RNA–Protein interactions for RNA: ENST00000529919.5

CTNND1-222, Transcript of catenin delta 1, humanhuman

TSL 5 BASIC

Gene CTNND1, Length 4,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-222ENST00000529919 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-222ENST00000529919 ATF3P18847 181 aa10.02□□□□□ -0.81
CTNND1-222ENST00000529919 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
CTNND1-222ENST00000529919 ROCK2O75116 1388 aaKnown RBP10.02□□□□□ -0.81
CTNND1-222ENST00000529919 POLA1P09884 1462 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-222ENST00000529919 LTV1Q96GA3 475 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-222ENST00000529919 ZNF644Q9H582 1327 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-222ENST00000529919 PTMSP20962 102 aa10.01□□□□□ -0.81
CTNND1-222ENST00000529919 EVA1CP58658 441 aa10.01□□□□□ -0.81
CTNND1-222ENST00000529919 SYNJ2O15056 1496 aa10□□□□□ -0.81
CTNND1-222ENST00000529919 ABCF1Q8NE71 845 aaKnown RBP eCLIP10□□□□□ -0.81
CTNND1-222ENST00000529919 AMPHP49418 695 aa10□□□□□ -0.81
CTNND1-222ENST00000529919 CALD1Q05682 793 aaKnown RBP10□□□□□ -0.81
CTNND1-222ENST00000529919 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
CTNND1-222ENST00000529919 RWDD1Q9H446 243 aaPredicted RBP10□□□□□ -0.81
CTNND1-222ENST00000529919 MFAP1P55081 439 aaKnown RBP9.99□□□□□ -0.81
CTNND1-222ENST00000529919 KIAA1211Q6ZU35 1233 aa9.99□□□□□ -0.81
CTNND1-222ENST00000529919 SYAP1Q96A49 352 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-222ENST00000529919 IPO8O15397 1037 aaKnown RBP9.99□□□□□ -0.81
CTNND1-222ENST00000529919 BICRAQ9NZM4 1560 aa9.99□□□□□ -0.81
CTNND1-222ENST00000529919 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.99□□□□□ -0.812e-8■□□□□ 11.3
CTNND1-222ENST00000529919 EIF3AQ14152 1382 aaKnown RBP9.98□□□□□ -0.81
CTNND1-222ENST00000529919 RAB3GAP2Q9H2M9 1393 aa9.98□□□□□ -0.81
CTNND1-222ENST00000529919 CCDC144AA2RUR9 1427 aa9.98□□□□□ -0.81
CTNND1-222ENST00000529919 TXNDC2Q86VQ3 553 aa9.98□□□□□ -0.81
CTNND1-222ENST00000529919 USP35Q9P2H5 1018 aa9.97□□□□□ -0.81
CTNND1-222ENST00000529919 PSME1Q06323 249 aa9.97□□□□□ -0.81
CTNND1-222ENST00000529919 GOLGA2Q08379 1002 aa9.97□□□□□ -0.81
CTNND1-222ENST00000529919 ITPRIPQ8IWB1 547 aa9.97□□□□□ -0.81
CTNND1-222ENST00000529919 MINK1Q8N4C8 1332 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-222ENST00000529919 GNL2Q13823 731 aaKnown RBP9.96□□□□□ -0.81
CTNND1-222ENST00000529919 PROSER2Q86WR7 435 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-222ENST00000529919 THEMISQ8N1K5 641 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-222ENST00000529919 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.82
CTNND1-222ENST00000529919 RSPH6AQ9H0K4 717 aa9.96□□□□□ -0.82
CTNND1-222ENST00000529919 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
CTNND1-222ENST00000529919 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.822e-10■■□□□ 12.3
CTNND1-222ENST00000529919 CLUAP1Q96AJ1 413 aa9.95□□□□□ -0.82
CTNND1-222ENST00000529919 LAMC3Q9Y6N6 1575 aa9.95□□□□□ -0.82
CTNND1-222ENST00000529919 KTN1Q86UP2 1357 aaKnown RBP9.95□□□□□ -0.82
CTNND1-222ENST00000529919 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
CTNND1-222ENST00000529919 KIF15Q9NS87 1388 aa9.95□□□□□ -0.82
CTNND1-222ENST00000529919 PRDM2Q13029 1718 aa9.94□□□□□ -0.82
CTNND1-222ENST00000529919 MYOM3Q5VTT5 1437 aa9.94□□□□□ -0.82
CTNND1-222ENST00000529919 UACAQ9BZF9 1416 aa9.94□□□□□ -0.82
CTNND1-222ENST00000529919 SLC4A3P48751 1232 aa9.94□□□□□ -0.82
CTNND1-222ENST00000529919 GSE1Q14687 1217 aa9.94□□□□□ -0.82
CTNND1-222ENST00000529919 POGZQ7Z3K3 1410 aa9.94□□□□□ -0.82
CTNND1-222ENST00000529919 HTATSF1O43719 755 aaKnown RBP9.94□□□□□ -0.82
CTNND1-222ENST00000529919 TMX4Q9H1E5 349 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-222ENST00000529919 SCAPERQ9BY12 1400 aa9.93□□□□□ -0.82
CTNND1-222ENST00000529919 PMFBP1Q8TBY8 1022 aa9.93□□□□□ -0.82
CTNND1-222ENST00000529919 ARHGAP5Q13017 1502 aa9.93□□□□□ -0.82
CTNND1-222ENST00000529919 MSH5O43196 834 aa9.92□□□□□ -0.82
CTNND1-222ENST00000529919 NCBP3Q53F19 620 aaKnown RBP9.92□□□□□ -0.82
CTNND1-222ENST00000529919 RALBP1Q15311 655 aa9.92□□□□□ -0.82
CTNND1-222ENST00000529919 ANKLE2Q86XL3 938 aa9.91□□□□□ -0.82
CTNND1-222ENST00000529919 PIP4K2BP78356 416 aa9.91□□□□□ -0.82
CTNND1-222ENST00000529919 CLSTN1O94985 981 aa9.91□□□□□ -0.82
CTNND1-222ENST00000529919 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
CTNND1-222ENST00000529919 NOC3LQ8WTT2 800 aaKnown RBP9.91□□□□□ -0.82
CTNND1-222ENST00000529919 DNMBPQ6XZF7 1577 aa9.91□□□□□ -0.82
CTNND1-222ENST00000529919 PDE4AP27815 886 aa9.91□□□□□ -0.82
CTNND1-222ENST00000529919 GOLGA6L1Q8N7Z2 621 aa9.9□□□□□ -0.82
CTNND1-222ENST00000529919 SMC4Q9NTJ3 1288 aa9.9□□□□□ -0.82
CTNND1-222ENST00000529919 GTF2E1P29083 439 aaPredicted RBP9.9□□□□□ -0.82
CTNND1-222ENST00000529919 DDX49Q9Y6V7 483 aaKnown RBP9.9□□□□□ -0.82
CTNND1-222ENST00000529919 EVC2Q86UK5 1308 aa9.89□□□□□ -0.83
CTNND1-222ENST00000529919 COG3Q96JB2 828 aa9.89□□□□□ -0.83
CTNND1-222ENST00000529919 ISY1Q9ULR0 285 aaKnown RBP9.89□□□□□ -0.83
CTNND1-222ENST00000529919 TRIM6-TRIM34B2RNG4 842 aa9.89□□□□□ -0.83
CTNND1-222ENST00000529919 TPM4P67936 248 aa9.89□□□□□ -0.83
CTNND1-222ENST00000529919 FOXD4L5Q5VV16 416 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-222ENST00000529919 FOXD4L4Q8WXT5 416 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-222ENST00000529919 DDX11L8A8MPP1 907 aa9.88□□□□□ -0.83
CTNND1-222ENST00000529919 PDE3BQ13370 1112 aa9.88□□□□□ -0.83
CTNND1-222ENST00000529919 NLRP13Q86W25 1043 aa9.88□□□□□ -0.83
CTNND1-222ENST00000529919 SYTL4Q96C24 671 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-222ENST00000529919 CUX1P39880 1505 aa9.88□□□□□ -0.83
CTNND1-222ENST00000529919 KIAA0586Q9BVV6 1533 aa9.88□□□□□ -0.83
CTNND1-222ENST00000529919 CD109Q6YHK3 1445 aa9.88□□□□□ -0.83
CTNND1-222ENST00000529919 PHF14O94880 888 aa9.87□□□□□ -0.83
CTNND1-222ENST00000529919 SLC26A8Q96RN1 970 aa9.87□□□□□ -0.83
CTNND1-222ENST00000529919 ST18O60284 1047 aa9.87□□□□□ -0.83
CTNND1-222ENST00000529919 CCDC34Q96HJ3 373 aa9.87□□□□□ -0.83
CTNND1-222ENST00000529919 CENPJQ9HC77 1338 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-222ENST00000529919 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-222ENST00000529919 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-222ENST00000529919 CSPP1Q1MSJ5 1256 aa9.86□□□□□ -0.83
CTNND1-222ENST00000529919 FAM161AQ3B820 660 aa9.86□□□□□ -0.83
CTNND1-222ENST00000529919 NUTM2AQ8IVF1 878 aaPredicted RBP9.86□□□□□ -0.83
CTNND1-222ENST00000529919 CHMP4AQ9BY43 222 aa9.86□□□□□ -0.83
CTNND1-222ENST00000529919 ST20-MTHFSA0A0A6YYL1 179 aa9.86□□□□□ -0.83
CTNND1-222ENST00000529919 HSP90B1P14625 803 aaKnown RBP9.86□□□□□ -0.83
CTNND1-222ENST00000529919 ESCO1Q5FWF5 840 aa9.86□□□□□ -0.83
CTNND1-222ENST00000529919 FANCIQ9NVI1 1328 aa9.86□□□□□ -0.83
CTNND1-222ENST00000529919 ANKRD50Q9ULJ7 1429 aa9.85□□□□□ -0.83
CTNND1-222ENST00000529919 HMMRO75330 724 aa9.85□□□□□ -0.83
CTNND1-222ENST00000529919 A0A0U1RQG5 324 aaPredicted RBP9.85□□□□□ -0.83
CTNND1-222ENST00000529919 TMEM132EQ6IEE7 984 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms