RNA–Protein interactions for RNA: ENST00000532996.5

ARHGAP28-207, Transcript of Rho GTPase activating protein 28, humanhuman

TSL 1 (best) BASIC

Gene ARHGAP28, Length 1,859 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-207ENST00000532996 MAMSTRQ6ZN01 415 aa9.36□□□□□ -0.91
ARHGAP28-207ENST00000532996 ZNF454Q8N9F8 522 aa9.36□□□□□ -0.91
ARHGAP28-207ENST00000532996 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
ARHGAP28-207ENST00000532996 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
ARHGAP28-207ENST00000532996 AMHR2Q16671 573 aa9.35□□□□□ -0.91
ARHGAP28-207ENST00000532996 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
ARHGAP28-207ENST00000532996 PARP9Q8IXQ6 854 aa9.34□□□□□ -0.91
ARHGAP28-207ENST00000532996 ZDHHC16Q969W1 377 aa9.34□□□□□ -0.91
ARHGAP28-207ENST00000532996 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
ARHGAP28-207ENST00000532996 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
ARHGAP28-207ENST00000532996 ZNF710Q8N1W2 664 aa9.33□□□□□ -0.92
ARHGAP28-207ENST00000532996 LHX6Q9UPM6 363 aa9.33□□□□□ -0.92
ARHGAP28-207ENST00000532996 IL27Q8NEV9 243 aa9.32□□□□□ -0.92
ARHGAP28-207ENST00000532996 TIMELESSQ9UNS1 1208 aa9.32□□□□□ -0.92
ARHGAP28-207ENST00000532996 OTUD5Q96G74 571 aa9.3□□□□□ -0.92
ARHGAP28-207ENST00000532996 PHOX2BQ99453 314 aa9.3□□□□□ -0.92
ARHGAP28-207ENST00000532996 FAM117AQ9C073 453 aa9.3□□□□□ -0.92
ARHGAP28-207ENST00000532996 FAM161AQ3B820 660 aa9.3□□□□□ -0.92
ARHGAP28-207ENST00000532996 PADI6Q6TGC4 694 aa9.29□□□□□ -0.92
ARHGAP28-207ENST00000532996 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
ARHGAP28-207ENST00000532996 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
ARHGAP28-207ENST00000532996 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
ARHGAP28-207ENST00000532996 HOXB1P14653 301 aaPredicted RBP9.26□□□□□ -0.93
ARHGAP28-207ENST00000532996 TTC13Q8NBP0 860 aa9.26□□□□□ -0.93
ARHGAP28-207ENST00000532996 CERKQ8TCT0 537 aa9.26□□□□□ -0.93
ARHGAP28-207ENST00000532996 COL9A1P20849 921 aa9.25□□□□□ -0.93
ARHGAP28-207ENST00000532996 GIGYF2Q6Y7W6 1299 aaKnown RBP9.25□□□□□ -0.93
ARHGAP28-207ENST00000532996 TMUB1Q9BVT8 246 aa9.25□□□□□ -0.93
ARHGAP28-207ENST00000532996 MS4A1P11836 297 aa9.24□□□□□ -0.93
ARHGAP28-207ENST00000532996 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
ARHGAP28-207ENST00000532996 NLRP7Q8WX94 980 aa9.24□□□□□ -0.93
ARHGAP28-207ENST00000532996 BCL2L12Q9HB09 334 aa9.24□□□□□ -0.93
ARHGAP28-207ENST00000532996 ADGRG1Q9Y653 693 aa9.24□□□□□ -0.93
ARHGAP28-207ENST00000532996 SNPHO15079 494 aa9.23□□□□□ -0.93
ARHGAP28-207ENST00000532996 METTL3Q86U44 580 aaKnown RBP9.23□□□□□ -0.93
ARHGAP28-207ENST00000532996 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
ARHGAP28-207ENST00000532996 FAM198AQ9UFP1 575 aa9.23□□□□□ -0.93
ARHGAP28-207ENST00000532996 PRSS12P56730 875 aa9.22□□□□□ -0.93
ARHGAP28-207ENST00000532996 MDM2Q00987 491 aaPredicted RBP9.22□□□□□ -0.93
ARHGAP28-207ENST00000532996 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
ARHGAP28-207ENST00000532996 PXYLP1Q8TE99 480 aa9.21□□□□□ -0.93
ARHGAP28-207ENST00000532996 PSDA5PKW4 1024 aaPredicted RBP9.21□□□□□ -0.94
ARHGAP28-207ENST00000532996 DDRGK1Q96HY6 314 aa9.21□□□□□ -0.94
ARHGAP28-207ENST00000532996 GPCPD1Q9NPB8 672 aa9.2□□□□□ -0.94
ARHGAP28-207ENST00000532996 PPP1R3GB7ZBB8 358 aa9.19□□□□□ -0.94
ARHGAP28-207ENST00000532996 C3orf80F5H4A9 247 aa9.19□□□□□ -0.94
ARHGAP28-207ENST00000532996 OATP04181 439 aa9.19□□□□□ -0.94
ARHGAP28-207ENST00000532996 CLCN1P35523 988 aa9.19□□□□□ -0.94
ARHGAP28-207ENST00000532996 LHX8Q68G74 356 aa9.19□□□□□ -0.94
ARHGAP28-207ENST00000532996 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
ARHGAP28-207ENST00000532996 TSKSQ9UJT2 592 aa9.19□□□□□ -0.94
ARHGAP28-207ENST00000532996 PTPREP23469 700 aa9.17□□□□□ -0.94
ARHGAP28-207ENST00000532996 FAM217BQ9NTX9 383 aaPredicted RBP9.15□□□□□ -0.94
ARHGAP28-207ENST00000532996 SSTR3P32745 418 aaPredicted RBP9.15□□□□□ -0.95
ARHGAP28-207ENST00000532996 KCNK17Q96T54 332 aa9.15□□□□□ -0.95
ARHGAP28-207ENST00000532996 PROX2Q3B8N5 592 aa9.14□□□□□ -0.95
ARHGAP28-207ENST00000532996 EYA1Q99502 592 aa9.14□□□□□ -0.95
ARHGAP28-207ENST00000532996 RBM46Q8TBY0 533 aaKnown RBP9.13□□□□□ -0.95
ARHGAP28-207ENST00000532996 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
ARHGAP28-207ENST00000532996 C14orf37Q86TY3 774 aa9.13□□□□□ -0.95
ARHGAP28-207ENST00000532996 POTEEQ6S8J3 1075 aa9.12□□□□□ -0.95
ARHGAP28-207ENST00000532996 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
ARHGAP28-207ENST00000532996 RCCD1A6NED2 376 aa9.11□□□□□ -0.95
ARHGAP28-207ENST00000532996 ST18O60284 1047 aa9.11□□□□□ -0.95
ARHGAP28-207ENST00000532996 PSEN2P49810 448 aa9.11□□□□□ -0.95
ARHGAP28-207ENST00000532996 VARS2Q5ST30 1063 aaKnown RBP9.11□□□□□ -0.95
ARHGAP28-207ENST00000532996 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
ARHGAP28-207ENST00000532996 GOPCQ9HD26 462 aa9.1□□□□□ -0.95
ARHGAP28-207ENST00000532996 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
ARHGAP28-207ENST00000532996 SMAPO00193 183 aa9.09□□□□□ -0.95
ARHGAP28-207ENST00000532996 TATDN2Q93075 761 aa9.09□□□□□ -0.95
ARHGAP28-207ENST00000532996 ZBED2Q9BTP6 218 aa9.09□□□□□ -0.95
ARHGAP28-207ENST00000532996 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
ARHGAP28-207ENST00000532996 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
ARHGAP28-207ENST00000532996 ERBB3P21860 1342 aa9.08□□□□□ -0.96
ARHGAP28-207ENST00000532996 NBPF26B4DH59 902 aa9.08□□□□□ -0.96
ARHGAP28-207ENST00000532996 MARVELD3Q96A59 401 aa9.08□□□□□ -0.96
ARHGAP28-207ENST00000532996 AXIN2Q9Y2T1 843 aa9.07□□□□□ -0.96
ARHGAP28-207ENST00000532996 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
ARHGAP28-207ENST00000532996 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
ARHGAP28-207ENST00000532996 ONECUT3O60422 494 aaPredicted RBP9.05□□□□□ -0.96
ARHGAP28-207ENST00000532996 DNAJB2P25686 324 aa9.05□□□□□ -0.96
ARHGAP28-207ENST00000532996 EMP3P54852 163 aa9.05□□□□□ -0.96
ARHGAP28-207ENST00000532996 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
ARHGAP28-207ENST00000532996 TMEM134Q9H6X4 195 aa9.05□□□□□ -0.96
ARHGAP28-207ENST00000532996 KIAA1468Q9P260 1216 aa9.05□□□□□ -0.96
ARHGAP28-207ENST00000532996 ARHGAP33O14559 1287 aa9.04□□□□□ -0.96
ARHGAP28-207ENST00000532996 MYSM1Q5VVJ2 828 aa9.03□□□□□ -0.96
ARHGAP28-207ENST00000532996 KCNH8Q96L42 1107 aa9.03□□□□□ -0.96
ARHGAP28-207ENST00000532996 POTEB3A0JP26 581 aa9.02□□□□□ -0.96
ARHGAP28-207ENST00000532996 CD46P15529 392 aa9.02□□□□□ -0.96
ARHGAP28-207ENST00000532996 POTEBQ6S5H4 581 aa9.02□□□□□ -0.96
ARHGAP28-207ENST00000532996 PCMTD1Q96MG8 357 aaPredicted RBP9.02□□□□□ -0.96
ARHGAP28-207ENST00000532996 FAM205CA6NFA0 338 aa9.02□□□□□ -0.97
ARHGAP28-207ENST00000532996 SKIV2LQ15477 1246 aaKnown RBP9.02□□□□□ -0.97
ARHGAP28-207ENST00000532996 PROCA1Q8NCQ7 364 aaPredicted RBP9.02□□□□□ -0.97
ARHGAP28-207ENST00000532996 DDX11L8A8MPP1 907 aa9.01□□□□□ -0.97
ARHGAP28-207ENST00000532996 TBC1D2Q9BYX2 928 aa9.01□□□□□ -0.97
ARHGAP28-207ENST00000532996 POLR3EQ9NVU0 708 aa9.01□□□□□ -0.97
ARHGAP28-207ENST00000532996 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms