RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 RABGEF1Q9UJ41 708 aa10.77□□□□□ -0.69
HDAC2-208ENST00000520746 DPYSL4O14531 572 aa10.75□□□□□ -0.69
HDAC2-208ENST00000520746 ANKK1Q8NFD2 765 aa10.72□□□□□ -0.69
HDAC2-208ENST00000520746 EPAS1Q99814 870 aa10.72□□□□□ -0.69
HDAC2-208ENST00000520746 A0A0G2JS52 829 aa10.71□□□□□ -0.69
HDAC2-208ENST00000520746 C6orf132Q5T0Z8 1188 aa10.7□□□□□ -0.7
HDAC2-208ENST00000520746 KIAA1468Q9P260 1216 aa10.7□□□□□ -0.7
HDAC2-208ENST00000520746 BCAMP50895 628 aa10.69□□□□□ -0.7
HDAC2-208ENST00000520746 LAPTM4BQ86VI4 370 aa10.69□□□□□ -0.7
HDAC2-208ENST00000520746 RGS20O76081 388 aa10.68□□□□□ -0.7
HDAC2-208ENST00000520746 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
HDAC2-208ENST00000520746 ONECUT3O60422 494 aaPredicted RBP10.67□□□□□ -0.7
HDAC2-208ENST00000520746 DDX12PQ92771 950 aa10.67□□□□□ -0.7
HDAC2-208ENST00000520746 RBM33Q96EV2 1170 aaKnown RBP10.67□□□□□ -0.7
HDAC2-208ENST00000520746 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
HDAC2-208ENST00000520746 ZFRQ96KR1 1074 aaKnown RBP10.66□□□□□ -0.7
HDAC2-208ENST00000520746 SEPT9Q9UHD8 586 aaPredicted RBP10.66□□□□□ -0.7
HDAC2-208ENST00000520746 TRIM6-TRIM34B2RNG4 842 aa10.65□□□□□ -0.7
HDAC2-208ENST00000520746 ITGBL1O95965 494 aaPredicted RBP10.64□□□□□ -0.71
HDAC2-208ENST00000520746 PDIA6Q15084 440 aa10.62□□□□□ -0.71
HDAC2-208ENST00000520746 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
HDAC2-208ENST00000520746 NBR1Q14596 966 aa10.61□□□□□ -0.71
HDAC2-208ENST00000520746 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
HDAC2-208ENST00000520746 FAM98CQ17RN3 349 aaKnown RBP10.6□□□□□ -0.71
HDAC2-208ENST00000520746 TSR1Q2NL82 804 aaKnown RBP10.59□□□□□ -0.71
HDAC2-208ENST00000520746 NYAP1Q6ZVC0 841 aa10.59□□□□□ -0.71
HDAC2-208ENST00000520746 MAP3K7O43318 606 aa10.58□□□□□ -0.72
HDAC2-208ENST00000520746 TSKSQ9UJT2 592 aa10.58□□□□□ -0.72
HDAC2-208ENST00000520746 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
HDAC2-208ENST00000520746 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
HDAC2-208ENST00000520746 IRX2Q9BZI1 471 aaPredicted RBP10.56□□□□□ -0.72
HDAC2-208ENST00000520746 LRCH3Q96II8 777 aa10.55□□□□□ -0.72
HDAC2-208ENST00000520746 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.55□□□□□ -0.72
HDAC2-208ENST00000520746 TSR3Q9UJK0 312 aaKnown RBP10.54□□□□□ -0.72
HDAC2-208ENST00000520746 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
HDAC2-208ENST00000520746 PRIM1P49642 420 aaKnown RBP10.53□□□□□ -0.72
HDAC2-208ENST00000520746 PACS2Q86VP3 889 aa10.53□□□□□ -0.72
HDAC2-208ENST00000520746 KCNC4Q03721 635 aa10.52□□□□□ -0.73
HDAC2-208ENST00000520746 E2F4Q16254 413 aa10.52□□□□□ -0.73
HDAC2-208ENST00000520746 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.51□□□□□ -0.73
HDAC2-208ENST00000520746 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
HDAC2-208ENST00000520746 FAM198AQ9UFP1 575 aa10.5□□□□□ -0.73
HDAC2-208ENST00000520746 ARIH1Q9Y4X5 557 aaPredicted RBP10.5□□□□□ -0.73
HDAC2-208ENST00000520746 SMAPO00193 183 aa10.48□□□□□ -0.73
HDAC2-208ENST00000520746 PRSS12P56730 875 aa10.48□□□□□ -0.73
HDAC2-208ENST00000520746 GRXCR2A6NFK2 248 aa10.47□□□□□ -0.73
HDAC2-208ENST00000520746 C3orf80F5H4A9 247 aa10.47□□□□□ -0.73
HDAC2-208ENST00000520746 PAXIP1Q6ZW49 1069 aaPredicted RBP10.46□□□□□ -0.73
HDAC2-208ENST00000520746 SAMD7Q7Z3H4 446 aa10.45□□□□□ -0.74
HDAC2-208ENST00000520746 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
HDAC2-208ENST00000520746 CFAP44Q96MT7 982 aa10.45□□□□□ -0.74
HDAC2-208ENST00000520746 CDHR5Q9HBB8 845 aa10.45□□□□□ -0.74
HDAC2-208ENST00000520746 WDR70Q9NW82 654 aa10.45□□□□□ -0.74
HDAC2-208ENST00000520746 PPP4CP60510 307 aa10.44□□□□□ -0.74
HDAC2-208ENST00000520746 NBPF26B4DH59 902 aa10.43□□□□□ -0.74
HDAC2-208ENST00000520746 OSBPP22059 807 aa10.43□□□□□ -0.74
HDAC2-208ENST00000520746 AMER1Q5JTC6 1135 aaPredicted RBP10.43□□□□□ -0.74
HDAC2-208ENST00000520746 TATDN2Q93075 761 aa10.43□□□□□ -0.74
HDAC2-208ENST00000520746 PNMA3Q9UL41 463 aa10.42□□□□□ -0.74
HDAC2-208ENST00000520746 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
HDAC2-208ENST00000520746 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.74
HDAC2-208ENST00000520746 RBM27Q9P2N5 1060 aaKnown RBP10.38□□□□□ -0.75
HDAC2-208ENST00000520746 NUDT18Q6ZVK8 323 aa10.37□□□□□ -0.75
HDAC2-208ENST00000520746 MTRQ99707 1265 aa10.36□□□□□ -0.75
HDAC2-208ENST00000520746 Q6ZNB5 142 aa10.35□□□□□ -0.75
HDAC2-208ENST00000520746 RNF40O75150 1001 aa10.34□□□□□ -0.75
HDAC2-208ENST00000520746 TTC13Q8NBP0 860 aa10.34□□□□□ -0.75
HDAC2-208ENST00000520746 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
HDAC2-208ENST00000520746 PADI6Q6TGC4 694 aa10.33□□□□□ -0.76
HDAC2-208ENST00000520746 IL21Q9HBE4 155 aa10.33□□□□□ -0.76
HDAC2-208ENST00000520746 APLP1P51693 650 aa10.32□□□□□ -0.76
HDAC2-208ENST00000520746 ZNF516Q92618 1163 aa10.31□□□□□ -0.76
HDAC2-208ENST00000520746 HDGFP51858 240 aaKnown RBP10.3□□□□□ -0.76
HDAC2-208ENST00000520746 SWT1Q5T5J6 900 aaKnown RBP10.29□□□□□ -0.76
HDAC2-208ENST00000520746 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
HDAC2-208ENST00000520746 PRKD2Q9BZL6 878 aa10.28□□□□□ -0.76
HDAC2-208ENST00000520746 LAPTM4AQ15012 233 aa10.27□□□□□ -0.77
HDAC2-208ENST00000520746 LCE2BO14633 110 aa10.26□□□□□ -0.77
HDAC2-208ENST00000520746 GFRA3O60609 400 aa10.25□□□□□ -0.77
HDAC2-208ENST00000520746 MLLT3P42568 568 aaPredicted RBP10.25□□□□□ -0.77
HDAC2-208ENST00000520746 SLF2Q8IX21 1173 aa10.25□□□□□ -0.77
HDAC2-208ENST00000520746 NKX2-3Q8TAU0 364 aa10.25□□□□□ -0.77
HDAC2-208ENST00000520746 EYA1Q99502 592 aa10.25□□□□□ -0.77
HDAC2-208ENST00000520746 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
HDAC2-208ENST00000520746 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
HDAC2-208ENST00000520746 V9GY48 417 aaPredicted RBP10.23□□□□□ -0.77
HDAC2-208ENST00000520746 COPS2P61201 443 aa10.22□□□□□ -0.77
HDAC2-208ENST00000520746 KCNV2Q8TDN2 545 aa10.22□□□□□ -0.77
HDAC2-208ENST00000520746 ARHGEF1Q92888 912 aaKnown RBP10.22□□□□□ -0.77
HDAC2-208ENST00000520746 TSHZ2Q9NRE2 1034 aa10.22□□□□□ -0.77
HDAC2-208ENST00000520746 NRG2O14511 850 aaPredicted RBP10.19□□□□□ -0.78
HDAC2-208ENST00000520746 PTGDRQ13258 359 aa10.18□□□□□ -0.78
HDAC2-208ENST00000520746 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
HDAC2-208ENST00000520746 ZPR1O75312 459 aa10.17□□□□□ -0.78
HDAC2-208ENST00000520746 SLC4A3P48751 1232 aa10.17□□□□□ -0.78
HDAC2-208ENST00000520746 DNAJB2P25686 324 aa10.15□□□□□ -0.78
HDAC2-208ENST00000520746 GGCXP38435 758 aa10.15□□□□□ -0.78
HDAC2-208ENST00000520746 PRR14Q9BWN1 585 aa10.15□□□□□ -0.78
HDAC2-208ENST00000520746 PCDHB3Q9Y5E6 796 aa10.15□□□□□ -0.78
HDAC2-208ENST00000520746 BLOC1S3Q6QNY0 202 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms