RNA–Protein interactions for RNA: ENST00000526305.1

AP001646.3-201, humanhuman

TSL 2 BASIC

Gene AP001646.3, Length 446 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001646.3-201ENST00000526305 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
AP001646.3-201ENST00000526305 PTPN5P54829 565 aa12.83□□□□□ -0.36
AP001646.3-201ENST00000526305 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
AP001646.3-201ENST00000526305 DDX12PQ92771 950 aa12.83□□□□□ -0.36
AP001646.3-201ENST00000526305 THSD4Q6ZMP0 1018 aa12.82□□□□□ -0.36
AP001646.3-201ENST00000526305 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
AP001646.3-201ENST00000526305 EPAS1Q99814 870 aa12.81□□□□□ -0.36
AP001646.3-201ENST00000526305 WNT2BQ93097 391 aa12.8□□□□□ -0.36
AP001646.3-201ENST00000526305 RABGEF1Q9UJ41 708 aa12.8□□□□□ -0.36
AP001646.3-201ENST00000526305 RBM33Q96EV2 1170 aaKnown RBP12.79□□□□□ -0.36
AP001646.3-201ENST00000526305 NBPF3Q9H094 633 aa12.79□□□□□ -0.36
AP001646.3-201ENST00000526305 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
AP001646.3-201ENST00000526305 PDIA6Q15084 440 aa12.78□□□□□ -0.36
AP001646.3-201ENST00000526305 E2F4Q16254 413 aa12.76□□□□□ -0.37
AP001646.3-201ENST00000526305 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
AP001646.3-201ENST00000526305 NBR1Q14596 966 aa12.72□□□□□ -0.37
AP001646.3-201ENST00000526305 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.37
AP001646.3-201ENST00000526305 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
AP001646.3-201ENST00000526305 TSR1Q2NL82 804 aaKnown RBP12.71□□□□□ -0.37
AP001646.3-201ENST00000526305 ARIH1Q9Y4X5 557 aaPredicted RBP12.71□□□□□ -0.37
AP001646.3-201ENST00000526305 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
AP001646.3-201ENST00000526305 WDR70Q9NW82 654 aa12.7□□□□□ -0.38
AP001646.3-201ENST00000526305 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
AP001646.3-201ENST00000526305 PRIM1P49642 420 aaKnown RBP12.69□□□□□ -0.38
AP001646.3-201ENST00000526305 LAPTM4BQ86VI4 370 aa12.68□□□□□ -0.38
AP001646.3-201ENST00000526305 SEPT9Q9UHD8 586 aaPredicted RBP12.68□□□□□ -0.38
AP001646.3-201ENST00000526305 MAP3K7O43318 606 aa12.67□□□□□ -0.38
AP001646.3-201ENST00000526305 BCAMP50895 628 aa12.66□□□□□ -0.38
AP001646.3-201ENST00000526305 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
AP001646.3-201ENST00000526305 ZFRQ96KR1 1074 aaKnown RBP12.66□□□□□ -0.38
AP001646.3-201ENST00000526305 TSKSQ9UJT2 592 aa12.64□□□□□ -0.39
AP001646.3-201ENST00000526305 SOWAHBA6NEL2 793 aa12.63□□□□□ -0.39
AP001646.3-201ENST00000526305 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
AP001646.3-201ENST00000526305 IFFO2Q5TF58 517 aa12.61□□□□□ -0.39
AP001646.3-201ENST00000526305 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
AP001646.3-201ENST00000526305 OSBPP22059 807 aa12.59□□□□□ -0.39
AP001646.3-201ENST00000526305 FAM98CQ17RN3 349 aaKnown RBP12.59□□□□□ -0.39
AP001646.3-201ENST00000526305 FAM198AQ9UFP1 575 aa12.58□□□□□ -0.4
AP001646.3-201ENST00000526305 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
AP001646.3-201ENST00000526305 WBP1LQ9NX94 342 aa12.57□□□□□ -0.4
AP001646.3-201ENST00000526305 C3orf80F5H4A9 247 aa12.56□□□□□ -0.4
AP001646.3-201ENST00000526305 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
AP001646.3-201ENST00000526305 CDHR5Q9HBB8 845 aa12.56□□□□□ -0.4
AP001646.3-201ENST00000526305 PRSS12P56730 875 aa12.55□□□□□ -0.4
AP001646.3-201ENST00000526305 SMAPO00193 183 aa12.53□□□□□ -0.4
AP001646.3-201ENST00000526305 A0A0G2JS52 829 aa12.52□□□□□ -0.41
AP001646.3-201ENST00000526305 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.52□□□□□ -0.41
AP001646.3-201ENST00000526305 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
AP001646.3-201ENST00000526305 CERKQ8TCT0 537 aa12.51□□□□□ -0.41
AP001646.3-201ENST00000526305 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
AP001646.3-201ENST00000526305 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
AP001646.3-201ENST00000526305 TSR3Q9UJK0 312 aaKnown RBP12.49□□□□□ -0.41
AP001646.3-201ENST00000526305 HPS5Q9UPZ3 1129 aa12.49□□□□□ -0.41
AP001646.3-201ENST00000526305 KCNV2Q8TDN2 545 aa12.47□□□□□ -0.41
AP001646.3-201ENST00000526305 TATDN2Q93075 761 aa12.47□□□□□ -0.41
AP001646.3-201ENST00000526305 NPDC1Q9NQX5 325 aaPredicted RBP12.47□□□□□ -0.41
AP001646.3-201ENST00000526305 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
AP001646.3-201ENST00000526305 SAMD7Q7Z3H4 446 aa12.45□□□□□ -0.42
AP001646.3-201ENST00000526305 ARHGEF1Q92888 912 aaKnown RBP12.45□□□□□ -0.42
AP001646.3-201ENST00000526305 PNMA3Q9UL41 463 aa12.45□□□□□ -0.42
AP001646.3-201ENST00000526305 RGS20O76081 388 aa12.43□□□□□ -0.42
AP001646.3-201ENST00000526305 NUDT18Q6ZVK8 323 aa12.43□□□□□ -0.42
AP001646.3-201ENST00000526305 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
AP001646.3-201ENST00000526305 TTC13Q8NBP0 860 aa12.42□□□□□ -0.42
AP001646.3-201ENST00000526305 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
AP001646.3-201ENST00000526305 PPP4CP60510 307 aa12.4□□□□□ -0.42
AP001646.3-201ENST00000526305 KCNC4Q03721 635 aa12.4□□□□□ -0.42
AP001646.3-201ENST00000526305 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
AP001646.3-201ENST00000526305 TJAP1Q5JTD0 557 aa12.33□□□□□ -0.44
AP001646.3-201ENST00000526305 EYA1Q99502 592 aa12.31□□□□□ -0.44
AP001646.3-201ENST00000526305 PTGDRQ13258 359 aa12.3□□□□□ -0.44
AP001646.3-201ENST00000526305 RNF40O75150 1001 aa12.29□□□□□ -0.44
AP001646.3-201ENST00000526305 SWT1Q5T5J6 900 aaKnown RBP12.29□□□□□ -0.44
AP001646.3-201ENST00000526305 APLP1P51693 650 aa12.28□□□□□ -0.44
AP001646.3-201ENST00000526305 HDGFP51858 240 aaKnown RBP12.28□□□□□ -0.44
AP001646.3-201ENST00000526305 MTRQ99707 1265 aa12.28□□□□□ -0.44
AP001646.3-201ENST00000526305 SEMA3EO15041 775 aa12.27□□□□□ -0.45
AP001646.3-201ENST00000526305 IRX2Q9BZI1 471 aaPredicted RBP12.27□□□□□ -0.45
AP001646.3-201ENST00000526305 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
AP001646.3-201ENST00000526305 P3H3Q8IVL6 736 aa12.25□□□□□ -0.45
AP001646.3-201ENST00000526305 ZNF516Q92618 1163 aa12.24□□□□□ -0.45
AP001646.3-201ENST00000526305 NUTM2FA1L443 756 aa12.22□□□□□ -0.45
AP001646.3-201ENST00000526305 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
AP001646.3-201ENST00000526305 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
AP001646.3-201ENST00000526305 SLF2Q8IX21 1173 aa12.21□□□□□ -0.45
AP001646.3-201ENST00000526305 ADGRG1Q9Y653 693 aa12.2□□□□□ -0.46
AP001646.3-201ENST00000526305 PPP1R18Q6NYC8 613 aa12.17□□□□□ -0.46
AP001646.3-201ENST00000526305 NKX2-3Q8TAU0 364 aa12.17□□□□□ -0.46
AP001646.3-201ENST00000526305 DNAJB2P25686 324 aa12.16□□□□□ -0.46
AP001646.3-201ENST00000526305 COPS2P61201 443 aa12.16□□□□□ -0.46
AP001646.3-201ENST00000526305 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
AP001646.3-201ENST00000526305 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
AP001646.3-201ENST00000526305 TMEM134Q9H6X4 195 aa12.15□□□□□ -0.46
AP001646.3-201ENST00000526305 FCHSD2O94868 740 aa12.14□□□□□ -0.47
AP001646.3-201ENST00000526305 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
AP001646.3-201ENST00000526305 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
AP001646.3-201ENST00000526305 RBM26Q5T8P6 1007 aaKnown RBP12.12□□□□□ -0.47
AP001646.3-201ENST00000526305 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
AP001646.3-201ENST00000526305 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.1□□□□□ -0.47
AP001646.3-201ENST00000526305 PRKD2Q9BZL6 878 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms