RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 PRKCSHP14314 528 aaPredicted RBP10.25□□□□□ -0.77
SOX6-212ENST00000529469 ZC3H15Q8WU90 426 aaKnown RBP10.25□□□□□ -0.77
SOX6-212ENST00000529469 HS3ST6Q96QI5 342 aa10.25□□□□□ -0.77
SOX6-212ENST00000529469 BCL2L12Q9HB09 334 aa10.25□□□□□ -0.77
SOX6-212ENST00000529469 C6orf132Q5T0Z8 1188 aa10.24□□□□□ -0.77
SOX6-212ENST00000529469 PTGDRQ13258 359 aa10.22□□□□□ -0.77
SOX6-212ENST00000529469 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
SOX6-212ENST00000529469 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
SOX6-212ENST00000529469 NPDC1Q9NQX5 325 aaPredicted RBP10.21□□□□□ -0.77
SOX6-212ENST00000529469 COL9A1P20849 921 aa10.2□□□□□ -0.78
SOX6-212ENST00000529469 FCHSD2O94868 740 aa10.19□□□□□ -0.78
SOX6-212ENST00000529469 PTPREP23469 700 aa10.19□□□□□ -0.78
SOX6-212ENST00000529469 ZMYND10O75800 440 aa10.18□□□□□ -0.78
SOX6-212ENST00000529469 PSEN2P49810 448 aa10.18□□□□□ -0.78
SOX6-212ENST00000529469 ZNF687Q8N1G0 1237 aa10.18□□□□□ -0.78
SOX6-212ENST00000529469 AXIN2Q9Y2T1 843 aa10.18□□□□□ -0.78
SOX6-212ENST00000529469 PPP1R3GB7ZBB8 358 aa10.17□□□□□ -0.78
SOX6-212ENST00000529469 FECHP22830 423 aa10.16□□□□□ -0.78
SOX6-212ENST00000529469 HIC1Q14526 733 aa10.16□□□□□ -0.78
SOX6-212ENST00000529469 ARHGAP33O14559 1287 aa10.15□□□□□ -0.78
SOX6-212ENST00000529469 GNPATO15228 680 aa10.15□□□□□ -0.78
SOX6-212ENST00000529469 PBX2P40425 430 aa10.14□□□□□ -0.79
SOX6-212ENST00000529469 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
SOX6-212ENST00000529469 POTEGQ6S5H5 508 aa10.14□□□□□ -0.79
SOX6-212ENST00000529469 BARGINQ6ZT62 677 aa10.14□□□□□ -0.79
SOX6-212ENST00000529469 CERKQ8TCT0 537 aa10.14□□□□□ -0.79
SOX6-212ENST00000529469 KCNH8Q96L42 1107 aa10.13□□□□□ -0.79
SOX6-212ENST00000529469 POTEMA6NI47 508 aa10.12□□□□□ -0.79
SOX6-212ENST00000529469 PADI6Q6TGC4 694 aa10.12□□□□□ -0.79
SOX6-212ENST00000529469 PRSS12P56730 875 aa10.11□□□□□ -0.79
SOX6-212ENST00000529469 PROX2Q3B8N5 592 aa10.11□□□□□ -0.79
SOX6-212ENST00000529469 CDCA7LQ96GN5 454 aa10.11□□□□□ -0.79
SOX6-212ENST00000529469 ZBED2Q9BTP6 218 aa10.1□□□□□ -0.79
SOX6-212ENST00000529469 SLC24A3Q9HC58 644 aa10.1□□□□□ -0.79
SOX6-212ENST00000529469 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
SOX6-212ENST00000529469 FAM198AQ9UFP1 575 aa10.1□□□□□ -0.79
SOX6-212ENST00000529469 MAP2K5Q13163 448 aa10.09□□□□□ -0.79
SOX6-212ENST00000529469 TTC13Q8NBP0 860 aa10.09□□□□□ -0.79
SOX6-212ENST00000529469 TSKSQ9UJT2 592 aa10.09□□□□□ -0.79
SOX6-212ENST00000529469 TRIM6-TRIM34B2RNG4 842 aa10.07□□□□□ -0.8
SOX6-212ENST00000529469 LSM11P83369 360 aaKnown RBP eCLIP10.07□□□□□ -0.8
SOX6-212ENST00000529469 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
SOX6-212ENST00000529469 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
SOX6-212ENST00000529469 FAM161AQ3B820 660 aa10.06□□□□□ -0.8
SOX6-212ENST00000529469 KRI1Q8N9T8 703 aaKnown RBP10.06□□□□□ -0.8
SOX6-212ENST00000529469 CCDC102AQ96A19 550 aa10.06□□□□□ -0.8
SOX6-212ENST00000529469 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
SOX6-212ENST00000529469 IRF6O14896 467 aa10.05□□□□□ -0.8
SOX6-212ENST00000529469 MINK1Q8N4C8 1332 aaPredicted RBP10.05□□□□□ -0.8
SOX6-212ENST00000529469 SLC4A5Q9BY07 1137 aa10.04□□□□□ -0.8
SOX6-212ENST00000529469 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
SOX6-212ENST00000529469 ADGRG1Q9Y653 693 aa10.04□□□□□ -0.8
SOX6-212ENST00000529469 CDAN1Q8IWY9 1227 aa10.03□□□□□ -0.8
SOX6-212ENST00000529469 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
SOX6-212ENST00000529469 ADGRD1Q6QNK2 874 aa10.01□□□□□ -0.81
SOX6-212ENST00000529469 TK2O00142 265 aa10□□□□□ -0.81
SOX6-212ENST00000529469 ONECUT3O60422 494 aaPredicted RBP10□□□□□ -0.81
SOX6-212ENST00000529469 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
SOX6-212ENST00000529469 PACS2Q86VP3 889 aa10□□□□□ -0.81
SOX6-212ENST00000529469 AK7Q96M32 723 aa10□□□□□ -0.81
SOX6-212ENST00000529469 RABGEF1Q9UJ41 708 aa10□□□□□ -0.81
SOX6-212ENST00000529469 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
SOX6-212ENST00000529469 SMAPO00193 183 aa9.99□□□□□ -0.81
SOX6-212ENST00000529469 NUDT18Q6ZVK8 323 aa9.99□□□□□ -0.81
SOX6-212ENST00000529469 METTL3Q86U44 580 aaKnown RBP9.99□□□□□ -0.81
SOX6-212ENST00000529469 PHOX2BQ99453 314 aa9.99□□□□□ -0.81
SOX6-212ENST00000529469 PNMA3Q9UL41 463 aa9.99□□□□□ -0.81
SOX6-212ENST00000529469 PXYLP1Q8TE99 480 aa9.98□□□□□ -0.81
SOX6-212ENST00000529469 TATDN2Q93075 761 aa9.98□□□□□ -0.81
SOX6-212ENST00000529469 TRIM66O15016 1216 aa9.97□□□□□ -0.81
SOX6-212ENST00000529469 EYA1Q99502 592 aa9.97□□□□□ -0.81
SOX6-212ENST00000529469 SEPT9Q9UHD8 586 aaPredicted RBP9.97□□□□□ -0.81
SOX6-212ENST00000529469 BHMG1C9JSJ3 638 aaPredicted RBP9.96□□□□□ -0.82
SOX6-212ENST00000529469 HRO43593 1189 aa9.96□□□□□ -0.82
SOX6-212ENST00000529469 OATP04181 439 aa9.96□□□□□ -0.82
SOX6-212ENST00000529469 NLRP7Q8WX94 980 aa9.96□□□□□ -0.82
SOX6-212ENST00000529469 RBM46Q8TBY0 533 aaKnown RBP9.95□□□□□ -0.82
SOX6-212ENST00000529469 NBPF3Q9H094 633 aa9.94□□□□□ -0.82
SOX6-212ENST00000529469 AMHR2Q16671 573 aa9.93□□□□□ -0.82
SOX6-212ENST00000529469 RCCD1A6NED2 376 aa9.92□□□□□ -0.82
SOX6-212ENST00000529469 PDE4DQ08499 809 aa9.92□□□□□ -0.82
SOX6-212ENST00000529469 FAM98CQ17RN3 349 aaKnown RBP9.91□□□□□ -0.82
SOX6-212ENST00000529469 MDM2Q00987 491 aaPredicted RBP9.9□□□□□ -0.82
SOX6-212ENST00000529469 MRPL50Q8N5N7 158 aaKnown RBP9.9□□□□□ -0.82
SOX6-212ENST00000529469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.89□□□□□ -0.83
SOX6-212ENST00000529469 DNAJB2P25686 324 aa9.89□□□□□ -0.83
SOX6-212ENST00000529469 BRPF1P55201 1214 aaPredicted RBP9.89□□□□□ -0.83
SOX6-212ENST00000529469 LAPTM4BQ86VI4 370 aa9.89□□□□□ -0.83
SOX6-212ENST00000529469 PARP9Q8IXQ6 854 aa9.89□□□□□ -0.83
SOX6-212ENST00000529469 TTLL12Q14166 644 aaPredicted RBP9.88□□□□□ -0.83
SOX6-212ENST00000529469 REPIN1Q9BWE0 567 aaKnown RBP9.88□□□□□ -0.83
SOX6-212ENST00000529469 TMEM134Q9H6X4 195 aa9.88□□□□□ -0.83
SOX6-212ENST00000529469 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
SOX6-212ENST00000529469 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
SOX6-212ENST00000529469 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
SOX6-212ENST00000529469 TMUB1Q9BVT8 246 aa9.86□□□□□ -0.83
SOX6-212ENST00000529469 CLCN1P35523 988 aa9.85□□□□□ -0.83
SOX6-212ENST00000529469 SWT1Q5T5J6 900 aaKnown RBP9.85□□□□□ -0.83
SOX6-212ENST00000529469 GIGYF2Q6Y7W6 1299 aaKnown RBP9.85□□□□□ -0.83
SOX6-212ENST00000529469 STAC3Q96MF2 364 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms