-209ENST00000538503 CCDC18Q5T9S5 1454 aa16.79■□□□□ 0.28
KDM2B-209ENST00000538503 MYCNP04198 464 aaPredicted RBP16.78■□□□□ 0.28
KDM2B-209ENST00000538503 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
KDM2B-209ENST00000538503 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
KDM2B-209ENST00000538503 HSP90B1P14625 803 aaKnown RBP16.78■□□□□ 0.28
KDM2B-209ENST00000538503 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
KDM2B-209ENST00000538503 GOLGA6L6A8MZA4 724 aa16.77■□□□□ 0.28
KDM2B-209ENST00000538503 IKQ13123 557 aaPredicted RBP16.77■□□□□ 0.28
KDM2B-209ENST00000538503 DNTTIP2Q5QJE6 756 aaKnown RBP16.77■□□□□ 0.28
KDM2B-209ENST00000538503 ARHGAP35Q9NRY4 1499 aa16.77■□□□□ 0.28
KDM2B-209ENST00000538503 BEGAINQ9BUH8 593 aa16.77■□□□□ 0.28
KDM2B-209ENST00000538503 KIF6Q6ZMV9 814 aa16.77■□□□□ 0.27
KDM2B-209ENST00000538503 EIF2S2P20042 333 aaKnown RBP16.77■□□□□ 0.27
KDM2B-209ENST00000538503 FMN1Q68DA7 1419 aa16.76■□□□□ 0.27
KDM2B-209ENST00000538503 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
KDM2B-209ENST00000538503 TMEM132AQ24JP5 1023 aa16.75■□□□□ 0.27
KDM2B-209ENST00000538503 CHAF1AQ13111 956 aaPredicted RBP16.75■□□□□ 0.27
KDM2B-209ENST00000538503 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
KDM2B-209ENST00000538503 PRDM11Q9NQV5 511 aa16.74■□□□□ 0.27
KDM2B-209ENST00000538503 PRDM2Q13029 1718 aa16.74■□□□□ 0.27
KDM2B-209ENST00000538503 POLD1P28340 1107 aa16.73■□□□□ 0.27
KDM2B-209ENST00000538503 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
KDM2B-209ENST00000538503 IPO8O15397 1037 aaKnown RBP16.72■□□□□ 0.27
KDM2B-209ENST00000538503 FYB1O15117 783 aa16.71■□□□□ 0.27
KDM2B-209ENST00000538503 CCDC27Q2M243 656 aa16.71■□□□□ 0.27
KDM2B-209ENST00000538503 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
KDM2B-209ENST00000538503 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.26
KDM2B-209ENST00000538503 R3HCC1Q9Y3T6 440 aaKnown RBP16.71■□□□□ 0.26
KDM2B-209ENST00000538503 TCERG1O14776 1098 aaKnown RBP16.7■□□□□ 0.26
KDM2B-209ENST00000538503 SMC4Q9NTJ3 1288 aa16.7■□□□□ 0.26
KDM2B-209ENST00000538503 AKAP17AQ02040 695 aaKnown RBP16.69■□□□□ 0.26
KDM2B-209ENST00000538503 NLRP6P59044 892 aa16.69■□□□□ 0.26
KDM2B-209ENST00000538503 CEP89Q96ST8 783 aa16.69■□□□□ 0.26
KDM2B-209ENST00000538503 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
KDM2B-209ENST00000538503 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
KDM2B-209ENST00000538503 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
KDM2B-209ENST00000538503 TATP17735 454 aaPredicted RBP16.67■□□□□ 0.26
KDM2B-209ENST00000538503 BICDL1Q6ZP65 573 aa16.67■□□□□ 0.26
KDM2B-209ENST00000538503 WDR70Q9NW82 654 aa16.66■□□□□ 0.26
KDM2B-209ENST00000538503 MAP3K9P80192 1104 aa16.66■□□□□ 0.26
KDM2B-209ENST00000538503 ZNF219Q9P2Y4 722 aaPredicted RBP16.66■□□□□ 0.26
KDM2B-209ENST00000538503 PAF1Q8N7H5 531 aa16.66■□□□□ 0.26
KDM2B-209ENST00000538503 PLIN1O60240 522 aa16.66■□□□□ 0.26
KDM2B-209ENST00000538503 C8orf37Q96NL8 207 aa16.65■□□□□ 0.26
KDM2B-209ENST00000538503 DCAF1Q9Y4B6 1507 aa16.65■□□□□ 0.26
KDM2B-209ENST00000538503 PPM1FP49593 454 aaPredicted RBP16.65■□□□□ 0.26
KDM2B-209ENST00000538503 NAP1L5Q96NT1 182 aaPredicted RBP16.65■□□□□ 0.26
KDM2B-209ENST00000538503 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.26
KDM2B-209ENST00000538503 APPP05067 770 aa16.64■□□□□ 0.25
KDM2B-209ENST00000538503 XPCQ01831 940 aaPredicted RBP16.64■□□□□ 0.25
KDM2B-209ENST00000538503 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
KDM2B-209ENST00000538503 TRIM6-TRIM34B2RNG4 842 aa16.64■□□□□ 0.25
KDM2B-209ENST00000538503 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.252e-7■■■■■ 30.3
KDM2B-209ENST00000538503 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
KDM2B-209ENST00000538503 TNIKQ9UKE5 1360 aa16.63■□□□□ 0.25
KDM2B-209ENST00000538503 PMFBP1Q8TBY8 1022 aa16.63■□□□□ 0.25
KDM2B-209ENST00000538503 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
KDM2B-209ENST00000538503 PRG4Q92954 1404 aaPredicted RBP16.63■□□□□ 0.25
KDM2B-209ENST00000538503 C9orf78Q9NZ63 289 aaPredicted RBP16.63■□□□□ 0.25
KDM2B-209ENST00000538503 SYNE3Q6ZMZ3 975 aa16.63■□□□□ 0.25
KDM2B-209ENST00000538503 SUPT16HQ9Y5B9 1047 aaKnown RBP16.62■□□□□ 0.25
KDM2B-209ENST00000538503 LRRFIP1Q32MZ4 808 aaKnown RBP16.62■□□□□ 0.25
KDM2B-209ENST00000538503 ZPR1O75312 459 aa16.62■□□□□ 0.25
KDM2B-209ENST00000538503 GAPVD1Q14C86 1478 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms