RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
SNHG1-205ENST00000537869 FOSBP53539 338 aa11.8□□□□□ -0.52
SNHG1-205ENST00000537869 FBXW7Q969H0 707 aa11.8□□□□□ -0.52
SNHG1-205ENST00000537869 PLEKHG3A1L390 1219 aa11.79□□□□□ -0.52
SNHG1-205ENST00000537869 HOXB3P14651 431 aaPredicted RBP11.79□□□□□ -0.52
SNHG1-205ENST00000537869 TTLL12Q14166 644 aaPredicted RBP11.79□□□□□ -0.52
SNHG1-205ENST00000537869 ARSIQ5FYB1 569 aa11.79□□□□□ -0.52
SNHG1-205ENST00000537869 NUDT7P0C024 238 aa11.78□□□□□ -0.52
SNHG1-205ENST00000537869 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
SNHG1-205ENST00000537869 REPIN1Q9BWE0 567 aaKnown RBP11.77□□□□□ -0.53
SNHG1-205ENST00000537869 C6orf132Q5T0Z8 1188 aa11.76□□□□□ -0.53
SNHG1-205ENST00000537869 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
SNHG1-205ENST00000537869 DDRGK1Q96HY6 314 aa11.76□□□□□ -0.53
SNHG1-205ENST00000537869 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
SNHG1-205ENST00000537869 PHOX2BQ99453 314 aa11.75□□□□□ -0.53
SNHG1-205ENST00000537869 GPR153Q6NV75 609 aa11.74□□□□□ -0.53
SNHG1-205ENST00000537869 GIGYF2Q6Y7W6 1299 aaKnown RBP11.74□□□□□ -0.53
SNHG1-205ENST00000537869 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
SNHG1-205ENST00000537869 MS4A1P11836 297 aa11.72□□□□□ -0.53
SNHG1-205ENST00000537869 ADAM33Q9BZ11 813 aa11.72□□□□□ -0.53
SNHG1-205ENST00000537869 RIMBP2O15034 1052 aa11.71□□□□□ -0.53
SNHG1-205ENST00000537869 TMUB1Q9BVT8 246 aa11.71□□□□□ -0.53
SNHG1-205ENST00000537869 ZSWIM6Q9HCJ5 1215 aa11.71□□□□□ -0.53
SNHG1-205ENST00000537869 MDM2Q00987 491 aaPredicted RBP11.7□□□□□ -0.54
SNHG1-205ENST00000537869 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
SNHG1-205ENST00000537869 CERKQ8TCT0 537 aa11.7□□□□□ -0.54
SNHG1-205ENST00000537869 SCUBE2Q9NQ36 999 aa11.7□□□□□ -0.54
SNHG1-205ENST00000537869 CLCN1P35523 988 aa11.68□□□□□ -0.54
SNHG1-205ENST00000537869 ZNF710Q8N1W2 664 aa11.68□□□□□ -0.54
SNHG1-205ENST00000537869 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
SNHG1-205ENST00000537869 METTL3Q86U44 580 aaKnown RBP11.67□□□□□ -0.54
SNHG1-205ENST00000537869 GPCPD1Q9NPB8 672 aa11.67□□□□□ -0.54
SNHG1-205ENST00000537869 LHX6Q9UPM6 363 aa11.67□□□□□ -0.54
SNHG1-205ENST00000537869 OATP04181 439 aa11.66□□□□□ -0.54
SNHG1-205ENST00000537869 NLRP7Q8WX94 980 aa11.66□□□□□ -0.54
SNHG1-205ENST00000537869 ADGRG1Q9Y653 693 aa11.66□□□□□ -0.54
SNHG1-205ENST00000537869 TTC13Q8NBP0 860 aa11.65□□□□□ -0.54
SNHG1-205ENST00000537869 SSTR3P32745 418 aaPredicted RBP11.64□□□□□ -0.55
SNHG1-205ENST00000537869 PRSS12P56730 875 aa11.64□□□□□ -0.55
SNHG1-205ENST00000537869 PXYLP1Q8TE99 480 aa11.63□□□□□ -0.55
SNHG1-205ENST00000537869 GOPCQ9HD26 462 aa11.63□□□□□ -0.55
SNHG1-205ENST00000537869 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
SNHG1-205ENST00000537869 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
SNHG1-205ENST00000537869 COL9A1P20849 921 aa11.61□□□□□ -0.55
SNHG1-205ENST00000537869 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
SNHG1-205ENST00000537869 SUPT5HO00267 1087 aaKnown RBP11.59□□□□□ -0.55
SNHG1-205ENST00000537869 FAM217BQ9NTX9 383 aaPredicted RBP11.59□□□□□ -0.55
SNHG1-205ENST00000537869 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
SNHG1-205ENST00000537869 BEGAINQ9BUH8 593 aa11.58□□□□□ -0.56
SNHG1-205ENST00000537869 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
SNHG1-205ENST00000537869 PSDA5PKW4 1024 aaPredicted RBP11.56□□□□□ -0.56
SNHG1-205ENST00000537869 RBM46Q8TBY0 533 aaKnown RBP11.56□□□□□ -0.56
SNHG1-205ENST00000537869 PCMTD1Q96MG8 357 aaPredicted RBP11.56□□□□□ -0.56
SNHG1-205ENST00000537869 SNPHO15079 494 aa11.55□□□□□ -0.56
SNHG1-205ENST00000537869 HOXB1P14653 301 aaPredicted RBP11.55□□□□□ -0.56
SNHG1-205ENST00000537869 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
SNHG1-205ENST00000537869 ZMYND15Q9H091 742 aa11.54□□□□□ -0.56
SNHG1-205ENST00000537869 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
SNHG1-205ENST00000537869 PTPREP23469 700 aa11.53□□□□□ -0.56
SNHG1-205ENST00000537869 PPP1R3GB7ZBB8 358 aa11.52□□□□□ -0.57
SNHG1-205ENST00000537869 C3orf80F5H4A9 247 aa11.52□□□□□ -0.57
SNHG1-205ENST00000537869 SKIV2LQ15477 1246 aaKnown RBP11.52□□□□□ -0.57
SNHG1-205ENST00000537869 EYA1Q99502 592 aa11.52□□□□□ -0.57
SNHG1-205ENST00000537869 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
SNHG1-205ENST00000537869 RCCD1A6NED2 376 aa11.51□□□□□ -0.57
SNHG1-205ENST00000537869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.49□□□□□ -0.57
SNHG1-205ENST00000537869 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
SNHG1-205ENST00000537869 PROCA1Q8NCQ7 364 aaPredicted RBP11.49□□□□□ -0.57
SNHG1-205ENST00000537869 POLR3EQ9NVU0 708 aa11.49□□□□□ -0.57
SNHG1-205ENST00000537869 OTUD5Q96G74 571 aa11.48□□□□□ -0.57
SNHG1-205ENST00000537869 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
SNHG1-205ENST00000537869 TATDN2Q93075 761 aa11.47□□□□□ -0.57
SNHG1-205ENST00000537869 ONECUT3O60422 494 aaPredicted RBP11.46□□□□□ -0.57
SNHG1-205ENST00000537869 FLIIQ13045 1269 aa11.46□□□□□ -0.57
SNHG1-205ENST00000537869 MYSM1Q5VVJ2 828 aa11.46□□□□□ -0.57
SNHG1-205ENST00000537869 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
SNHG1-205ENST00000537869 ATP1B4Q9UN42 357 aaPredicted RBP11.46□□□□□ -0.57
SNHG1-205ENST00000537869 PROX2Q3B8N5 592 aa11.45□□□□□ -0.58
SNHG1-205ENST00000537869 PACS2Q86VP3 889 aa11.45□□□□□ -0.58
SNHG1-205ENST00000537869 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
SNHG1-205ENST00000537869 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
SNHG1-205ENST00000537869 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
SNHG1-205ENST00000537869 SMAPO00193 183 aa11.43□□□□□ -0.58
SNHG1-205ENST00000537869 ARXQ96QS3 562 aa11.43□□□□□ -0.58
SNHG1-205ENST00000537869 DNAJB2P25686 324 aa11.42□□□□□ -0.58
SNHG1-205ENST00000537869 CD46P15529 392 aa11.41□□□□□ -0.58
SNHG1-205ENST00000537869 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.58
SNHG1-205ENST00000537869 DDX11L8A8MPP1 907 aa11.4□□□□□ -0.58
SNHG1-205ENST00000537869 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
SNHG1-205ENST00000537869 TMEM134Q9H6X4 195 aa11.4□□□□□ -0.58
SNHG1-205ENST00000537869 CLK2P49760 499 aaKnown RBP11.39□□□□□ -0.59
SNHG1-205ENST00000537869 DIXDC1Q155Q3 683 aa11.39□□□□□ -0.59
SNHG1-205ENST00000537869 PSEN2P49810 448 aa11.38□□□□□ -0.59
SNHG1-205ENST00000537869 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
SNHG1-205ENST00000537869 ZBED2Q9BTP6 218 aa11.38□□□□□ -0.59
SNHG1-205ENST00000537869 KIAA1468Q9P260 1216 aa11.38□□□□□ -0.59
SNHG1-205ENST00000537869 KCNH8Q96L42 1107 aa11.37□□□□□ -0.59
SNHG1-205ENST00000537869 LIMD1Q9UGP4 676 aa11.37□□□□□ -0.59
SNHG1-205ENST00000537869 ERBB3P21860 1342 aa11.35□□□□□ -0.59
SNHG1-205ENST00000537869 FBXO31Q5XUX0 539 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms