RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 C9orf84Q5VXU9 1444 aa14.12□□□□□ -0.15
SPARC-202ENST00000520687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.11□□□□□ -0.15
SPARC-202ENST00000520687 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
SPARC-202ENST00000520687 ANKRD50Q9ULJ7 1429 aa14.11□□□□□ -0.15
SPARC-202ENST00000520687 KIAA1107Q9UPP5 1409 aa14.11□□□□□ -0.15
SPARC-202ENST00000520687 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
SPARC-202ENST00000520687 CCDC141Q6ZP82 1450 aa14.09□□□□□ -0.15
SPARC-202ENST00000520687 MBD5Q9P267 1494 aa14.09□□□□□ -0.15
SPARC-202ENST00000520687 SAMD9LQ8IVG5 1584 aa14.08□□□□□ -0.16
SPARC-202ENST00000520687 RICTORQ6R327 1708 aa14.07□□□□□ -0.16
SPARC-202ENST00000520687 MLECQ14165 292 aa14.07□□□□□ -0.16
SPARC-202ENST00000520687 PZPP20742 1482 aa14.07□□□□□ -0.16
SPARC-202ENST00000520687 ZFYVE16Q7Z3T8 1539 aa14.06□□□□□ -0.16
SPARC-202ENST00000520687 KDM5DQ9BY66 1539 aa14.06□□□□□ -0.16
SPARC-202ENST00000520687 ARHGEF12Q9NZN5 1544 aa14.06□□□□□ -0.16
SPARC-202ENST00000520687 MAST1Q9Y2H9 1570 aa14.06□□□□□ -0.16
SPARC-202ENST00000520687 ZMYM4Q5VZL5 1548 aa14.05□□□□□ -0.16
SPARC-202ENST00000520687 SETD1BQ9UPS6 1966 aaKnown RBP14.05□□□□□ -0.16
SPARC-202ENST00000520687 PLCH2O75038 1416 aa14.04□□□□□ -0.16
SPARC-202ENST00000520687 MAGI2Q86UL8 1455 aa14.04□□□□□ -0.16
SPARC-202ENST00000520687 ARHGAP5Q13017 1502 aa14.04□□□□□ -0.16
SPARC-202ENST00000520687 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
SPARC-202ENST00000520687 HSPA1LP34931 641 aa14.04□□□□□ -0.16
SPARC-202ENST00000520687 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
SPARC-202ENST00000520687 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
SPARC-202ENST00000520687 HNRNPMP52272 730 aaKnown RBP eCLIP14.03□□□□□ -0.16
SPARC-202ENST00000520687 L3MBTL2Q969R5 705 aa14.02□□□□□ -0.16
SPARC-202ENST00000520687 CEBPAP49715 358 aaPredicted RBP14.01□□□□□ -0.17
SPARC-202ENST00000520687 NUP155O75694 1391 aa14.01□□□□□ -0.17
SPARC-202ENST00000520687 EIF4G2P78344 907 aaKnown RBP eCLIP14□□□□□ -0.17
SPARC-202ENST00000520687 CFAP74Q9C0B2 1584 aa14□□□□□ -0.17
SPARC-202ENST00000520687 SYCP2Q9BX26 1530 aa13.99□□□□□ -0.17
SPARC-202ENST00000520687 PKD2Q13563 968 aa13.99□□□□□ -0.17
SPARC-202ENST00000520687 PLXNC1O60486 1568 aa13.98□□□□□ -0.17
SPARC-202ENST00000520687 ABCC1P33527 1531 aa13.98□□□□□ -0.17
SPARC-202ENST00000520687 CCER2I3L3R5 266 aa13.98□□□□□ -0.17
SPARC-202ENST00000520687 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
SPARC-202ENST00000520687 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
SPARC-202ENST00000520687 FOXD1Q16676 465 aa13.96□□□□□ -0.18
SPARC-202ENST00000520687 RTEL1-TNFRSF6BF6WH68 1400 aa13.95□□□□□ -0.18
SPARC-202ENST00000520687 DUOX2Q9NRD8 1548 aa13.95□□□□□ -0.18
SPARC-202ENST00000520687 ANP32CO43423 234 aa13.95□□□□□ -0.18
SPARC-202ENST00000520687 TOM1O60784 492 aa13.95□□□□□ -0.18
SPARC-202ENST00000520687 PIP4K2BP78356 416 aa13.94□□□□□ -0.18
SPARC-202ENST00000520687 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
SPARC-202ENST00000520687 HSPA5P11021 654 aaKnown RBP13.93□□□□□ -0.18
SPARC-202ENST00000520687 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
SPARC-202ENST00000520687 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
SPARC-202ENST00000520687 GTF3C3Q9Y5Q9 886 aa13.92□□□□□ -0.18
SPARC-202ENST00000520687 ATP10AO60312 1499 aa13.92□□□□□ -0.18
SPARC-202ENST00000520687 TRAPPC8Q9Y2L5 1435 aa13.91□□□□□ -0.18
SPARC-202ENST00000520687 UNC13BO14795 1591 aa13.91□□□□□ -0.18
SPARC-202ENST00000520687 CAMSAP1Q5T5Y3 1602 aa13.9□□□□□ -0.18
SPARC-202ENST00000520687 FAM135AQ9P2D6 1515 aa13.9□□□□□ -0.19
SPARC-202ENST00000520687 C3P01024 1663 aa13.89□□□□□ -0.19
SPARC-202ENST00000520687 NBPF8Q3BBV2 869 aa13.88□□□□□ -0.19
SPARC-202ENST00000520687 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
SPARC-202ENST00000520687 INO80Q9ULG1 1556 aaPredicted RBP13.87□□□□□ -0.19
SPARC-202ENST00000520687 SPAG9O60271 1321 aaKnown RBP13.87□□□□□ -0.19
SPARC-202ENST00000520687 IQGAP3Q86VI3 1631 aa13.85□□□□□ -0.19
SPARC-202ENST00000520687 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
SPARC-202ENST00000520687 ESF1Q9H501 851 aaKnown RBP13.85□□□□□ -0.19
SPARC-202ENST00000520687 WASHC2AQ641Q2 1341 aa13.84□□□□□ -0.19
SPARC-202ENST00000520687 CCDC7Q96M83 1385 aa13.84□□□□□ -0.19
SPARC-202ENST00000520687 STAC3Q96MF2 364 aa13.83□□□□□ -0.19
SPARC-202ENST00000520687 CCDC144AA2RUR9 1427 aa13.83□□□□□ -0.19
SPARC-202ENST00000520687 RALGAPBQ86X10 1494 aa13.83□□□□□ -0.19
SPARC-202ENST00000520687 CPS1P31327 1500 aa13.83□□□□□ -0.2
SPARC-202ENST00000520687 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
SPARC-202ENST00000520687 NCKAP5LQ9HCH0 1330 aa13.83□□□□□ -0.2
SPARC-202ENST00000520687 RGS17Q9UGC6 210 aaPredicted RBP13.83□□□□□ -0.2
SPARC-202ENST00000520687 CNTLNQ9NXG0 1405 aa13.82□□□□□ -0.2
SPARC-202ENST00000520687 ATP7AQ04656 1500 aa13.81□□□□□ -0.2
SPARC-202ENST00000520687 EIF2AK4Q9P2K8 1649 aaKnown RBP13.81□□□□□ -0.2
SPARC-202ENST00000520687 PPP6R1Q9UPN7 881 aa13.79□□□□□ -0.2
SPARC-202ENST00000520687 ZNF518AQ6AHZ1 1483 aa13.79□□□□□ -0.2
SPARC-202ENST00000520687 NPATQ14207 1427 aa13.79□□□□□ -0.2
SPARC-202ENST00000520687 SCAPERQ9BY12 1400 aa13.79□□□□□ -0.2
SPARC-202ENST00000520687 ROCK2O75116 1388 aaKnown RBP13.79□□□□□ -0.2
SPARC-202ENST00000520687 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
SPARC-202ENST00000520687 KDM5CP41229 1560 aa13.79□□□□□ -0.2
SPARC-202ENST00000520687 KANK1Q14678 1352 aa13.78□□□□□ -0.2
SPARC-202ENST00000520687 USP47Q96K76 1375 aa13.78□□□□□ -0.2
SPARC-202ENST00000520687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.77□□□□□ -0.21
SPARC-202ENST00000520687 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.21
SPARC-202ENST00000520687 KIDINS220Q9ULH0 1771 aa13.76□□□□□ -0.21
SPARC-202ENST00000520687 AFAP1Q8N556 730 aa13.76□□□□□ -0.21
SPARC-202ENST00000520687 REREQ9P2R6 1566 aa13.76□□□□□ -0.21
SPARC-202ENST00000520687 AGLP35573 1532 aa13.76□□□□□ -0.21
SPARC-202ENST00000520687 KIF7Q2M1P5 1343 aa13.76□□□□□ -0.21
SPARC-202ENST00000520687 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
SPARC-202ENST00000520687 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
SPARC-202ENST00000520687 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
SPARC-202ENST00000520687 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
SPARC-202ENST00000520687 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
SPARC-202ENST00000520687 GPRASP1Q5JY77 1395 aa13.73□□□□□ -0.21
SPARC-202ENST00000520687 MLH3Q9UHC1 1453 aa13.72□□□□□ -0.21
SPARC-202ENST00000520687 C11orf95C9JLR9 678 aaPredicted RBP13.72□□□□□ -0.21
SPARC-202ENST00000520687 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
SPARC-202ENST00000520687 POTEAQ6S8J7 498 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms