RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 U2AF1L5P0DN76 240 aaPredicted RBP14.47□□□□□ -0.09
AMBRA1-211ENST00000533727 U2AF1Q01081 240 aaKnown RBP eCLIP14.47□□□□□ -0.09
AMBRA1-211ENST00000533727 OS9Q13438 667 aaPredicted RBP14.46□□□□□ -0.09
AMBRA1-211ENST00000533727 TRIM44Q96DX7 344 aaPredicted RBP14.45□□□□□ -0.1
AMBRA1-211ENST00000533727 COG3Q96JB2 828 aa14.45□□□□□ -0.1
AMBRA1-211ENST00000533727 SLC52A1Q9NWF4 448 aa14.45□□□□□ -0.1
AMBRA1-211ENST00000533727 SCAPERQ9BY12 1400 aa14.45□□□□□ -0.1
AMBRA1-211ENST00000533727 CCER2I3L3R5 266 aa14.45□□□□□ -0.1
AMBRA1-211ENST00000533727 MEX3CQ5U5Q3 659 aaKnown RBP14.45□□□□□ -0.1
AMBRA1-211ENST00000533727 RRBP1Q9P2E9 1410 aaKnown RBP14.45□□□□□ -0.1
AMBRA1-211ENST00000533727 CD109Q6YHK3 1445 aa14.44□□□□□ -0.1
AMBRA1-211ENST00000533727 EVA1CP58658 441 aa14.44□□□□□ -0.1
AMBRA1-211ENST00000533727 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
AMBRA1-211ENST00000533727 IPO8O15397 1037 aaKnown RBP14.44□□□□□ -0.1
AMBRA1-211ENST00000533727 ZNF644Q9H582 1327 aaPredicted RBP14.43□□□□□ -0.1
AMBRA1-211ENST00000533727 PSME1Q06323 249 aa14.42□□□□□ -0.1
AMBRA1-211ENST00000533727 CGNL1Q0VF96 1302 aa14.42□□□□□ -0.1
AMBRA1-211ENST00000533727 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
AMBRA1-211ENST00000533727 HFM1A2PYH4 1435 aa14.41□□□□□ -0.1
AMBRA1-211ENST00000533727 TXNDC2Q86VQ3 553 aa14.41□□□□□ -0.1
AMBRA1-211ENST00000533727 C9orf84Q5VXU9 1444 aa14.41□□□□□ -0.1
AMBRA1-211ENST00000533727 PLB1Q6P1J6 1458 aa14.4□□□□□ -0.1
AMBRA1-211ENST00000533727 ANKLE2Q86XL3 938 aa14.4□□□□□ -0.1
AMBRA1-211ENST00000533727 STK31Q9BXU1 1019 aa14.4□□□□□ -0.1
AMBRA1-211ENST00000533727 NUTM2FA1L443 756 aa14.39□□□□□ -0.11
AMBRA1-211ENST00000533727 FRAT1Q92837 279 aaPredicted RBP14.39□□□□□ -0.11
AMBRA1-211ENST00000533727 MINK1Q8N4C8 1332 aaPredicted RBP14.39□□□□□ -0.11
AMBRA1-211ENST00000533727 ARAP1Q96P48 1450 aa14.39□□□□□ -0.11
AMBRA1-211ENST00000533727 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
AMBRA1-211ENST00000533727 CENPJQ9HC77 1338 aaPredicted RBP14.38□□□□□ -0.11
AMBRA1-211ENST00000533727 BECN1Q14457 450 aa14.38□□□□□ -0.11
AMBRA1-211ENST00000533727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.112e-7■■■□□ 18.3
AMBRA1-211ENST00000533727 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
AMBRA1-211ENST00000533727 NLRP13Q86W25 1043 aa14.37□□□□□ -0.11
AMBRA1-211ENST00000533727 PPP6R1Q9UPN7 881 aa14.37□□□□□ -0.11
AMBRA1-211ENST00000533727 EPRSP07814 1512 aaKnown RBP14.36□□□□□ -0.11
AMBRA1-211ENST00000533727 C1orf141Q5JVX7 400 aa14.36□□□□□ -0.11
AMBRA1-211ENST00000533727 RPGRIP1LQ68CZ1 1315 aa14.36□□□□□ -0.11
AMBRA1-211ENST00000533727 GPRASP1Q5JY77 1395 aa14.35□□□□□ -0.11
AMBRA1-211ENST00000533727 NAP1L5Q96NT1 182 aaPredicted RBP14.35□□□□□ -0.11
AMBRA1-211ENST00000533727 NOP58Q9Y2X3 529 aaKnown RBP14.35□□□□□ -0.11
AMBRA1-211ENST00000533727 SUPT16HQ9Y5B9 1047 aaKnown RBP14.35□□□□□ -0.11
AMBRA1-211ENST00000533727 TEX14Q8IWB6 1497 aa14.35□□□□□ -0.11
AMBRA1-211ENST00000533727 RAPGEF3O95398 923 aa14.35□□□□□ -0.11
AMBRA1-211ENST00000533727 ZNF608Q9ULD9 1512 aaPredicted RBP14.34□□□□□ -0.11
AMBRA1-211ENST00000533727 AKNAQ7Z591 1439 aa14.34□□□□□ -0.11
AMBRA1-211ENST00000533727 ST20-MTHFSA0A0A6YYL1 179 aa14.34□□□□□ -0.11
AMBRA1-211ENST00000533727 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
AMBRA1-211ENST00000533727 LTV1Q96GA3 475 aaPredicted RBP14.33□□□□□ -0.12
AMBRA1-211ENST00000533727 DEKP35659 375 aaKnown RBP14.32□□□□□ -0.12
AMBRA1-211ENST00000533727 KIF14Q15058 1648 aa14.32□□□□□ -0.12
AMBRA1-211ENST00000533727 ZNF330Q9Y3S2 320 aaPredicted RBP14.32□□□□□ -0.12
AMBRA1-211ENST00000533727 CCDC141Q6ZP82 1450 aa14.32□□□□□ -0.12
AMBRA1-211ENST00000533727 USP47Q96K76 1375 aa14.31□□□□□ -0.12
AMBRA1-211ENST00000533727 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
AMBRA1-211ENST00000533727 DENND4BO75064 1496 aaPredicted RBP14.31□□□□□ -0.12
AMBRA1-211ENST00000533727 ADGRL1O94910 1474 aa14.31□□□□□ -0.12
AMBRA1-211ENST00000533727 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
AMBRA1-211ENST00000533727 GOLGA6L22H0YM25 854 aa14.29□□□□□ -0.12
AMBRA1-211ENST00000533727 TIAM1Q13009 1591 aa14.29□□□□□ -0.12
AMBRA1-211ENST00000533727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.12
AMBRA1-211ENST00000533727 NGEFQ8N5V2 710 aa14.28□□□□□ -0.12
AMBRA1-211ENST00000533727 HMGB2P26583 209 aaKnown RBP14.27□□□□□ -0.12
AMBRA1-211ENST00000533727 GTF2E1P29083 439 aaPredicted RBP14.27□□□□□ -0.12
AMBRA1-211ENST00000533727 TEFQ10587 303 aa14.27□□□□□ -0.12
AMBRA1-211ENST00000533727 PPP4R2Q9NY27 417 aa14.27□□□□□ -0.12
AMBRA1-211ENST00000533727 ANKRD30BQ9BXX2 1392 aa14.27□□□□□ -0.12
AMBRA1-211ENST00000533727 NCLP19338 710 aaKnown RBP14.27□□□□□ -0.12
AMBRA1-211ENST00000533727 PANK3Q9H999 370 aa14.26□□□□□ -0.13
AMBRA1-211ENST00000533727 KCNJ4P48050 445 aa14.26□□□□□ -0.13
AMBRA1-211ENST00000533727 TTC5Q8N0Z6 440 aa14.26□□□□□ -0.13
AMBRA1-211ENST00000533727 TAF7LQ5H9L4 462 aa14.26□□□□□ -0.13
AMBRA1-211ENST00000533727 MYBBP1AQ9BQG0 1328 aaKnown RBP14.25□□□□□ -0.13
AMBRA1-211ENST00000533727 DAPK1P53355 1430 aa14.25□□□□□ -0.13
AMBRA1-211ENST00000533727 ROCK1Q13464 1354 aa14.25□□□□□ -0.13
AMBRA1-211ENST00000533727 PDE3BQ13370 1112 aa14.25□□□□□ -0.13
AMBRA1-211ENST00000533727 RAPGEF4Q8WZA2 1011 aa14.25□□□□□ -0.13
AMBRA1-211ENST00000533727 FGD1P98174 961 aa14.24□□□□□ -0.13
AMBRA1-211ENST00000533727 KIAA1107Q9UPP5 1409 aa14.24□□□□□ -0.13
AMBRA1-211ENST00000533727 G3V3G9 751 aa14.24□□□□□ -0.13
AMBRA1-211ENST00000533727 HMMRO75330 724 aa14.24□□□□□ -0.13
AMBRA1-211ENST00000533727 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
AMBRA1-211ENST00000533727 CDK13Q14004 1512 aaKnown RBP14.24□□□□□ -0.13
AMBRA1-211ENST00000533727 CDK11BP21127 795 aaKnown RBP14.24□□□□□ -0.13
AMBRA1-211ENST00000533727 ARHGEF11O15085 1522 aa14.23□□□□□ -0.13
AMBRA1-211ENST00000533727 RBM19Q9Y4C8 960 aaKnown RBP14.23□□□□□ -0.13
AMBRA1-211ENST00000533727 DIAPH1O60610 1272 aaKnown RBP14.22□□□□□ -0.13
AMBRA1-211ENST00000533727 MCCP23508 829 aa14.22□□□□□ -0.13
AMBRA1-211ENST00000533727 WASHC2AQ641Q2 1341 aa14.21□□□□□ -0.13
AMBRA1-211ENST00000533727 PTMAP06454 111 aaKnown RBP14.21□□□□□ -0.13
AMBRA1-211ENST00000533727 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-211ENST00000533727 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
AMBRA1-211ENST00000533727 FANCAO15360 1455 aa14.21□□□□□ -0.14
AMBRA1-211ENST00000533727 ESCO1Q5FWF5 840 aa14.21□□□□□ -0.14
AMBRA1-211ENST00000533727 DNTTIP2Q5QJE6 756 aaKnown RBP14.21□□□□□ -0.14
AMBRA1-211ENST00000533727 MAP3K1Q13233 1512 aa14.2□□□□□ -0.14
AMBRA1-211ENST00000533727 GORABQ5T7V8 394 aa14.2□□□□□ -0.14
AMBRA1-211ENST00000533727 NLRP6P59044 892 aa14.19□□□□□ -0.14
AMBRA1-211ENST00000533727 PHF23Q9BUL5 403 aaPredicted RBP14.19□□□□□ -0.14
AMBRA1-211ENST00000533727 WDR62O43379 1518 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms