RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
NPM1-206ENST00000519955 MAP3K7O43318 606 aa12.04□□□□□ -0.48
NPM1-206ENST00000519955 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
NPM1-206ENST00000519955 LHX6Q9UPM6 363 aa12.04□□□□□ -0.48
NPM1-206ENST00000519955 GPR37O15354 613 aa12.03□□□□□ -0.48
NPM1-206ENST00000519955 FCHSD2O94868 740 aa12.03□□□□□ -0.48
NPM1-206ENST00000519955 ZDHHC16Q969W1 377 aa12.03□□□□□ -0.48
NPM1-206ENST00000519955 FAM205CA6NFA0 338 aa12.02□□□□□ -0.49
NPM1-206ENST00000519955 RBM33Q96EV2 1170 aaKnown RBP12.02□□□□□ -0.49
NPM1-206ENST00000519955 PPP4R3BQ5MIZ7 849 aa12□□□□□ -0.49
NPM1-206ENST00000519955 PTGDRQ13258 359 aa11.99□□□□□ -0.49
NPM1-206ENST00000519955 HIC1Q14526 733 aa11.99□□□□□ -0.49
NPM1-206ENST00000519955 GNPATO15228 680 aa11.97□□□□□ -0.49
NPM1-206ENST00000519955 KRI1Q8N9T8 703 aaKnown RBP11.97□□□□□ -0.49
NPM1-206ENST00000519955 SLC24A3Q9HC58 644 aa11.97□□□□□ -0.49
NPM1-206ENST00000519955 TSR1Q2NL82 804 aaKnown RBP11.96□□□□□ -0.49
NPM1-206ENST00000519955 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
NPM1-206ENST00000519955 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
NPM1-206ENST00000519955 CDHR5Q9HBB8 845 aa11.96□□□□□ -0.49
NPM1-206ENST00000519955 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
NPM1-206ENST00000519955 NPDC1Q9NQX5 325 aaPredicted RBP11.94□□□□□ -0.5
NPM1-206ENST00000519955 AK7Q96M32 723 aa11.93□□□□□ -0.5
NPM1-206ENST00000519955 BCL2L12Q9HB09 334 aa11.93□□□□□ -0.5
NPM1-206ENST00000519955 MINK1Q8N4C8 1332 aaPredicted RBP11.92□□□□□ -0.5
NPM1-206ENST00000519955 MAP2K5Q13163 448 aa11.92□□□□□ -0.5
NPM1-206ENST00000519955 ERBB3P21860 1342 aa11.89□□□□□ -0.51
NPM1-206ENST00000519955 PTPREP23469 700 aa11.89□□□□□ -0.51
NPM1-206ENST00000519955 IRF6O14896 467 aa11.87□□□□□ -0.51
NPM1-206ENST00000519955 FECHP22830 423 aa11.87□□□□□ -0.51
NPM1-206ENST00000519955 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
NPM1-206ENST00000519955 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
NPM1-206ENST00000519955 KCNH8Q96L42 1107 aa11.85□□□□□ -0.51
NPM1-206ENST00000519955 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
NPM1-206ENST00000519955 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
NPM1-206ENST00000519955 TRIM66O15016 1216 aa11.82□□□□□ -0.52
NPM1-206ENST00000519955 COL9A1P20849 921 aa11.82□□□□□ -0.52
NPM1-206ENST00000519955 PRSS12P56730 875 aa11.82□□□□□ -0.52
NPM1-206ENST00000519955 PADI6Q6TGC4 694 aa11.81□□□□□ -0.52
NPM1-206ENST00000519955 KCNK17Q96T54 332 aa11.81□□□□□ -0.52
NPM1-206ENST00000519955 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
NPM1-206ENST00000519955 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
NPM1-206ENST00000519955 BRPF1P55201 1214 aaPredicted RBP11.79□□□□□ -0.52
NPM1-206ENST00000519955 PBX2P40425 430 aa11.78□□□□□ -0.52
NPM1-206ENST00000519955 NEUROD2Q15784 382 aa11.78□□□□□ -0.52
NPM1-206ENST00000519955 ARHGAP33O14559 1287 aa11.77□□□□□ -0.53
NPM1-206ENST00000519955 ZNF687Q8N1G0 1237 aa11.77□□□□□ -0.53
NPM1-206ENST00000519955 OATP04181 439 aa11.76□□□□□ -0.53
NPM1-206ENST00000519955 PDE4DQ08499 809 aa11.76□□□□□ -0.53
NPM1-206ENST00000519955 AMHR2Q16671 573 aa11.76□□□□□ -0.53
NPM1-206ENST00000519955 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
NPM1-206ENST00000519955 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
NPM1-206ENST00000519955 ONECUT3O60422 494 aaPredicted RBP11.74□□□□□ -0.53
NPM1-206ENST00000519955 PSEN2P49810 448 aa11.74□□□□□ -0.53
NPM1-206ENST00000519955 POTEEQ6S8J3 1075 aa11.72□□□□□ -0.53
NPM1-206ENST00000519955 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
NPM1-206ENST00000519955 RNF166Q96A37 237 aaPredicted RBP11.72□□□□□ -0.53
NPM1-206ENST00000519955 ZBED2Q9BTP6 218 aa11.72□□□□□ -0.53
NPM1-206ENST00000519955 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
NPM1-206ENST00000519955 METTL3Q86U44 580 aaKnown RBP11.71□□□□□ -0.53
NPM1-206ENST00000519955 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
NPM1-206ENST00000519955 SLC4A5Q9BY07 1137 aa11.71□□□□□ -0.53
NPM1-206ENST00000519955 FAM198AQ9UFP1 575 aa11.71□□□□□ -0.53
NPM1-206ENST00000519955 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
NPM1-206ENST00000519955 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
NPM1-206ENST00000519955 PXYLP1Q8TE99 480 aa11.7□□□□□ -0.54
NPM1-206ENST00000519955 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
NPM1-206ENST00000519955 PROX2Q3B8N5 592 aa11.69□□□□□ -0.54
NPM1-206ENST00000519955 GPBP1L1Q9HC44 474 aaPredicted RBP11.68□□□□□ -0.54
NPM1-206ENST00000519955 TTLL12Q14166 644 aaPredicted RBP11.67□□□□□ -0.54
NPM1-206ENST00000519955 DMRTA1Q5VZB9 504 aa11.67□□□□□ -0.54
NPM1-206ENST00000519955 PARP9Q8IXQ6 854 aa11.67□□□□□ -0.54
NPM1-206ENST00000519955 PHOX2BQ99453 314 aa11.67□□□□□ -0.54
NPM1-206ENST00000519955 KDM4CQ9H3R0 1056 aa11.67□□□□□ -0.54
NPM1-206ENST00000519955 CLCN1P35523 988 aa11.66□□□□□ -0.54
NPM1-206ENST00000519955 TATDN2Q93075 761 aa11.66□□□□□ -0.54
NPM1-206ENST00000519955 EYA1Q99502 592 aa11.66□□□□□ -0.54
NPM1-206ENST00000519955 PNMA3Q9UL41 463 aa11.66□□□□□ -0.54
NPM1-206ENST00000519955 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
NPM1-206ENST00000519955 KIAA1468Q9P260 1216 aa11.65□□□□□ -0.54
NPM1-206ENST00000519955 RABGEF1Q9UJ41 708 aa11.65□□□□□ -0.54
NPM1-206ENST00000519955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.64□□□□□ -0.55
NPM1-206ENST00000519955 GPCPD1Q9NPB8 672 aa11.64□□□□□ -0.55
NPM1-206ENST00000519955 DAXXQ9UER7 740 aaPredicted RBP11.64□□□□□ -0.55
NPM1-206ENST00000519955 MDM2Q00987 491 aaPredicted RBP11.63□□□□□ -0.55
NPM1-206ENST00000519955 TMEM132AQ24JP5 1023 aa11.63□□□□□ -0.55
NPM1-206ENST00000519955 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
NPM1-206ENST00000519955 VPS9D1Q9Y2B5 631 aa11.63□□□□□ -0.55
NPM1-206ENST00000519955 TK2O00142 265 aa11.62□□□□□ -0.55
NPM1-206ENST00000519955 GIGYF2Q6Y7W6 1299 aaKnown RBP11.62□□□□□ -0.55
NPM1-206ENST00000519955 TMUB1Q9BVT8 246 aa11.62□□□□□ -0.55
NPM1-206ENST00000519955 C3orf80F5H4A9 247 aa11.61□□□□□ -0.55
NPM1-206ENST00000519955 RCCD1A6NED2 376 aa11.6□□□□□ -0.55
NPM1-206ENST00000519955 DNAJB2P25686 324 aa11.6□□□□□ -0.55
NPM1-206ENST00000519955 LSM11P83369 360 aaKnown RBP eCLIP11.6□□□□□ -0.55
NPM1-206ENST00000519955 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
NPM1-206ENST00000519955 SMAPO00193 183 aa11.58□□□□□ -0.56
NPM1-206ENST00000519955 NBPF3Q9H094 633 aa11.58□□□□□ -0.56
NPM1-206ENST00000519955 NLRP7Q8WX94 980 aa11.57□□□□□ -0.56
NPM1-206ENST00000519955 ADGRD1Q6QNK2 874 aa11.56□□□□□ -0.56
NPM1-206ENST00000519955 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms