RNA–Protein interactions for RNA: ENST00000522371.5

HDAC2-213, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-213ENST00000522371 MRPL50Q8N5N7 158 aaKnown RBP8.95□□□□□ -0.98
HDAC2-213ENST00000522371 CFAP44Q96MT7 982 aa8.95□□□□□ -0.98
HDAC2-213ENST00000522371 PLA2G2EQ9NZK7 142 aa8.95□□□□□ -0.98
HDAC2-213ENST00000522371 WDR70Q9NW82 654 aa8.93□□□□□ -0.98
HDAC2-213ENST00000522371 RABGEF1Q9UJ41 708 aa8.92□□□□□ -0.98
HDAC2-213ENST00000522371 SPDYE16A6NNV3 312 aaPredicted RBP8.9□□□□□ -0.98
HDAC2-213ENST00000522371 PTPN5P54829 565 aa8.9□□□□□ -0.98
HDAC2-213ENST00000522371 E2F4Q16254 413 aa8.9□□□□□ -0.98
HDAC2-213ENST00000522371 C6orf132Q5T0Z8 1188 aa8.9□□□□□ -0.98
HDAC2-213ENST00000522371 WNT2BQ93097 391 aa8.9□□□□□ -0.98
HDAC2-213ENST00000522371 ONECUT3O60422 494 aaPredicted RBP8.89□□□□□ -0.99
HDAC2-213ENST00000522371 COL9A1P20849 921 aa8.89□□□□□ -0.99
HDAC2-213ENST00000522371 THSD4Q6ZMP0 1018 aa8.89□□□□□ -0.99
HDAC2-213ENST00000522371 PDIA6Q15084 440 aa8.88□□□□□ -0.99
HDAC2-213ENST00000522371 DDX12PQ92771 950 aa8.88□□□□□ -0.99
HDAC2-213ENST00000522371 PROX2Q3B8N5 592 aa8.87□□□□□ -0.99
HDAC2-213ENST00000522371 LAPTM4BQ86VI4 370 aa8.86□□□□□ -0.99
HDAC2-213ENST00000522371 ARIH1Q9Y4X5 557 aaPredicted RBP8.86□□□□□ -0.99
HDAC2-213ENST00000522371 RBM33Q96EV2 1170 aaKnown RBP8.85□□□□□ -0.99
HDAC2-213ENST00000522371 NBR1Q14596 966 aa8.84□□□□□ -0.99
HDAC2-213ENST00000522371 ANKK1Q8NFD2 765 aa8.84□□□□□ -0.99
HDAC2-213ENST00000522371 KIAA1468Q9P260 1216 aa8.84□□□□□ -0.99
HDAC2-213ENST00000522371 EN1Q05925 392 aaPredicted RBP8.83□□□□□ -1
HDAC2-213ENST00000522371 TRIM6-TRIM34B2RNG4 842 aa8.82□□□□□ -1
HDAC2-213ENST00000522371 MAP3K7O43318 606 aa8.82□□□□□ -1
HDAC2-213ENST00000522371 IFFO2Q5TF58 517 aa8.81□□□□□ -1
HDAC2-213ENST00000522371 ZFRQ96KR1 1074 aaKnown RBP8.8□□□□□ -1
HDAC2-213ENST00000522371 PACS2Q86VP3 889 aa8.79□□□□□ -1
HDAC2-213ENST00000522371 CERKQ8TCT0 537 aa8.79□□□□□ -1
HDAC2-213ENST00000522371 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
HDAC2-213ENST00000522371 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
HDAC2-213ENST00000522371 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
HDAC2-213ENST00000522371 NYAP1Q6ZVC0 841 aa8.78□□□□□ -1
HDAC2-213ENST00000522371 TSR1Q2NL82 804 aaKnown RBP8.77□□□□□ -1.01
HDAC2-213ENST00000522371 SEPT9Q9UHD8 586 aaPredicted RBP8.76□□□□□ -1.01
HDAC2-213ENST00000522371 BCAMP50895 628 aa8.75□□□□□ -1.01
HDAC2-213ENST00000522371 TSKSQ9UJT2 592 aa8.74□□□□□ -1.01
HDAC2-213ENST00000522371 RGS20O76081 388 aa8.73□□□□□ -1.01
HDAC2-213ENST00000522371 PRSS12P56730 875 aa8.73□□□□□ -1.01
HDAC2-213ENST00000522371 CDCA7LQ96GN5 454 aa8.73□□□□□ -1.01
HDAC2-213ENST00000522371 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.73□□□□□ -1.01
HDAC2-213ENST00000522371 LRCH3Q96II8 777 aa8.72□□□□□ -1.01
HDAC2-213ENST00000522371 OSBPP22059 807 aa8.71□□□□□ -1.02
HDAC2-213ENST00000522371 ARHGEF1Q92888 912 aaKnown RBP8.71□□□□□ -1.02
HDAC2-213ENST00000522371 TSHZ2Q9NRE2 1034 aa8.71□□□□□ -1.02
HDAC2-213ENST00000522371 TSR3Q9UJK0 312 aaKnown RBP8.71□□□□□ -1.02
HDAC2-213ENST00000522371 ITGBL1O95965 494 aaPredicted RBP8.7□□□□□ -1.02
HDAC2-213ENST00000522371 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
HDAC2-213ENST00000522371 A0A0G2JS52 829 aa8.69□□□□□ -1.02
HDAC2-213ENST00000522371 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
HDAC2-213ENST00000522371 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
HDAC2-213ENST00000522371 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
HDAC2-213ENST00000522371 HPS5Q9UPZ3 1129 aa8.68□□□□□ -1.02
HDAC2-213ENST00000522371 HDGFP51858 240 aaKnown RBP8.67□□□□□ -1.02
HDAC2-213ENST00000522371 TATDN2Q93075 761 aa8.67□□□□□ -1.02
HDAC2-213ENST00000522371 PNMA3Q9UL41 463 aa8.67□□□□□ -1.02
HDAC2-213ENST00000522371 PPP4CP60510 307 aa8.66□□□□□ -1.02
HDAC2-213ENST00000522371 KCNC4Q03721 635 aa8.65□□□□□ -1.02
HDAC2-213ENST00000522371 CDHR5Q9HBB8 845 aa8.65□□□□□ -1.02
HDAC2-213ENST00000522371 FAM198AQ9UFP1 575 aa8.65□□□□□ -1.02
HDAC2-213ENST00000522371 SMAPO00193 183 aa8.64□□□□□ -1.03
HDAC2-213ENST00000522371 SAMD7Q7Z3H4 446 aa8.63□□□□□ -1.03
HDAC2-213ENST00000522371 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
HDAC2-213ENST00000522371 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
HDAC2-213ENST00000522371 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
HDAC2-213ENST00000522371 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
HDAC2-213ENST00000522371 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
HDAC2-213ENST00000522371 TTC13Q8NBP0 860 aa8.6□□□□□ -1.03
HDAC2-213ENST00000522371 C3orf80F5H4A9 247 aa8.59□□□□□ -1.03
HDAC2-213ENST00000522371 PADI6Q6TGC4 694 aa8.59□□□□□ -1.03
HDAC2-213ENST00000522371 MLLT3P42568 568 aaPredicted RBP8.58□□□□□ -1.04
HDAC2-213ENST00000522371 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
HDAC2-213ENST00000522371 RNF40O75150 1001 aa8.55□□□□□ -1.04
HDAC2-213ENST00000522371 SLF2Q8IX21 1173 aa8.55□□□□□ -1.04
HDAC2-213ENST00000522371 IRX2Q9BZI1 471 aaPredicted RBP8.55□□□□□ -1.04
HDAC2-213ENST00000522371 PTGDRQ13258 359 aa8.54□□□□□ -1.04
HDAC2-213ENST00000522371 TJAP1Q5JTD0 557 aa8.54□□□□□ -1.04
HDAC2-213ENST00000522371 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
HDAC2-213ENST00000522371 EYA1Q99502 592 aa8.53□□□□□ -1.04
HDAC2-213ENST00000522371 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
HDAC2-213ENST00000522371 SWT1Q5T5J6 900 aaKnown RBP8.52□□□□□ -1.05
HDAC2-213ENST00000522371 MTRQ99707 1265 aa8.52□□□□□ -1.05
HDAC2-213ENST00000522371 NUTM2FA1L443 756 aa8.51□□□□□ -1.05
HDAC2-213ENST00000522371 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
HDAC2-213ENST00000522371 PRR14Q9BWN1 585 aa8.5□□□□□ -1.05
HDAC2-213ENST00000522371 SEMA3EO15041 775 aa8.49□□□□□ -1.05
HDAC2-213ENST00000522371 DNAJB2P25686 324 aa8.49□□□□□ -1.05
HDAC2-213ENST00000522371 APLP1P51693 650 aa8.49□□□□□ -1.05
HDAC2-213ENST00000522371 FCHSD2O94868 740 aa8.48□□□□□ -1.05
HDAC2-213ENST00000522371 SMYD5Q6GMV2 418 aa8.48□□□□□ -1.05
HDAC2-213ENST00000522371 ADGRG1Q9Y653 693 aa8.46□□□□□ -1.06
HDAC2-213ENST00000522371 ZNF516Q92618 1163 aa8.45□□□□□ -1.06
HDAC2-213ENST00000522371 PPP1R18Q6NYC8 613 aa8.44□□□□□ -1.06
HDAC2-213ENST00000522371 TMEM134Q9H6X4 195 aa8.44□□□□□ -1.06
HDAC2-213ENST00000522371 TESPA1A2RU30 521 aaPredicted RBP8.43□□□□□ -1.06
HDAC2-213ENST00000522371 RCCD1A6NED2 376 aa8.43□□□□□ -1.06
HDAC2-213ENST00000522371 GGCXP38435 758 aa8.43□□□□□ -1.06
HDAC2-213ENST00000522371 HIC1Q14526 733 aa8.43□□□□□ -1.06
HDAC2-213ENST00000522371 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.43□□□□□ -1.06
HDAC2-213ENST00000522371 OATP04181 439 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms