RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 BCL2L12Q9HB09 334 aa10.91□□□□□ -0.66
ATPAF1-208ENST00000526821 CECR2Q9BXF3 1484 aa10.89□□□□□ -0.67
ATPAF1-208ENST00000526821 PSEN2P49810 448 aa10.87□□□□□ -0.67
ATPAF1-208ENST00000526821 MMRN1Q13201 1228 aa10.87□□□□□ -0.67
ATPAF1-208ENST00000526821 STAC3Q96MF2 364 aa10.87□□□□□ -0.67
ATPAF1-208ENST00000526821 PCDHGA10Q9Y5H3 936 aa10.87□□□□□ -0.67
ATPAF1-208ENST00000526821 RSF1Q96T23 1441 aaPredicted RBP10.86□□□□□ -0.67
ATPAF1-208ENST00000526821 TK2O00142 265 aa10.86□□□□□ -0.67
ATPAF1-208ENST00000526821 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
ATPAF1-208ENST00000526821 POTEEQ6S8J3 1075 aa10.86□□□□□ -0.67
ATPAF1-208ENST00000526821 ARHGEF1Q92888 912 aaKnown RBP10.86□□□□□ -0.67
ATPAF1-208ENST00000526821 DDX12PQ92771 950 aa10.85□□□□□ -0.67
ATPAF1-208ENST00000526821 ADGRD1Q6QNK2 874 aa10.84□□□□□ -0.67
ATPAF1-208ENST00000526821 ADAM33Q9BZ11 813 aa10.84□□□□□ -0.67
ATPAF1-208ENST00000526821 MYT1LQ9UL68 1186 aa10.84□□□□□ -0.67
ATPAF1-208ENST00000526821 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
ATPAF1-208ENST00000526821 NBR1Q14596 966 aa10.82□□□□□ -0.68
ATPAF1-208ENST00000526821 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
ATPAF1-208ENST00000526821 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
ATPAF1-208ENST00000526821 KCNV2Q8TDN2 545 aa10.81□□□□□ -0.68
ATPAF1-208ENST00000526821 RNF166Q96A37 237 aaPredicted RBP10.81□□□□□ -0.68
ATPAF1-208ENST00000526821 GRXCR2A6NFK2 248 aa10.8□□□□□ -0.68
ATPAF1-208ENST00000526821 PPP1R3GB7ZBB8 358 aa10.79□□□□□ -0.68
ATPAF1-208ENST00000526821 RBM33Q96EV2 1170 aaKnown RBP10.79□□□□□ -0.68
ATPAF1-208ENST00000526821 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
ATPAF1-208ENST00000526821 MAP3K7O43318 606 aa10.78□□□□□ -0.68
ATPAF1-208ENST00000526821 SMARCA4P51532 1647 aa10.77□□□□□ -0.68
ATPAF1-208ENST00000526821 VSIG10Q8N0Z9 540 aa10.77□□□□□ -0.69
ATPAF1-208ENST00000526821 EN1Q05925 392 aaPredicted RBP10.76□□□□□ -0.69
ATPAF1-208ENST00000526821 C6orf132Q5T0Z8 1188 aa10.76□□□□□ -0.69
ATPAF1-208ENST00000526821 VPS9D1Q9Y2B5 631 aa10.76□□□□□ -0.69
ATPAF1-208ENST00000526821 ZBED2Q9BTP6 218 aa10.75□□□□□ -0.69
ATPAF1-208ENST00000526821 NBPF3Q9H094 633 aa10.74□□□□□ -0.69
ATPAF1-208ENST00000526821 GOLGA8CPA6NN73 597 aa10.72□□□□□ -0.69
ATPAF1-208ENST00000526821 HRO43593 1189 aa10.72□□□□□ -0.69
ATPAF1-208ENST00000526821 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
ATPAF1-208ENST00000526821 WIZO95785 1651 aa10.7□□□□□ -0.7
ATPAF1-208ENST00000526821 MRPL50Q8N5N7 158 aaKnown RBP10.7□□□□□ -0.7
ATPAF1-208ENST00000526821 PEG3Q9GZU2 1588 aa10.69□□□□□ -0.7
ATPAF1-208ENST00000526821 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
ATPAF1-208ENST00000526821 COL9A1P20849 921 aa10.69□□□□□ -0.7
ATPAF1-208ENST00000526821 RABGEF1Q9UJ41 708 aa10.68□□□□□ -0.7
ATPAF1-208ENST00000526821 OSBPP22059 807 aa10.67□□□□□ -0.7
ATPAF1-208ENST00000526821 SMYD5Q6GMV2 418 aa10.67□□□□□ -0.7
ATPAF1-208ENST00000526821 TSR1Q2NL82 804 aaKnown RBP10.66□□□□□ -0.7
ATPAF1-208ENST00000526821 KDM2AQ9Y2K7 1162 aa10.66□□□□□ -0.7
ATPAF1-208ENST00000526821 TRIM6-TRIM34B2RNG4 842 aa10.65□□□□□ -0.7
ATPAF1-208ENST00000526821 PROX2Q3B8N5 592 aa10.65□□□□□ -0.7
ATPAF1-208ENST00000526821 PACS2Q86VP3 889 aa10.65□□□□□ -0.7
ATPAF1-208ENST00000526821 EIF4G1Q04637 1599 aaKnown RBP10.65□□□□□ -0.71
ATPAF1-208ENST00000526821 BHMG1C9JSJ3 638 aaPredicted RBP10.64□□□□□ -0.71
ATPAF1-208ENST00000526821 MLLT3P42568 568 aaPredicted RBP10.63□□□□□ -0.71
ATPAF1-208ENST00000526821 KCTD12Q96CX2 325 aaKnown RBP10.63□□□□□ -0.71
ATPAF1-208ENST00000526821 KIAA1468Q9P260 1216 aa10.63□□□□□ -0.71
ATPAF1-208ENST00000526821 HCSTQ9UBK5 93 aa10.63□□□□□ -0.71
ATPAF1-208ENST00000526821 TOP2AP11388 1531 aaKnown RBP10.63□□□□□ -0.71
ATPAF1-208ENST00000526821 ATAD2BQ9ULI0 1458 aa10.62□□□□□ -0.71
ATPAF1-208ENST00000526821 LAPTM4BQ86VI4 370 aa10.62□□□□□ -0.71
ATPAF1-208ENST00000526821 SEMA3EO15041 775 aa10.61□□□□□ -0.71
ATPAF1-208ENST00000526821 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
ATPAF1-208ENST00000526821 TULP1O00294 542 aaPredicted RBP10.6□□□□□ -0.71
ATPAF1-208ENST00000526821 PRSS12P56730 875 aa10.6□□□□□ -0.71
ATPAF1-208ENST00000526821 WNT2BQ93097 391 aa10.6□□□□□ -0.71
ATPAF1-208ENST00000526821 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
ATPAF1-208ENST00000526821 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
ATPAF1-208ENST00000526821 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
ATPAF1-208ENST00000526821 NBPF26B4DH59 902 aa10.58□□□□□ -0.72
ATPAF1-208ENST00000526821 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.72
ATPAF1-208ENST00000526821 CDHR5Q9HBB8 845 aa10.58□□□□□ -0.72
ATPAF1-208ENST00000526821 NUTM2FA1L443 756 aa10.57□□□□□ -0.72
ATPAF1-208ENST00000526821 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
ATPAF1-208ENST00000526821 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
ATPAF1-208ENST00000526821 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
ATPAF1-208ENST00000526821 SEPT9Q9UHD8 586 aaPredicted RBP10.54□□□□□ -0.72
ATPAF1-208ENST00000526821 TSKSQ9UJT2 592 aa10.54□□□□□ -0.72
ATPAF1-208ENST00000526821 HMGXB3Q12766 1538 aa10.53□□□□□ -0.72
ATPAF1-208ENST00000526821 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
ATPAF1-208ENST00000526821 ZFRQ96KR1 1074 aaKnown RBP10.53□□□□□ -0.72
ATPAF1-208ENST00000526821 BAZ1BQ9UIG0 1483 aaKnown RBP10.53□□□□□ -0.72
ATPAF1-208ENST00000526821 FCHSD2O94868 740 aa10.52□□□□□ -0.73
ATPAF1-208ENST00000526821 HDGFP51858 240 aaKnown RBP10.52□□□□□ -0.73
ATPAF1-208ENST00000526821 PTPN5P54829 565 aa10.52□□□□□ -0.73
ATPAF1-208ENST00000526821 PNMA3Q9UL41 463 aa10.52□□□□□ -0.73
ATPAF1-208ENST00000526821 CCDC88BA6NC98 1476 aa10.51□□□□□ -0.73
ATPAF1-208ENST00000526821 PADI6Q6TGC4 694 aa10.5□□□□□ -0.73
ATPAF1-208ENST00000526821 TATDN2Q93075 761 aa10.5□□□□□ -0.73
ATPAF1-208ENST00000526821 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
ATPAF1-208ENST00000526821 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
ATPAF1-208ENST00000526821 CC2D2AQ9P2K1 1620 aa10.49□□□□□ -0.73
ATPAF1-208ENST00000526821 PTGDRQ13258 359 aa10.49□□□□□ -0.73
ATPAF1-208ENST00000526821 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
ATPAF1-208ENST00000526821 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.48□□□□□ -0.73
ATPAF1-208ENST00000526821 SOWAHBA6NEL2 793 aa10.47□□□□□ -0.73
ATPAF1-208ENST00000526821 NUDT18Q6ZVK8 323 aa10.47□□□□□ -0.73
ATPAF1-208ENST00000526821 NYAP1Q6ZVC0 841 aa10.46□□□□□ -0.73
ATPAF1-208ENST00000526821 SMAPO00193 183 aa10.45□□□□□ -0.74
ATPAF1-208ENST00000526821 HIC1Q14526 733 aa10.45□□□□□ -0.74
ATPAF1-208ENST00000526821 RBM26Q5T8P6 1007 aaKnown RBP10.45□□□□□ -0.74
ATPAF1-208ENST00000526821 TTC13Q8NBP0 860 aa10.45□□□□□ -0.74
ATPAF1-208ENST00000526821 FAM198AQ9UFP1 575 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms