RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 EPAS1Q99814 870 aa11.75□□□□□ -0.53
NSMCE2-211ENST00000523549 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
NSMCE2-211ENST00000523549 PROX2Q3B8N5 592 aa11.74□□□□□ -0.53
NSMCE2-211ENST00000523549 WNT2BQ93097 391 aa11.74□□□□□ -0.53
NSMCE2-211ENST00000523549 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
NSMCE2-211ENST00000523549 C6orf132Q5T0Z8 1188 aa11.73□□□□□ -0.53
NSMCE2-211ENST00000523549 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.72□□□□□ -0.53
NSMCE2-211ENST00000523549 GOLGA8CPA6NN73 597 aa11.71□□□□□ -0.53
NSMCE2-211ENST00000523549 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.53
NSMCE2-211ENST00000523549 PDIA6Q15084 440 aa11.69□□□□□ -0.54
NSMCE2-211ENST00000523549 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
NSMCE2-211ENST00000523549 DDX12PQ92771 950 aa11.68□□□□□ -0.54
NSMCE2-211ENST00000523549 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
NSMCE2-211ENST00000523549 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
NSMCE2-211ENST00000523549 LAPTM4BQ86VI4 370 aa11.66□□□□□ -0.54
NSMCE2-211ENST00000523549 SPDYE16A6NNV3 312 aaPredicted RBP11.64□□□□□ -0.55
NSMCE2-211ENST00000523549 E2F4Q16254 413 aa11.64□□□□□ -0.55
NSMCE2-211ENST00000523549 PAXIP1Q6ZW49 1069 aaPredicted RBP11.64□□□□□ -0.55
NSMCE2-211ENST00000523549 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
NSMCE2-211ENST00000523549 TRIM6-TRIM34B2RNG4 842 aa11.62□□□□□ -0.55
NSMCE2-211ENST00000523549 EN1Q05925 392 aaPredicted RBP11.62□□□□□ -0.55
NSMCE2-211ENST00000523549 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
NSMCE2-211ENST00000523549 ANKK1Q8NFD2 765 aa11.61□□□□□ -0.55
NSMCE2-211ENST00000523549 ZFRQ96KR1 1074 aaKnown RBP11.61□□□□□ -0.55
NSMCE2-211ENST00000523549 SOWAHBA6NEL2 793 aa11.6□□□□□ -0.55
NSMCE2-211ENST00000523549 NBR1Q14596 966 aa11.59□□□□□ -0.55
NSMCE2-211ENST00000523549 TSR1Q2NL82 804 aaKnown RBP11.59□□□□□ -0.55
NSMCE2-211ENST00000523549 PRIM1P49642 420 aaKnown RBP11.57□□□□□ -0.56
NSMCE2-211ENST00000523549 BCAMP50895 628 aa11.57□□□□□ -0.56
NSMCE2-211ENST00000523549 SEPT9Q9UHD8 586 aaPredicted RBP11.57□□□□□ -0.56
NSMCE2-211ENST00000523549 WDR70Q9NW82 654 aa11.56□□□□□ -0.56
NSMCE2-211ENST00000523549 TSKSQ9UJT2 592 aa11.56□□□□□ -0.56
NSMCE2-211ENST00000523549 MAP3K7O43318 606 aa11.55□□□□□ -0.56
NSMCE2-211ENST00000523549 FAM98CQ17RN3 349 aaKnown RBP11.55□□□□□ -0.56
NSMCE2-211ENST00000523549 RGS20O76081 388 aa11.54□□□□□ -0.56
NSMCE2-211ENST00000523549 ITGBL1O95965 494 aaPredicted RBP11.53□□□□□ -0.56
NSMCE2-211ENST00000523549 A0A0G2JS52 829 aa11.52□□□□□ -0.57
NSMCE2-211ENST00000523549 NYAP1Q6ZVC0 841 aa11.52□□□□□ -0.57
NSMCE2-211ENST00000523549 OSBPP22059 807 aa11.51□□□□□ -0.57
NSMCE2-211ENST00000523549 PACS2Q86VP3 889 aa11.51□□□□□ -0.57
NSMCE2-211ENST00000523549 WBP1LQ9NX94 342 aa11.51□□□□□ -0.57
NSMCE2-211ENST00000523549 FAM198AQ9UFP1 575 aa11.51□□□□□ -0.57
NSMCE2-211ENST00000523549 GRXCR2A6NFK2 248 aa11.5□□□□□ -0.57
NSMCE2-211ENST00000523549 PRSS12P56730 875 aa11.49□□□□□ -0.57
NSMCE2-211ENST00000523549 CERKQ8TCT0 537 aa11.49□□□□□ -0.57
NSMCE2-211ENST00000523549 CDCA7LQ96GN5 454 aa11.49□□□□□ -0.57
NSMCE2-211ENST00000523549 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.47□□□□□ -0.57
NSMCE2-211ENST00000523549 TSR3Q9UJK0 312 aaKnown RBP11.47□□□□□ -0.57
NSMCE2-211ENST00000523549 C3orf80F5H4A9 247 aa11.45□□□□□ -0.58
NSMCE2-211ENST00000523549 LRCH3Q96II8 777 aa11.45□□□□□ -0.58
NSMCE2-211ENST00000523549 CDHR5Q9HBB8 845 aa11.43□□□□□ -0.58
NSMCE2-211ENST00000523549 HPS5Q9UPZ3 1129 aa11.43□□□□□ -0.58
NSMCE2-211ENST00000523549 SMAPO00193 183 aa11.42□□□□□ -0.58
NSMCE2-211ENST00000523549 TATDN2Q93075 761 aa11.42□□□□□ -0.58
NSMCE2-211ENST00000523549 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
NSMCE2-211ENST00000523549 NPDC1Q9NQX5 325 aaPredicted RBP11.41□□□□□ -0.58
NSMCE2-211ENST00000523549 RBM27Q9P2N5 1060 aaKnown RBP11.4□□□□□ -0.58
NSMCE2-211ENST00000523549 KCNC4Q03721 635 aa11.39□□□□□ -0.59
NSMCE2-211ENST00000523549 TTC13Q8NBP0 860 aa11.39□□□□□ -0.59
NSMCE2-211ENST00000523549 SAMD7Q7Z3H4 446 aa11.38□□□□□ -0.59
NSMCE2-211ENST00000523549 PNMA3Q9UL41 463 aa11.38□□□□□ -0.59
NSMCE2-211ENST00000523549 PPP4CP60510 307 aa11.37□□□□□ -0.59
NSMCE2-211ENST00000523549 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
NSMCE2-211ENST00000523549 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
NSMCE2-211ENST00000523549 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
NSMCE2-211ENST00000523549 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
NSMCE2-211ENST00000523549 KCNV2Q8TDN2 545 aa11.32□□□□□ -0.6
NSMCE2-211ENST00000523549 MLLT3P42568 568 aaPredicted RBP11.31□□□□□ -0.6
NSMCE2-211ENST00000523549 IRX2Q9BZI1 471 aaPredicted RBP11.31□□□□□ -0.6
NSMCE2-211ENST00000523549 PADI6Q6TGC4 694 aa11.3□□□□□ -0.6
NSMCE2-211ENST00000523549 EYA1Q99502 592 aa11.28□□□□□ -0.6
NSMCE2-211ENST00000523549 HDGFP51858 240 aaKnown RBP11.26□□□□□ -0.61
NSMCE2-211ENST00000523549 APLP1P51693 650 aa11.24□□□□□ -0.61
NSMCE2-211ENST00000523549 PTGDRQ13258 359 aa11.24□□□□□ -0.61
NSMCE2-211ENST00000523549 MTRQ99707 1265 aa11.24□□□□□ -0.61
NSMCE2-211ENST00000523549 SWT1Q5T5J6 900 aaKnown RBP11.23□□□□□ -0.61
NSMCE2-211ENST00000523549 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
NSMCE2-211ENST00000523549 ZNF516Q92618 1163 aa11.21□□□□□ -0.61
NSMCE2-211ENST00000523549 SLF2Q8IX21 1173 aa11.19□□□□□ -0.62
NSMCE2-211ENST00000523549 RNF40O75150 1001 aa11.18□□□□□ -0.62
NSMCE2-211ENST00000523549 NECTIN2Q92692 538 aa11.18□□□□□ -0.62
NSMCE2-211ENST00000523549 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
NSMCE2-211ENST00000523549 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
NSMCE2-211ENST00000523549 ADGRG1Q9Y653 693 aa11.15□□□□□ -0.62
NSMCE2-211ENST00000523549 SEMA3EO15041 775 aa11.14□□□□□ -0.63
NSMCE2-211ENST00000523549 NKX2-3Q8TAU0 364 aa11.13□□□□□ -0.63
NSMCE2-211ENST00000523549 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.12□□□□□ -0.63
NSMCE2-211ENST00000523549 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
NSMCE2-211ENST00000523549 DNAJB2P25686 324 aa11.11□□□□□ -0.63
NSMCE2-211ENST00000523549 RBM46Q8TBY0 533 aaKnown RBP11.11□□□□□ -0.63
NSMCE2-211ENST00000523549 TMEM134Q9H6X4 195 aa11.11□□□□□ -0.63
NSMCE2-211ENST00000523549 PRKD2Q9BZL6 878 aa11.1□□□□□ -0.63
NSMCE2-211ENST00000523549 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
NSMCE2-211ENST00000523549 COPS2P61201 443 aa11.09□□□□□ -0.63
NSMCE2-211ENST00000523549 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
NSMCE2-211ENST00000523549 RCCD1A6NED2 376 aa11.08□□□□□ -0.64
NSMCE2-211ENST00000523549 ZPR1O75312 459 aa11.08□□□□□ -0.64
NSMCE2-211ENST00000523549 FAM161AQ3B820 660 aa11.08□□□□□ -0.64
NSMCE2-211ENST00000523549 FCHSD2O94868 740 aa11.07□□□□□ -0.64
NSMCE2-211ENST00000523549 PLCB2Q00722 1185 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms