RNA–Protein interactions for RNA: ENST00000524596.1

LIN7C-202, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN7C, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-202ENST00000524596 NBPF6Q5VWK0 638 aa8.68□□□□□ -1.02
LIN7C-202ENST00000524596 NBPF5PQ86XG9 351 aaPredicted RBP8.68□□□□□ -1.02
LIN7C-202ENST00000524596 EXOC8Q8IYI6 725 aa8.68□□□□□ -1.02
LIN7C-202ENST00000524596 NBPF4Q96M43 638 aa8.68□□□□□ -1.02
LIN7C-202ENST00000524596 GTF2A1P52655 376 aaPredicted RBP8.68□□□□□ -1.02
LIN7C-202ENST00000524596 KIF3AQ9Y496 699 aa8.68□□□□□ -1.02
LIN7C-202ENST00000524596 NBPF20Q3BBV1 942 aa8.67□□□□□ -1.02
LIN7C-202ENST00000524596 BECN1Q14457 450 aa8.67□□□□□ -1.02
LIN7C-202ENST00000524596 DCAF1Q9Y4B6 1507 aa8.67□□□□□ -1.02
LIN7C-202ENST00000524596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.67□□□□□ -1.02
LIN7C-202ENST00000524596 NBPF11Q86T75 865 aa8.67□□□□□ -1.02
LIN7C-202ENST00000524596 TRIM6-TRIM34B2RNG4 842 aa8.66□□□□□ -1.02
LIN7C-202ENST00000524596 TRIM34Q9BYJ4 488 aa8.66□□□□□ -1.02
LIN7C-202ENST00000524596 H0YHG0 523 aa8.66□□□□□ -1.02
LIN7C-202ENST00000524596 SARNPP82979 210 aaKnown RBP8.66□□□□□ -1.02
LIN7C-202ENST00000524596 MYCBPQ99417 103 aaPredicted RBP8.66□□□□□ -1.02
LIN7C-202ENST00000524596 MTMR7Q9Y216 660 aa8.66□□□□□ -1.02
LIN7C-202ENST00000524596 APBB1O00213 710 aa8.66□□□□□ -1.02
LIN7C-202ENST00000524596 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
LIN7C-202ENST00000524596 CWC15Q9P013 229 aaKnown RBP8.66□□□□□ -1.02
LIN7C-202ENST00000524596 CALCOCO1Q9P1Z2 691 aa8.66□□□□□ -1.02
LIN7C-202ENST00000524596 MSH5O43196 834 aa8.65□□□□□ -1.03
LIN7C-202ENST00000524596 UTP14CQ5TAP6 766 aaKnown RBP8.64□□□□□ -1.03
LIN7C-202ENST00000524596 NBPF9Q3BBW0 867 aa8.64□□□□□ -1.03
LIN7C-202ENST00000524596 CREBRFQ8IUR6 639 aa8.64□□□□□ -1.03
LIN7C-202ENST00000524596 PPP4R2Q9NY27 417 aa8.64□□□□□ -1.03
LIN7C-202ENST00000524596 KCNJ4P48050 445 aa8.63□□□□□ -1.03
LIN7C-202ENST00000524596 HTATSF1O43719 755 aaKnown RBP8.63□□□□□ -1.03
LIN7C-202ENST00000524596 KNSTRNQ9Y448 316 aa8.63□□□□□ -1.03
LIN7C-202ENST00000524596 TIGD1Q96MW7 591 aa8.63□□□□□ -1.03
LIN7C-202ENST00000524596 ZNF513Q8N8E2 541 aaPredicted RBP8.62□□□□□ -1.03
LIN7C-202ENST00000524596 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
LIN7C-202ENST00000524596 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
LIN7C-202ENST00000524596 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
LIN7C-202ENST00000524596 CCDC181Q5TID7 509 aa8.62□□□□□ -1.03
LIN7C-202ENST00000524596 ISY1Q9ULR0 285 aaKnown RBP8.62□□□□□ -1.03
LIN7C-202ENST00000524596 ZRANB2O95218 330 aaKnown RBP eCLIP8.62□□□□□ -1.03
LIN7C-202ENST00000524596 TNNT1P13805 278 aa8.61□□□□□ -1.03
LIN7C-202ENST00000524596 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
LIN7C-202ENST00000524596 PIK3R5Q8WYR1 880 aa8.61□□□□□ -1.03
LIN7C-202ENST00000524596 CFAP53Q96M91 514 aa8.61□□□□□ -1.03
LIN7C-202ENST00000524596 ABCC9O60706 1549 aa8.61□□□□□ -1.03
LIN7C-202ENST00000524596 TPM3P06753 285 aa8.6□□□□□ -1.03
LIN7C-202ENST00000524596 SATB1Q01826 763 aa8.6□□□□□ -1.03
LIN7C-202ENST00000524596 SPTY2D1Q68D10 685 aaPredicted RBP8.6□□□□□ -1.03
LIN7C-202ENST00000524596 FRMD4BQ9Y2L6 1034 aa8.6□□□□□ -1.03
LIN7C-202ENST00000524596 SH3BP5O60239 455 aa8.6□□□□□ -1.03
LIN7C-202ENST00000524596 LRCH2Q5VUJ6 765 aa8.59□□□□□ -1.03
LIN7C-202ENST00000524596 RPAINQ86UA6 219 aa8.59□□□□□ -1.03
LIN7C-202ENST00000524596 ANKRD13AQ8IZ07 590 aa8.59□□□□□ -1.03
LIN7C-202ENST00000524596 ZNF428Q96B54 188 aa8.59□□□□□ -1.03
LIN7C-202ENST00000524596 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
LIN7C-202ENST00000524596 RDXP35241 583 aaKnown RBP8.58□□□□□ -1.04
LIN7C-202ENST00000524596 RINLQ6ZS11 566 aa8.58□□□□□ -1.04
LIN7C-202ENST00000524596 ZNF830Q96NB3 372 aaPredicted RBP8.58□□□□□ -1.04
LIN7C-202ENST00000524596 ZCRB1Q8TBF4 217 aaKnown RBP8.58□□□□□ -1.04
LIN7C-202ENST00000524596 NUCKS1Q9H1E3 243 aaKnown RBP8.57□□□□□ -1.04
LIN7C-202ENST00000524596 ZNF500O60304 480 aaPredicted RBP8.57□□□□□ -1.04
LIN7C-202ENST00000524596 CLCN1P35523 988 aa8.57□□□□□ -1.04
LIN7C-202ENST00000524596 TMTC2Q8N394 836 aa8.57□□□□□ -1.04
LIN7C-202ENST00000524596 CHMP3Q9Y3E7 222 aa8.57□□□□□ -1.04
LIN7C-202ENST00000524596 CCDC180Q9P1Z9 1646 aa8.57□□□□□ -1.04
LIN7C-202ENST00000524596 ZNF853P0CG23 659 aa8.57□□□□□ -1.04
LIN7C-202ENST00000524596 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
LIN7C-202ENST00000524596 MFAP1P55081 439 aaKnown RBP8.56□□□□□ -1.04
LIN7C-202ENST00000524596 HSP90AB2PQ58FF8 381 aa8.56□□□□□ -1.04
LIN7C-202ENST00000524596 KIAA1211Q6ZU35 1233 aa8.56□□□□□ -1.04
LIN7C-202ENST00000524596 TRIM41Q8WV44 630 aa8.56□□□□□ -1.04
LIN7C-202ENST00000524596 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.56□□□□□ -1.04
LIN7C-202ENST00000524596 CCDC34Q96HJ3 373 aa8.56□□□□□ -1.04
LIN7C-202ENST00000524596 YY1AP1Q9H869 796 aa8.55□□□□□ -1.04
LIN7C-202ENST00000524596 GEMIN8Q9NWZ8 242 aaKnown RBP8.55□□□□□ -1.04
LIN7C-202ENST00000524596 PPP6R1Q9UPN7 881 aa8.55□□□□□ -1.04
LIN7C-202ENST00000524596 USP8P40818 1118 aa8.55□□□□□ -1.04
LIN7C-202ENST00000524596 ERICH4A6NGS2 130 aa8.55□□□□□ -1.04
LIN7C-202ENST00000524596 ANAPC4Q9UJX5 808 aa8.55□□□□□ -1.04
LIN7C-202ENST00000524596 DHX16O60231 1041 aaKnown RBP8.54□□□□□ -1.04
LIN7C-202ENST00000524596 FRAT1Q92837 279 aaPredicted RBP8.54□□□□□ -1.04
LIN7C-202ENST00000524596 CCER2I3L3R5 266 aa8.54□□□□□ -1.04
LIN7C-202ENST00000524596 SPRYD3Q8NCJ5 442 aa8.54□□□□□ -1.04
LIN7C-202ENST00000524596 EFCC1Q9HA90 598 aa8.54□□□□□ -1.04
LIN7C-202ENST00000524596 CEP83Q9Y592 693 aa8.54□□□□□ -1.04
LIN7C-202ENST00000524596 SH3BGRP55822 239 aaPredicted RBP8.54□□□□□ -1.04
LIN7C-202ENST00000524596 CCDC91Q7Z6B0 441 aa8.54□□□□□ -1.04
LIN7C-202ENST00000524596 GPS2Q13227 327 aa8.54□□□□□ -1.04
LIN7C-202ENST00000524596 NBPF3Q9H094 633 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 IPO7O95373 1038 aaKnown RBP8.53□□□□□ -1.04
LIN7C-202ENST00000524596 TEX35Q5T0J7 233 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 HSCBQ8IWL3 235 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 MPNDQ8N594 471 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 OTUD6BQ8N6M0 293 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 CXorf38Q8TB03 319 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 SMC4Q9NTJ3 1288 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
LIN7C-202ENST00000524596 WASHC2CQ9Y4E1 1318 aa8.53□□□□□ -1.04
LIN7C-202ENST00000524596 DMTNQ08495 405 aa8.52□□□□□ -1.04
LIN7C-202ENST00000524596 CPSF2Q9P2I0 782 aaKnown RBP8.52□□□□□ -1.04
LIN7C-202ENST00000524596 KCNG1Q9UIX4 513 aa8.52□□□□□ -1.04
LIN7C-202ENST00000524596 FOSBP53539 338 aa8.52□□□□□ -1.05
LIN7C-202ENST00000524596 RAI14Q9P0K7 980 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms