RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ADGRD1Q6QNK2 874 aa10.11□□□□□ -0.79
ITGB1-219ENST00000534049 PPP1R3GB7ZBB8 358 aa10.1□□□□□ -0.79
ITGB1-219ENST00000534049 NBR1Q14596 966 aa10.1□□□□□ -0.79
ITGB1-219ENST00000534049 MYT1LQ9UL68 1186 aa10.09□□□□□ -0.79
ITGB1-219ENST00000534049 EN1Q05925 392 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-219ENST00000534049 DMRTA1Q5VZB9 504 aa10.08□□□□□ -0.8
ITGB1-219ENST00000534049 STAC3Q96MF2 364 aa10.07□□□□□ -0.8
ITGB1-219ENST00000534049 GRXCR2A6NFK2 248 aa10.06□□□□□ -0.8
ITGB1-219ENST00000534049 MAP3K7O43318 606 aa10.06□□□□□ -0.8
ITGB1-219ENST00000534049 C6orf132Q5T0Z8 1188 aa10.06□□□□□ -0.8
ITGB1-219ENST00000534049 CERKQ8TCT0 537 aa10.05□□□□□ -0.8
ITGB1-219ENST00000534049 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
ITGB1-219ENST00000534049 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
ITGB1-219ENST00000534049 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-219ENST00000534049 HRO43593 1189 aa10.03□□□□□ -0.8
ITGB1-219ENST00000534049 ONECUT3O60422 494 aaPredicted RBP10.03□□□□□ -0.8
ITGB1-219ENST00000534049 RBM33Q96EV2 1170 aaKnown RBP10.03□□□□□ -0.8
ITGB1-219ENST00000534049 NBPF3Q9H094 633 aa10.03□□□□□ -0.8
ITGB1-219ENST00000534049 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
ITGB1-219ENST00000534049 OSBPP22059 807 aa10□□□□□ -0.81
ITGB1-219ENST00000534049 RABGEF1Q9UJ41 708 aa10□□□□□ -0.81
ITGB1-219ENST00000534049 SMYD5Q6GMV2 418 aa9.99□□□□□ -0.81
ITGB1-219ENST00000534049 COL9A1P20849 921 aa9.98□□□□□ -0.81
ITGB1-219ENST00000534049 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
ITGB1-219ENST00000534049 TSR1Q2NL82 804 aaKnown RBP9.96□□□□□ -0.82
ITGB1-219ENST00000534049 MRPL50Q8N5N7 158 aaKnown RBP9.96□□□□□ -0.82
ITGB1-219ENST00000534049 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
ITGB1-219ENST00000534049 TRIM6-TRIM34B2RNG4 842 aa9.95□□□□□ -0.82
ITGB1-219ENST00000534049 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
ITGB1-219ENST00000534049 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
ITGB1-219ENST00000534049 MLLT3P42568 568 aaPredicted RBP9.94□□□□□ -0.82
ITGB1-219ENST00000534049 PACS2Q86VP3 889 aa9.94□□□□□ -0.82
ITGB1-219ENST00000534049 SEMA3EO15041 775 aa9.93□□□□□ -0.82
ITGB1-219ENST00000534049 PROX2Q3B8N5 592 aa9.93□□□□□ -0.82
ITGB1-219ENST00000534049 TESPA1A2RU30 521 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-219ENST00000534049 TULP1O00294 542 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-219ENST00000534049 PRSS12P56730 875 aa9.92□□□□□ -0.82
ITGB1-219ENST00000534049 PRIM1P49642 420 aaKnown RBP9.91□□□□□ -0.82
ITGB1-219ENST00000534049 KIAA1468Q9P260 1216 aa9.91□□□□□ -0.82
ITGB1-219ENST00000534049 HCSTQ9UBK5 93 aa9.91□□□□□ -0.82
ITGB1-219ENST00000534049 CDCA7LQ96GN5 454 aa9.9□□□□□ -0.82
ITGB1-219ENST00000534049 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
ITGB1-219ENST00000534049 CDHR5Q9HBB8 845 aa9.88□□□□□ -0.83
ITGB1-219ENST00000534049 FAM98CQ17RN3 349 aaKnown RBP9.87□□□□□ -0.83
ITGB1-219ENST00000534049 ANKK1Q8NFD2 765 aa9.87□□□□□ -0.83
ITGB1-219ENST00000534049 WNT2BQ93097 391 aa9.87□□□□□ -0.83
ITGB1-219ENST00000534049 KCTD12Q96CX2 325 aaKnown RBP9.87□□□□□ -0.83
ITGB1-219ENST00000534049 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
ITGB1-219ENST00000534049 NUTM2FA1L443 756 aa9.85□□□□□ -0.83
ITGB1-219ENST00000534049 FCHSD2O94868 740 aa9.84□□□□□ -0.83
ITGB1-219ENST00000534049 PTGDRQ13258 359 aa9.84□□□□□ -0.83
ITGB1-219ENST00000534049 NPDC1Q9NQX5 325 aaPredicted RBP9.84□□□□□ -0.83
ITGB1-219ENST00000534049 THSD4Q6ZMP0 1018 aa9.83□□□□□ -0.84
ITGB1-219ENST00000534049 TTC13Q8NBP0 860 aa9.83□□□□□ -0.84
ITGB1-219ENST00000534049 ZFRQ96KR1 1074 aaKnown RBP9.83□□□□□ -0.84
ITGB1-219ENST00000534049 TATDN2Q93075 761 aa9.81□□□□□ -0.84
ITGB1-219ENST00000534049 SEPT9Q9UHD8 586 aaPredicted RBP9.81□□□□□ -0.84
ITGB1-219ENST00000534049 HIC1Q14526 733 aa9.8□□□□□ -0.84
ITGB1-219ENST00000534049 PADI6Q6TGC4 694 aa9.8□□□□□ -0.84
ITGB1-219ENST00000534049 NYAP1Q6ZVC0 841 aa9.8□□□□□ -0.84
ITGB1-219ENST00000534049 SOWAHBA6NEL2 793 aa9.79□□□□□ -0.84
ITGB1-219ENST00000534049 HDGFP51858 240 aaKnown RBP9.79□□□□□ -0.84
ITGB1-219ENST00000534049 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
ITGB1-219ENST00000534049 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
ITGB1-219ENST00000534049 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
ITGB1-219ENST00000534049 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
ITGB1-219ENST00000534049 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.85
ITGB1-219ENST00000534049 NUDT18Q6ZVK8 323 aa9.77□□□□□ -0.85
ITGB1-219ENST00000534049 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
ITGB1-219ENST00000534049 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.77□□□□□ -0.85
ITGB1-219ENST00000534049 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
ITGB1-219ENST00000534049 PTPN5P54829 565 aa9.75□□□□□ -0.85
ITGB1-219ENST00000534049 GPIHBP1Q8IV16 184 aa9.75□□□□□ -0.85
ITGB1-219ENST00000534049 GNPATO15228 680 aa9.74□□□□□ -0.85
ITGB1-219ENST00000534049 TSR3Q9UJK0 312 aaKnown RBP9.73□□□□□ -0.85
ITGB1-219ENST00000534049 SMAPO00193 183 aa9.72□□□□□ -0.85
ITGB1-219ENST00000534049 OATP04181 439 aa9.72□□□□□ -0.85
ITGB1-219ENST00000534049 BCAMP50895 628 aa9.72□□□□□ -0.85
ITGB1-219ENST00000534049 SLC24A1O60721 1099 aa9.71□□□□□ -0.86
ITGB1-219ENST00000534049 EYA1Q99502 592 aa9.71□□□□□ -0.86
ITGB1-219ENST00000534049 ADGRG1Q9Y653 693 aa9.71□□□□□ -0.86
ITGB1-219ENST00000534049 DNAJB2P25686 324 aa9.7□□□□□ -0.86
ITGB1-219ENST00000534049 SAMD7Q7Z3H4 446 aa9.7□□□□□ -0.86
ITGB1-219ENST00000534049 SLF2Q8IX21 1173 aa9.7□□□□□ -0.86
ITGB1-219ENST00000534049 GPR37O15354 613 aa9.69□□□□□ -0.86
ITGB1-219ENST00000534049 HPS5Q9UPZ3 1129 aa9.69□□□□□ -0.86
ITGB1-219ENST00000534049 PPP4CP60510 307 aa9.68□□□□□ -0.86
ITGB1-219ENST00000534049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.67□□□□□ -0.86
ITGB1-219ENST00000534049 C3orf80F5H4A9 247 aa9.67□□□□□ -0.86
ITGB1-219ENST00000534049 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
ITGB1-219ENST00000534049 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
ITGB1-219ENST00000534049 IFFO2Q5TF58 517 aa9.65□□□□□ -0.86
ITGB1-219ENST00000534049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
ITGB1-219ENST00000534049 PRR14Q9BWN1 585 aa9.65□□□□□ -0.86
ITGB1-219ENST00000534049 SWT1Q5T5J6 900 aaKnown RBP9.64□□□□□ -0.87
ITGB1-219ENST00000534049 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
ITGB1-219ENST00000534049 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
ITGB1-219ENST00000534049 RCCD1A6NED2 376 aa9.63□□□□□ -0.87
ITGB1-219ENST00000534049 RNF40O75150 1001 aa9.63□□□□□ -0.87
ITGB1-219ENST00000534049 METTL3Q86U44 580 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms