RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 GPR153Q6NV75 609 aa7.78□□□□□ -1.16
SNHG1-203ENST00000537024 MICALL2Q8IY33 904 aa7.78□□□□□ -1.16
SNHG1-203ENST00000537024 ZSWIM6Q9HCJ5 1215 aa7.78□□□□□ -1.16
SNHG1-203ENST00000537024 ARIH1Q9Y4X5 557 aaPredicted RBP7.78□□□□□ -1.16
SNHG1-203ENST00000537024 ERCC6L2Q5T890 1561 aa7.77□□□□□ -1.17
SNHG1-203ENST00000537024 CAMK2BQ13554 666 aa7.77□□□□□ -1.17
SNHG1-203ENST00000537024 URB2Q14146 1524 aaKnown RBP7.77□□□□□ -1.17
SNHG1-203ENST00000537024 ZNF608Q9ULD9 1512 aaPredicted RBP7.77□□□□□ -1.17
SNHG1-203ENST00000537024 FANCD2Q9BXW9 1451 aa7.76□□□□□ -1.17
SNHG1-203ENST00000537024 PPP1R15BQ5SWA1 713 aa7.75□□□□□ -1.17
SNHG1-203ENST00000537024 ERICH6Q7L0X2 663 aa7.75□□□□□ -1.17
SNHG1-203ENST00000537024 BRPF1P55201 1214 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-203ENST00000537024 SLC24A3Q9HC58 644 aa7.74□□□□□ -1.17
SNHG1-203ENST00000537024 GPHNQ9NQX3 736 aaPredicted RBP7.74□□□□□ -1.17
SNHG1-203ENST00000537024 TIMELESSQ9UNS1 1208 aa7.74□□□□□ -1.17
SNHG1-203ENST00000537024 LMTK3Q96Q04 1460 aa7.74□□□□□ -1.17
SNHG1-203ENST00000537024 EIF4G3O43432 1585 aaKnown RBP7.73□□□□□ -1.17
SNHG1-203ENST00000537024 KDM4FA0A1W2PPD8 638 aa7.73□□□□□ -1.17
SNHG1-203ENST00000537024 NEUROD2Q15784 382 aa7.73□□□□□ -1.17
SNHG1-203ENST00000537024 IFT140Q96RY7 1462 aa7.71□□□□□ -1.18
SNHG1-203ENST00000537024 ZMYND10O75800 440 aa7.71□□□□□ -1.18
SNHG1-203ENST00000537024 PTGER2P43116 358 aa7.71□□□□□ -1.18
SNHG1-203ENST00000537024 ARSIQ5FYB1 569 aa7.71□□□□□ -1.18
SNHG1-203ENST00000537024 CLASP1Q7Z460 1538 aa7.7□□□□□ -1.18
SNHG1-203ENST00000537024 TMC2Q8TDI7 906 aa7.7□□□□□ -1.18
SNHG1-203ENST00000537024 FBXO41Q8TF61 875 aa7.7□□□□□ -1.18
SNHG1-203ENST00000537024 HECW2Q9P2P5 1572 aa7.7□□□□□ -1.18
SNHG1-203ENST00000537024 ANKRD13DQ6ZTN6 518 aa7.69□□□□□ -1.18
SNHG1-203ENST00000537024 KIF13AQ9H1H9 1805 aa7.68□□□□□ -1.18
SNHG1-203ENST00000537024 SOCS7O14512 581 aa7.68□□□□□ -1.18
SNHG1-203ENST00000537024 MLLT3P42568 568 aaPredicted RBP7.68□□□□□ -1.18
SNHG1-203ENST00000537024 GPIHBP1Q8IV16 184 aa7.68□□□□□ -1.18
SNHG1-203ENST00000537024 SPDYE16A6NNV3 312 aaPredicted RBP7.67□□□□□ -1.18
SNHG1-203ENST00000537024 DPYSL4O14531 572 aa7.67□□□□□ -1.18
SNHG1-203ENST00000537024 DSG2Q14126 1118 aa7.67□□□□□ -1.18
SNHG1-203ENST00000537024 RBM26Q5T8P6 1007 aaKnown RBP7.67□□□□□ -1.18
SNHG1-203ENST00000537024 BARGINQ6ZT62 677 aa7.67□□□□□ -1.18
SNHG1-203ENST00000537024 KHSRPQ92945 711 aaKnown RBP eCLIP7.67□□□□□ -1.182e-12■■□□□ 11.6
SNHG1-203ENST00000537024 ZNF316A6NFI3 1004 aaPredicted RBP7.66□□□□□ -1.18
SNHG1-203ENST00000537024 EMILIN3Q9NT22 766 aa7.66□□□□□ -1.18
SNHG1-203ENST00000537024 FOXK1P85037 733 aa7.65□□□□□ -1.18
SNHG1-203ENST00000537024 KRI1Q8N9T8 703 aaKnown RBP7.65□□□□□ -1.18
SNHG1-203ENST00000537024 LSM11P83369 360 aaKnown RBP eCLIP7.64□□□□□ -1.19
SNHG1-203ENST00000537024 PDIA6Q15084 440 aa7.64□□□□□ -1.19
SNHG1-203ENST00000537024 AK7Q96M32 723 aa7.64□□□□□ -1.19
SNHG1-203ENST00000537024 CFTRP13569 1480 aa7.63□□□□□ -1.19
SNHG1-203ENST00000537024 C14orf37Q86TY3 774 aa7.63□□□□□ -1.19
SNHG1-203ENST00000537024 ILDR2Q71H61 639 aa7.62□□□□□ -1.19
SNHG1-203ENST00000537024 PLPP6Q8IY26 295 aa7.62□□□□□ -1.19
SNHG1-203ENST00000537024 GAPVD1Q14C86 1478 aa7.62□□□□□ -1.19
SNHG1-203ENST00000537024 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
SNHG1-203ENST00000537024 MROH2BQ7Z745 1585 aa7.6□□□□□ -1.19
SNHG1-203ENST00000537024 C2orf72A6NCS6 295 aa7.6□□□□□ -1.19
SNHG1-203ENST00000537024 POTEEQ6S8J3 1075 aa7.6□□□□□ -1.19
SNHG1-203ENST00000537024 MAP3K9P80192 1104 aa7.59□□□□□ -1.19
SNHG1-203ENST00000537024 DAXXQ9UER7 740 aaPredicted RBP7.59□□□□□ -1.19
SNHG1-203ENST00000537024 KDM6BO15054 1643 aa7.58□□□□□ -1.2
SNHG1-203ENST00000537024 PRDM2Q13029 1718 aa7.58□□□□□ -1.2
SNHG1-203ENST00000537024 ADGRL1O94910 1474 aa7.57□□□□□ -1.2
SNHG1-203ENST00000537024 TARBP1Q13395 1621 aaKnown RBP7.57□□□□□ -1.2
SNHG1-203ENST00000537024 GRXCR2A6NFK2 248 aa7.57□□□□□ -1.2
SNHG1-203ENST00000537024 KIF3CO14782 793 aa7.57□□□□□ -1.2
SNHG1-203ENST00000537024 PBX2P40425 430 aa7.57□□□□□ -1.2
SNHG1-203ENST00000537024 AQRO60306 1485 aaKnown RBP eCLIP7.56□□□□□ -1.23e-14■■■■■ 50.7
SNHG1-203ENST00000537024 NUDT7P0C024 238 aa7.56□□□□□ -1.2
SNHG1-203ENST00000537024 PLA2G2EQ9NZK7 142 aa7.56□□□□□ -1.2
SNHG1-203ENST00000537024 AXIN2Q9Y2T1 843 aa7.56□□□□□ -1.2
SNHG1-203ENST00000537024 TOPBP1Q92547 1522 aa7.56□□□□□ -1.2
SNHG1-203ENST00000537024 SYNJ2O15056 1496 aa7.55□□□□□ -1.2
SNHG1-203ENST00000537024 UPF1Q92900 1129 aaKnown RBP eCLIP7.55□□□□□ -1.2
SNHG1-203ENST00000537024 GPBP1L1Q9HC44 474 aaPredicted RBP7.55□□□□□ -1.2
SNHG1-203ENST00000537024 NUTM2FA1L443 756 aa7.54□□□□□ -1.2
SNHG1-203ENST00000537024 TRIM66O15016 1216 aa7.54□□□□□ -1.2
SNHG1-203ENST00000537024 LHX6Q9UPM6 363 aa7.54□□□□□ -1.2
SNHG1-203ENST00000537024 PDE4DQ08499 809 aa7.53□□□□□ -1.2
SNHG1-203ENST00000537024 HCSTQ9UBK5 93 aa7.53□□□□□ -1.2
SNHG1-203ENST00000537024 SNAPC4Q5SXM2 1469 aa7.52□□□□□ -1.21
SNHG1-203ENST00000537024 DISP3Q9P2K9 1392 aa7.52□□□□□ -1.21
SNHG1-203ENST00000537024 TBC1D12O60347 775 aa7.52□□□□□ -1.21
SNHG1-203ENST00000537024 SLC34A2O95436 690 aa7.52□□□□□ -1.21
SNHG1-203ENST00000537024 KDM4CQ9H3R0 1056 aa7.52□□□□□ -1.21
SNHG1-203ENST00000537024 PCDHGA4Q9Y5G9 962 aa7.52□□□□□ -1.21
SNHG1-203ENST00000537024 GPR37O15354 613 aa7.51□□□□□ -1.21
SNHG1-203ENST00000537024 IL27Q8NEV9 243 aa7.51□□□□□ -1.21
SNHG1-203ENST00000537024 MINK1Q8N4C8 1332 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-203ENST00000537024 OXER1Q8TDS5 423 aa7.5□□□□□ -1.21
SNHG1-203ENST00000537024 DIP2BQ9P265 1576 aa7.5□□□□□ -1.21
SNHG1-203ENST00000537024 ABCC10Q5T3U5 1492 aa7.49□□□□□ -1.21
SNHG1-203ENST00000537024 OSBPP22059 807 aa7.49□□□□□ -1.21
SNHG1-203ENST00000537024 ADGRD1Q6QNK2 874 aa7.49□□□□□ -1.21
SNHG1-203ENST00000537024 DDX12PQ92771 950 aa7.49□□□□□ -1.21
SNHG1-203ENST00000537024 DNMBPQ6XZF7 1577 aa7.49□□□□□ -1.21
SNHG1-203ENST00000537024 SPATA31D1Q6ZQQ2 1576 aa7.49□□□□□ -1.21
SNHG1-203ENST00000537024 WIZO95785 1651 aa7.48□□□□□ -1.21
SNHG1-203ENST00000537024 FCHSD2O94868 740 aa7.48□□□□□ -1.21
SNHG1-203ENST00000537024 MAP2K5Q13163 448 aa7.48□□□□□ -1.21
SNHG1-203ENST00000537024 MAGI1Q96QZ7 1491 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-203ENST00000537024 ARHGAP33O14559 1287 aa7.47□□□□□ -1.21
SNHG1-203ENST00000537024 GNPATO15228 680 aa7.47□□□□□ -1.21
SNHG1-203ENST00000537024 EVI5O60447 810 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms