RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IRF5Q13568 498 aa6.39□□□□□ -1.39
SKP1-209ENST00000522552 G3V3G9 751 aa6.39□□□□□ -1.39
SKP1-209ENST00000522552 BOLA1Q9Y3E2 137 aa6.39□□□□□ -1.39
SKP1-209ENST00000522552 NCKAP5LQ9HCH0 1330 aa6.38□□□□□ -1.39
SKP1-209ENST00000522552 E9PSI1 815 aa6.38□□□□□ -1.39
SKP1-209ENST00000522552 MCM6Q14566 821 aa6.38□□□□□ -1.39
SKP1-209ENST00000522552 PROSER2Q86WR7 435 aaPredicted RBP6.38□□□□□ -1.39
SKP1-209ENST00000522552 PUS7Q96PZ0 661 aaKnown RBP6.38□□□□□ -1.39
SKP1-209ENST00000522552 GOPCQ9HD26 462 aa6.38□□□□□ -1.39
SKP1-209ENST00000522552 L3MBTL3Q96JM7 780 aaPredicted RBP6.37□□□□□ -1.39
SKP1-209ENST00000522552 C3orf67Q6ZVT6 689 aa6.36□□□□□ -1.39
SKP1-209ENST00000522552 MICALL2Q8IY33 904 aa6.36□□□□□ -1.39
SKP1-209ENST00000522552 LARP6Q9BRS8 491 aaKnown RBP6.36□□□□□ -1.39
SKP1-209ENST00000522552 FNBP4Q8N3X1 1017 aaPredicted RBP6.36□□□□□ -1.39
SKP1-209ENST00000522552 FBXW7Q969H0 707 aa6.36□□□□□ -1.39
SKP1-209ENST00000522552 PARP9Q8IXQ6 854 aa6.35□□□□□ -1.39
SKP1-209ENST00000522552 MFSD10Q14728 455 aa6.34□□□□□ -1.39
SKP1-209ENST00000522552 GPR37O15354 613 aa6.33□□□□□ -1.4
SKP1-209ENST00000522552 SLAIN1Q8ND83 568 aa6.33□□□□□ -1.4
SKP1-209ENST00000522552 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.33□□□□□ -1.4
SKP1-209ENST00000522552 CAMK2BQ13554 666 aa6.33□□□□□ -1.4
SKP1-209ENST00000522552 AMHR2Q16671 573 aa6.33□□□□□ -1.4
SKP1-209ENST00000522552 POM121Q96HA1 1249 aa6.33□□□□□ -1.4
SKP1-209ENST00000522552 TMEM121BQ9BXQ6 578 aaPredicted RBP6.32□□□□□ -1.4
SKP1-209ENST00000522552 MINK1Q8N4C8 1332 aaPredicted RBP6.31□□□□□ -1.4
SKP1-209ENST00000522552 PDE4AP27815 886 aa6.31□□□□□ -1.4
SKP1-209ENST00000522552 CCDC102AQ96A19 550 aa6.31□□□□□ -1.4
SKP1-209ENST00000522552 PCMTD1Q96MG8 357 aaPredicted RBP6.31□□□□□ -1.4
SKP1-209ENST00000522552 DDX27Q96GQ7 796 aaKnown RBP6.3□□□□□ -1.4
SKP1-209ENST00000522552 USP35Q9P2H5 1018 aa6.3□□□□□ -1.4
SKP1-209ENST00000522552 TMEM92Q6UXU6 159 aa6.3□□□□□ -1.4
SKP1-209ENST00000522552 CRISPLD2Q9H0B8 497 aa6.29□□□□□ -1.4
SKP1-209ENST00000522552 MAP2K5Q13163 448 aa6.28□□□□□ -1.4
SKP1-209ENST00000522552 CHMP4AQ9BY43 222 aa6.27□□□□□ -1.41
SKP1-209ENST00000522552 IRF6O14896 467 aa6.26□□□□□ -1.41
SKP1-209ENST00000522552 PATL2C9JE40 543 aaKnown RBP6.26□□□□□ -1.41
SKP1-209ENST00000522552 PPP1R15AO75807 674 aaPredicted RBP6.26□□□□□ -1.41
SKP1-209ENST00000522552 AMOTL2Q9Y2J4 779 aa6.26□□□□□ -1.41
SKP1-209ENST00000522552 C2orf72A6NCS6 295 aa6.25□□□□□ -1.41
SKP1-209ENST00000522552 TTLL12Q14166 644 aaPredicted RBP6.25□□□□□ -1.41
SKP1-209ENST00000522552 TMC2Q8TDI7 906 aa6.24□□□□□ -1.41
SKP1-209ENST00000522552 MS4A1P11836 297 aa6.23□□□□□ -1.41
SKP1-209ENST00000522552 PDE4CQ08493 712 aa6.23□□□□□ -1.41
SKP1-209ENST00000522552 RSPH4AQ5TD94 716 aa6.23□□□□□ -1.41
SKP1-209ENST00000522552 COG6Q9Y2V7 657 aa6.23□□□□□ -1.41
SKP1-209ENST00000522552 KCNA1Q09470 495 aa6.23□□□□□ -1.41
SKP1-209ENST00000522552 SH3D19Q5HYK7 790 aa6.23□□□□□ -1.41
SKP1-209ENST00000522552 ZNF330Q9Y3S2 320 aaPredicted RBP6.22□□□□□ -1.41
SKP1-209ENST00000522552 ACIN1Q9UKV3 1341 aaKnown RBP6.22□□□□□ -1.41
SKP1-209ENST00000522552 KIF3CO14782 793 aa6.21□□□□□ -1.42
SKP1-209ENST00000522552 BRD1O95696 1058 aa6.21□□□□□ -1.42
SKP1-209ENST00000522552 GIGYF2Q6Y7W6 1299 aaKnown RBP6.21□□□□□ -1.42
SKP1-209ENST00000522552 FAM177A1Q8N128 213 aaPredicted RBP6.21□□□□□ -1.42
SKP1-209ENST00000522552 OXER1Q8TDS5 423 aa6.21□□□□□ -1.42
SKP1-209ENST00000522552 CCDC27Q2M243 656 aa6.2□□□□□ -1.42
SKP1-209ENST00000522552 DPYSL4O14531 572 aa6.2□□□□□ -1.42
SKP1-209ENST00000522552 DSG2Q14126 1118 aa6.2□□□□□ -1.42
SKP1-209ENST00000522552 PDIA6Q15084 440 aa6.2□□□□□ -1.42
SKP1-209ENST00000522552 NUTM2FA1L443 756 aa6.19□□□□□ -1.42
SKP1-209ENST00000522552 SPDYE5A6NIY4 337 aa6.19□□□□□ -1.42
SKP1-209ENST00000522552 GPHNQ9NQX3 736 aaPredicted RBP6.19□□□□□ -1.42
SKP1-209ENST00000522552 SPDYE16A6NNV3 312 aaPredicted RBP6.18□□□□□ -1.42
SKP1-209ENST00000522552 GNPATO15228 680 aa6.18□□□□□ -1.42
SKP1-209ENST00000522552 HOXB3P14651 431 aaPredicted RBP6.18□□□□□ -1.42
SKP1-209ENST00000522552 FECHP22830 423 aa6.18□□□□□ -1.42
SKP1-209ENST00000522552 REPIN1Q9BWE0 567 aaKnown RBP6.18□□□□□ -1.42
SKP1-209ENST00000522552 UNCXA6NJT0 531 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 ST18O60284 1047 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 PLPP6Q8IY26 295 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 SNPHO15079 494 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 SKIV2LQ15477 1246 aaKnown RBP6.17□□□□□ -1.42
SKP1-209ENST00000522552 PPP1R15BQ5SWA1 713 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 ZNF710Q8N1W2 664 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 IGSF5Q9NSI5 407 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 EMILIN3Q9NT22 766 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 MYT1LQ9UL68 1186 aa6.17□□□□□ -1.42
SKP1-209ENST00000522552 FOXK1P85037 733 aa6.16□□□□□ -1.42
SKP1-209ENST00000522552 PROCA1Q8NCQ7 364 aaPredicted RBP6.16□□□□□ -1.42
SKP1-209ENST00000522552 CALR3Q96L12 384 aaKnown RBP6.16□□□□□ -1.42
SKP1-209ENST00000522552 DOK7Q18PE1 504 aa6.15□□□□□ -1.42
SKP1-209ENST00000522552 SND1Q7KZF4 910 aaKnown RBP eCLIP6.15□□□□□ -1.422e-12■■□□□ 11.8
SKP1-209ENST00000522552 USTQ9Y2C2 406 aa6.15□□□□□ -1.42
SKP1-209ENST00000522552 IVNS1ABPQ9Y6Y0 642 aa6.15□□□□□ -1.42
SKP1-209ENST00000522552 HIC1Q14526 733 aa6.14□□□□□ -1.43
SKP1-209ENST00000522552 UPF1Q92900 1129 aaKnown RBP eCLIP6.14□□□□□ -1.43
SKP1-209ENST00000522552 KHSRPQ92945 711 aaKnown RBP eCLIP6.14□□□□□ -1.432e-7■■■□□ 16.3
SKP1-209ENST00000522552 MARVELD3Q96A59 401 aa6.14□□□□□ -1.43
SKP1-209ENST00000522552 SNRKQ9NRH2 765 aa6.14□□□□□ -1.43
SKP1-209ENST00000522552 PBXIP1Q96AQ6 731 aa6.14□□□□□ -1.43
SKP1-209ENST00000522552 ATP1B4Q9UN42 357 aaPredicted RBP6.14□□□□□ -1.43
SKP1-209ENST00000522552 RIMBP2O15034 1052 aa6.13□□□□□ -1.43
SKP1-209ENST00000522552 ARSIQ5FYB1 569 aa6.13□□□□□ -1.43
SKP1-209ENST00000522552 GLMNQ92990 594 aa6.13□□□□□ -1.43
SKP1-209ENST00000522552 CARNS1A5YM72 827 aa6.12□□□□□ -1.43
SKP1-209ENST00000522552 GRXCR2A6NFK2 248 aa6.12□□□□□ -1.43
SKP1-209ENST00000522552 CCDC125Q86Z20 511 aa6.12□□□□□ -1.43
SKP1-209ENST00000522552 FCHSD2O94868 740 aa6.11□□□□□ -1.43
SKP1-209ENST00000522552 BANK1Q8NDB2 785 aa6.11□□□□□ -1.43
SKP1-209ENST00000522552 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.11□□□□□ -1.43
SKP1-209ENST00000522552 GDPD2Q9HCC8 539 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms