RNA–Protein interactions for RNA: ENST00000522178.1

VDAC3-210, Transcript of voltage dependent anion channel 3, humanhuman

TSL 3

Gene VDAC3, Length 272 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-210ENST00000522178 CDHR5Q9HBB8 845 aa13.42□□□□□ -0.26
VDAC3-210ENST00000522178 NPDC1Q9NQX5 325 aaPredicted RBP13.42□□□□□ -0.26
VDAC3-210ENST00000522178 FECHP22830 423 aa13.41□□□□□ -0.26
VDAC3-210ENST00000522178 ZNF454Q8N9F8 522 aa13.41□□□□□ -0.26
VDAC3-210ENST00000522178 CERKQ8TCT0 537 aa13.41□□□□□ -0.26
VDAC3-210ENST00000522178 KHSRPQ92945 711 aaKnown RBP eCLIP13.41□□□□□ -0.26
VDAC3-210ENST00000522178 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
VDAC3-210ENST00000522178 AMHR2Q16671 573 aa13.39□□□□□ -0.27
VDAC3-210ENST00000522178 TSR1Q2NL82 804 aaKnown RBP13.39□□□□□ -0.27
VDAC3-210ENST00000522178 C6orf132Q5T0Z8 1188 aa13.37□□□□□ -0.27
VDAC3-210ENST00000522178 KDM4CQ9H3R0 1056 aa13.36□□□□□ -0.27
VDAC3-210ENST00000522178 GPBP1L1Q9HC44 474 aaPredicted RBP13.36□□□□□ -0.27
VDAC3-210ENST00000522178 LHX6Q9UPM6 363 aa13.34□□□□□ -0.27
VDAC3-210ENST00000522178 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
VDAC3-210ENST00000522178 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
VDAC3-210ENST00000522178 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
VDAC3-210ENST00000522178 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.28
VDAC3-210ENST00000522178 RBM27Q9P2N5 1060 aaKnown RBP13.33□□□□□ -0.28
VDAC3-210ENST00000522178 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
VDAC3-210ENST00000522178 PARP9Q8IXQ6 854 aa13.28□□□□□ -0.28
VDAC3-210ENST00000522178 BCL2L12Q9HB09 334 aa13.28□□□□□ -0.28
VDAC3-210ENST00000522178 OATP04181 439 aa13.25□□□□□ -0.29
VDAC3-210ENST00000522178 LHX8Q68G74 356 aa13.25□□□□□ -0.29
VDAC3-210ENST00000522178 PADI6Q6TGC4 694 aa13.25□□□□□ -0.29
VDAC3-210ENST00000522178 TTC13Q8NBP0 860 aa13.25□□□□□ -0.29
VDAC3-210ENST00000522178 PRSS12P56730 875 aa13.24□□□□□ -0.29
VDAC3-210ENST00000522178 TTLL12Q14166 644 aaPredicted RBP13.24□□□□□ -0.29
VDAC3-210ENST00000522178 PTPREP23469 700 aa13.23□□□□□ -0.29
VDAC3-210ENST00000522178 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
VDAC3-210ENST00000522178 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
VDAC3-210ENST00000522178 IL27Q8NEV9 243 aa13.22□□□□□ -0.29
VDAC3-210ENST00000522178 PPP1R3GB7ZBB8 358 aa13.21□□□□□ -0.29
VDAC3-210ENST00000522178 CLCN1P35523 988 aa13.21□□□□□ -0.29
VDAC3-210ENST00000522178 CDCA7LQ96GN5 454 aa13.21□□□□□ -0.29
VDAC3-210ENST00000522178 ADGRG1Q9Y653 693 aa13.2□□□□□ -0.3
VDAC3-210ENST00000522178 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
VDAC3-210ENST00000522178 FAM117AQ9C073 453 aa13.19□□□□□ -0.3
VDAC3-210ENST00000522178 GIGYF2Q6Y7W6 1299 aaKnown RBP13.18□□□□□ -0.3
VDAC3-210ENST00000522178 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
VDAC3-210ENST00000522178 TMUB1Q9BVT8 246 aa13.18□□□□□ -0.3
VDAC3-210ENST00000522178 GPCPD1Q9NPB8 672 aa13.18□□□□□ -0.3
VDAC3-210ENST00000522178 COL9A1P20849 921 aa13.17□□□□□ -0.3
VDAC3-210ENST00000522178 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
VDAC3-210ENST00000522178 PHOX2BQ99453 314 aa13.16□□□□□ -0.3
VDAC3-210ENST00000522178 KCNH8Q96L42 1107 aa13.15□□□□□ -0.3
VDAC3-210ENST00000522178 MDM2Q00987 491 aaPredicted RBP13.14□□□□□ -0.31
VDAC3-210ENST00000522178 REPIN1Q9BWE0 567 aaKnown RBP13.14□□□□□ -0.31
VDAC3-210ENST00000522178 FAM161AQ3B820 660 aa13.13□□□□□ -0.31
VDAC3-210ENST00000522178 PLEKHG3A1L390 1219 aa13.12□□□□□ -0.31
VDAC3-210ENST00000522178 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
VDAC3-210ENST00000522178 MS4A1P11836 297 aa13.11□□□□□ -0.31
VDAC3-210ENST00000522178 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
VDAC3-210ENST00000522178 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
VDAC3-210ENST00000522178 TSKSQ9UJT2 592 aa13.1□□□□□ -0.31
VDAC3-210ENST00000522178 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
VDAC3-210ENST00000522178 GOPCQ9HD26 462 aa13.09□□□□□ -0.31
VDAC3-210ENST00000522178 ERBB3P21860 1342 aa13.09□□□□□ -0.31
VDAC3-210ENST00000522178 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
VDAC3-210ENST00000522178 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
VDAC3-210ENST00000522178 PACS2Q86VP3 889 aa13.08□□□□□ -0.32
VDAC3-210ENST00000522178 KCNK17Q96T54 332 aa13.07□□□□□ -0.32
VDAC3-210ENST00000522178 EYA1Q99502 592 aa13.07□□□□□ -0.32
VDAC3-210ENST00000522178 FAM217BQ9NTX9 383 aaPredicted RBP13.07□□□□□ -0.32
VDAC3-210ENST00000522178 ST18O60284 1047 aa13.06□□□□□ -0.32
VDAC3-210ENST00000522178 TIMELESSQ9UNS1 1208 aa13.05□□□□□ -0.32
VDAC3-210ENST00000522178 VARS2Q5ST30 1063 aaKnown RBP13.04□□□□□ -0.32
VDAC3-210ENST00000522178 NUDT18Q6ZVK8 323 aa13.04□□□□□ -0.32
VDAC3-210ENST00000522178 TATDN2Q93075 761 aa13.04□□□□□ -0.32
VDAC3-210ENST00000522178 RCCD1A6NED2 376 aa13.03□□□□□ -0.32
VDAC3-210ENST00000522178 ARHGAP33O14559 1287 aa13.03□□□□□ -0.32
VDAC3-210ENST00000522178 PNMA3Q9UL41 463 aa13.03□□□□□ -0.32
VDAC3-210ENST00000522178 DNAJB2P25686 324 aa13.02□□□□□ -0.33
VDAC3-210ENST00000522178 PBX2P40425 430 aa13.02□□□□□ -0.33
VDAC3-210ENST00000522178 EMP3P54852 163 aa13.02□□□□□ -0.33
VDAC3-210ENST00000522178 NLRP7Q8WX94 980 aa13.02□□□□□ -0.33
VDAC3-210ENST00000522178 ZBED2Q9BTP6 218 aa13.02□□□□□ -0.33
VDAC3-210ENST00000522178 SLC4A5Q9BY07 1137 aa13.02□□□□□ -0.33
VDAC3-210ENST00000522178 PROX2Q3B8N5 592 aa13.01□□□□□ -0.33
VDAC3-210ENST00000522178 BEGAINQ9BUH8 593 aa13□□□□□ -0.33
VDAC3-210ENST00000522178 RSPH6AQ9H0K4 717 aa13□□□□□ -0.33
VDAC3-210ENST00000522178 PSEN2P49810 448 aa12.98□□□□□ -0.33
VDAC3-210ENST00000522178 SH3D19Q5HYK7 790 aa12.98□□□□□ -0.33
VDAC3-210ENST00000522178 ZNF687Q8N1G0 1237 aa12.98□□□□□ -0.33
VDAC3-210ENST00000522178 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
VDAC3-210ENST00000522178 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
VDAC3-210ENST00000522178 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
VDAC3-210ENST00000522178 KIAA1468Q9P260 1216 aa12.97□□□□□ -0.33
VDAC3-210ENST00000522178 DIXDC1Q155Q3 683 aa12.96□□□□□ -0.33
VDAC3-210ENST00000522178 PCMTD1Q96MG8 357 aaPredicted RBP12.96□□□□□ -0.33
VDAC3-210ENST00000522178 TMEM134Q9H6X4 195 aa12.96□□□□□ -0.33
VDAC3-210ENST00000522178 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.33
VDAC3-210ENST00000522178 POTEEQ6S8J3 1075 aa12.95□□□□□ -0.34
VDAC3-210ENST00000522178 SKIV2LQ15477 1246 aaKnown RBP12.94□□□□□ -0.34
VDAC3-210ENST00000522178 MARVELD3Q96A59 401 aa12.94□□□□□ -0.34
VDAC3-210ENST00000522178 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
VDAC3-210ENST00000522178 SMAPO00193 183 aa12.91□□□□□ -0.34
VDAC3-210ENST00000522178 CD46P15529 392 aa12.91□□□□□ -0.34
VDAC3-210ENST00000522178 DMRTA1Q5VZB9 504 aa12.91□□□□□ -0.34
VDAC3-210ENST00000522178 FAM163AQ96GL9 167 aaPredicted RBP12.91□□□□□ -0.34
VDAC3-210ENST00000522178 AXIN2Q9Y2T1 843 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms