RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 U2AF1Q01081 240 aaKnown RBP eCLIP9.13□□□□□ -0.952e-10■■□□□ 12.3
CTNND1-218ENST00000528232 GOLGA2Q08379 1002 aa9.13□□□□□ -0.95
CTNND1-218ENST00000528232 CUL7Q14999 1698 aa9.13□□□□□ -0.95
CTNND1-218ENST00000528232 HSP90AB1P08238 724 aaKnown RBP9.13□□□□□ -0.95
CTNND1-218ENST00000528232 NESP48681 1621 aa9.12□□□□□ -0.95
CTNND1-218ENST00000528232 ZBED9Q6R2W3 1325 aa9.12□□□□□ -0.95
CTNND1-218ENST00000528232 GOLGA6L6A8MZA4 724 aa9.12□□□□□ -0.95
CTNND1-218ENST00000528232 CALRP27797 417 aaKnown RBP9.12□□□□□ -0.95
CTNND1-218ENST00000528232 HSCBQ8IWL3 235 aa9.12□□□□□ -0.95
CTNND1-218ENST00000528232 RTF1Q92541 710 aaKnown RBP9.12□□□□□ -0.95
CTNND1-218ENST00000528232 RWDD1Q9H446 243 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-218ENST00000528232 A0A0G2JS52 829 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 NRDCO43847 1150 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 CNTLNQ9NXG0 1405 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 PMFBP1Q8TBY8 1022 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 MIA2Q96PC5 1412 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 UNC13AQ9UPW8 1703 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 ANKRD50Q9ULJ7 1429 aa9.11□□□□□ -0.95
CTNND1-218ENST00000528232 PANK3Q9H999 370 aa9.1□□□□□ -0.95
CTNND1-218ENST00000528232 TSHZ2Q9NRE2 1034 aa9.1□□□□□ -0.95
CTNND1-218ENST00000528232 CCDC7Q96M83 1385 aa9.1□□□□□ -0.95
CTNND1-218ENST00000528232 SYNJ2O15056 1496 aa9.1□□□□□ -0.95
CTNND1-218ENST00000528232 OS9Q13438 667 aaPredicted RBP9.1□□□□□ -0.95
CTNND1-218ENST00000528232 BIVM-ERCC5R4GMW8 1640 aa9.1□□□□□ -0.95
CTNND1-218ENST00000528232 MAP7D2Q96T17 732 aa9.1□□□□□ -0.95
CTNND1-218ENST00000528232 ABCA10Q8WWZ4 1543 aa9.09□□□□□ -0.95
CTNND1-218ENST00000528232 STAC3Q96MF2 364 aa9.09□□□□□ -0.95
CTNND1-218ENST00000528232 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.09□□□□□ -0.95
CTNND1-218ENST00000528232 MTERF4Q7Z6M4 381 aaKnown RBP9.09□□□□□ -0.95
CTNND1-218ENST00000528232 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
CTNND1-218ENST00000528232 ARHGAP5Q13017 1502 aa9.09□□□□□ -0.95
CTNND1-218ENST00000528232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.08□□□□□ -0.96
CTNND1-218ENST00000528232 ZNF644Q9H582 1327 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-218ENST00000528232 CENPJQ9HC77 1338 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-218ENST00000528232 ITPRIPQ8IWB1 547 aa9.08□□□□□ -0.96
CTNND1-218ENST00000528232 GOLGA6L3A6NEY3 463 aa9.08□□□□□ -0.96
CTNND1-218ENST00000528232 MCCP23508 829 aa9.08□□□□□ -0.96
CTNND1-218ENST00000528232 HFM1A2PYH4 1435 aa9.08□□□□□ -0.96
CTNND1-218ENST00000528232 A0A0U1RQG5 324 aaPredicted RBP9.08□□□□□ -0.96
CTNND1-218ENST00000528232 CCDC146Q8IYE0 955 aa9.07□□□□□ -0.96
CTNND1-218ENST00000528232 PCF11O94913 1555 aaKnown RBP9.07□□□□□ -0.96
CTNND1-218ENST00000528232 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
CTNND1-218ENST00000528232 SOX12O15370 315 aa9.07□□□□□ -0.96
CTNND1-218ENST00000528232 LMOD3Q0VAK6 560 aa9.07□□□□□ -0.96
CTNND1-218ENST00000528232 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
CTNND1-218ENST00000528232 EVC2Q86UK5 1308 aa9.07□□□□□ -0.96
CTNND1-218ENST00000528232 FANCIQ9NVI1 1328 aa9.06□□□□□ -0.96
CTNND1-218ENST00000528232 MAP3K1Q13233 1512 aa9.06□□□□□ -0.96
CTNND1-218ENST00000528232 KIF7Q2M1P5 1343 aa9.06□□□□□ -0.96
CTNND1-218ENST00000528232 TRHP20396 242 aaPredicted RBP9.06□□□□□ -0.96
CTNND1-218ENST00000528232 CGNL1Q0VF96 1302 aa9.06□□□□□ -0.96
CTNND1-218ENST00000528232 SNAPC4Q5SXM2 1469 aa9.06□□□□□ -0.96
CTNND1-218ENST00000528232 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
CTNND1-218ENST00000528232 SMC4Q9NTJ3 1288 aa9.06□□□□□ -0.96
CTNND1-218ENST00000528232 PLEKHH2Q8IVE3 1493 aa9.05□□□□□ -0.96
CTNND1-218ENST00000528232 EID1Q9Y6B2 187 aa9.05□□□□□ -0.96
CTNND1-218ENST00000528232 IQGAP2Q13576 1575 aa9.05□□□□□ -0.96
CTNND1-218ENST00000528232 NUTM2DQ5VT03 806 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-218ENST00000528232 TROQ12816 1431 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-218ENST00000528232 PRG4Q92954 1404 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-218ENST00000528232 E9PSI1 815 aa9.04□□□□□ -0.96
CTNND1-218ENST00000528232 RRP1P56182 461 aaKnown RBP9.04□□□□□ -0.96
CTNND1-218ENST00000528232 NGEFQ8N5V2 710 aa9.04□□□□□ -0.96
CTNND1-218ENST00000528232 AMER1Q5JTC6 1135 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-218ENST00000528232 IPO9Q96P70 1041 aaKnown RBP9.04□□□□□ -0.96
CTNND1-218ENST00000528232 KCNJ4P48050 445 aa9.03□□□□□ -0.96
CTNND1-218ENST00000528232 DAPK1P53355 1430 aa9.03□□□□□ -0.96
CTNND1-218ENST00000528232 C9orf84Q5VXU9 1444 aa9.03□□□□□ -0.96
CTNND1-218ENST00000528232 KIAA1107Q9UPP5 1409 aa9.03□□□□□ -0.96
CTNND1-218ENST00000528232 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
CTNND1-218ENST00000528232 KIAA2012Q0VF49 1180 aa9.03□□□□□ -0.96
CTNND1-218ENST00000528232 CENPQQ7L2Z9 268 aaPredicted RBP9.02□□□□□ -0.96
CTNND1-218ENST00000528232 OSCARQ8IYS5 282 aa9.02□□□□□ -0.96
CTNND1-218ENST00000528232 TULP1O00294 542 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-218ENST00000528232 PAK3O75914 559 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-218ENST00000528232 SETQ01105 290 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-218ENST00000528232 EPRSP07814 1512 aaKnown RBP9.02□□□□□ -0.97
CTNND1-218ENST00000528232 STK31Q9BXU1 1019 aa9.02□□□□□ -0.97
CTNND1-218ENST00000528232 TPRNQ4KMQ1 711 aa9.01□□□□□ -0.97
CTNND1-218ENST00000528232 KIAA0586Q9BVV6 1533 aa9.01□□□□□ -0.97
CTNND1-218ENST00000528232 BRD4O60885 1362 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-218ENST00000528232 WASHC2AQ641Q2 1341 aa9.01□□□□□ -0.97
CTNND1-218ENST00000528232 PTPN23Q9H3S7 1636 aa9.01□□□□□ -0.97
CTNND1-218ENST00000528232 FGD1P98174 961 aa9□□□□□ -0.97
CTNND1-218ENST00000528232 HMMRO75330 724 aa9□□□□□ -0.97
CTNND1-218ENST00000528232 ROCK1Q13464 1354 aa9□□□□□ -0.97
CTNND1-218ENST00000528232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9□□□□□ -0.972e-8■□□□□ 11.3
CTNND1-218ENST00000528232 GOLGA6L1Q8N7Z2 621 aa9□□□□□ -0.97
CTNND1-218ENST00000528232 UBE2Q2Q8WVN8 375 aa9□□□□□ -0.97
CTNND1-218ENST00000528232 APPP05067 770 aa8.99□□□□□ -0.97
CTNND1-218ENST00000528232 GBP4Q96PP9 640 aa8.99□□□□□ -0.97
CTNND1-218ENST00000528232 CDK13Q14004 1512 aaKnown RBP8.99□□□□□ -0.97
CTNND1-218ENST00000528232 NGDNQ8NEJ9 315 aaKnown RBP8.99□□□□□ -0.97
CTNND1-218ENST00000528232 SPRYD3Q8NCJ5 442 aa8.98□□□□□ -0.97
CTNND1-218ENST00000528232 HDAC5Q9UQL6 1122 aa8.98□□□□□ -0.97
CTNND1-218ENST00000528232 WDR97A6NE52 1622 aa8.98□□□□□ -0.97
CTNND1-218ENST00000528232 COG3Q96JB2 828 aa8.98□□□□□ -0.97
CTNND1-218ENST00000528232 KIAA1211Q6ZU35 1233 aa8.98□□□□□ -0.97
CTNND1-218ENST00000528232 EXOC6Q8TAG9 804 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms