RNA–Protein interactions for RNA: ENST00000519885.5

TRAPPC2-208, Transcript of trafficking protein particle complex 2, humanhuman

TSL 3 BASIC

Gene TRAPPC2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-208ENST00000519885 CRISPLD2Q9H0B8 497 aa7.96□□□□□ -1.14
TRAPPC2-208ENST00000519885 HOXB1P14653 301 aaPredicted RBP7.95□□□□□ -1.14
TRAPPC2-208ENST00000519885 BARGINQ6ZT62 677 aa7.95□□□□□ -1.14
TRAPPC2-208ENST00000519885 DDX27Q96GQ7 796 aaKnown RBP7.95□□□□□ -1.14
TRAPPC2-208ENST00000519885 SYNJ1O43426 1573 aa7.95□□□□□ -1.14
TRAPPC2-208ENST00000519885 WDR62O43379 1518 aa7.93□□□□□ -1.14
TRAPPC2-208ENST00000519885 CUX1P39880 1505 aa7.93□□□□□ -1.14
TRAPPC2-208ENST00000519885 CAMK2BQ13554 666 aa7.93□□□□□ -1.14
TRAPPC2-208ENST00000519885 KRTAP3-3Q9BYR6 98 aa7.93□□□□□ -1.14
TRAPPC2-208ENST00000519885 KRTAP3-2Q9BYR7 98 aa7.93□□□□□ -1.14
TRAPPC2-208ENST00000519885 ERBB3P21860 1342 aa7.93□□□□□ -1.14
TRAPPC2-208ENST00000519885 TOPBP1Q92547 1522 aa7.93□□□□□ -1.14
TRAPPC2-208ENST00000519885 NESP48681 1621 aa7.92□□□□□ -1.14
TRAPPC2-208ENST00000519885 KIF21AQ7Z4S6 1674 aa7.92□□□□□ -1.14
TRAPPC2-208ENST00000519885 HOXB3P14651 431 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC2-208ENST00000519885 AK7Q96M32 723 aa7.92□□□□□ -1.14
TRAPPC2-208ENST00000519885 KIF27Q86VH2 1401 aa7.92□□□□□ -1.14
TRAPPC2-208ENST00000519885 POTEB3A0JP26 581 aa7.9□□□□□ -1.14
TRAPPC2-208ENST00000519885 POTEBQ6S5H4 581 aa7.9□□□□□ -1.14
TRAPPC2-208ENST00000519885 ZSWIM6Q9HCJ5 1215 aa7.9□□□□□ -1.14
TRAPPC2-208ENST00000519885 ABCA10Q8WWZ4 1543 aa7.89□□□□□ -1.15
TRAPPC2-208ENST00000519885 FGD5Q6ZNL6 1462 aa7.89□□□□□ -1.15
TRAPPC2-208ENST00000519885 GPIHBP1Q8IV16 184 aa7.89□□□□□ -1.15
TRAPPC2-208ENST00000519885 IFT140Q96RY7 1462 aa7.88□□□□□ -1.15
TRAPPC2-208ENST00000519885 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
TRAPPC2-208ENST00000519885 URB2Q14146 1524 aaKnown RBP7.88□□□□□ -1.15
TRAPPC2-208ENST00000519885 POLA1P09884 1462 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC2-208ENST00000519885 CUL7Q14999 1698 aa7.86□□□□□ -1.15
TRAPPC2-208ENST00000519885 PPP1R15BQ5SWA1 713 aa7.86□□□□□ -1.15
TRAPPC2-208ENST00000519885 MICALL2Q8IY33 904 aa7.86□□□□□ -1.15
TRAPPC2-208ENST00000519885 KRI1Q8N9T8 703 aaKnown RBP7.86□□□□□ -1.15
TRAPPC2-208ENST00000519885 GPHNQ9NQX3 736 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC2-208ENST00000519885 ERICH3Q5RHP9 1530 aa7.86□□□□□ -1.15
TRAPPC2-208ENST00000519885 KIF21BO75037 1637 aa7.85□□□□□ -1.15
TRAPPC2-208ENST00000519885 CUX2O14529 1486 aa7.84□□□□□ -1.15
TRAPPC2-208ENST00000519885 SPDYE16A6NNV3 312 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC2-208ENST00000519885 MLLT3P42568 568 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC2-208ENST00000519885 VARS2Q5ST30 1063 aaKnown RBP7.84□□□□□ -1.15
TRAPPC2-208ENST00000519885 SOGA1O94964 1423 aa7.84□□□□□ -1.15
TRAPPC2-208ENST00000519885 GOLGA3Q08378 1498 aa7.83□□□□□ -1.16
TRAPPC2-208ENST00000519885 RBM26Q5T8P6 1007 aaKnown RBP7.83□□□□□ -1.16
TRAPPC2-208ENST00000519885 DSG2Q14126 1118 aa7.82□□□□□ -1.16
TRAPPC2-208ENST00000519885 RNF166Q96A37 237 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC2-208ENST00000519885 EMILIN3Q9NT22 766 aa7.82□□□□□ -1.16
TRAPPC2-208ENST00000519885 DPYSL4O14531 572 aa7.81□□□□□ -1.16
TRAPPC2-208ENST00000519885 PTGER2P43116 358 aa7.81□□□□□ -1.16
TRAPPC2-208ENST00000519885 ZNF687Q8N1G0 1237 aa7.81□□□□□ -1.16
TRAPPC2-208ENST00000519885 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
TRAPPC2-208ENST00000519885 GPBP1L1Q9HC44 474 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC2-208ENST00000519885 TARBP1Q13395 1621 aaKnown RBP7.81□□□□□ -1.16
TRAPPC2-208ENST00000519885 ABCA5Q8WWZ7 1642 aa7.81□□□□□ -1.16
TRAPPC2-208ENST00000519885 TRIM66O15016 1216 aa7.79□□□□□ -1.16
TRAPPC2-208ENST00000519885 PDE4DQ08499 809 aa7.79□□□□□ -1.16
TRAPPC2-208ENST00000519885 PDIA6Q15084 440 aa7.79□□□□□ -1.16
TRAPPC2-208ENST00000519885 MYT1LQ9UL68 1186 aa7.79□□□□□ -1.16
TRAPPC2-208ENST00000519885 GRIN2BQ13224 1484 aa7.79□□□□□ -1.16
TRAPPC2-208ENST00000519885 GAPVD1Q14C86 1478 aa7.79□□□□□ -1.16
TRAPPC2-208ENST00000519885 GPR153Q6NV75 609 aa7.78□□□□□ -1.16
TRAPPC2-208ENST00000519885 IL27Q8NEV9 243 aa7.78□□□□□ -1.16
TRAPPC2-208ENST00000519885 TMC2Q8TDI7 906 aa7.78□□□□□ -1.16
TRAPPC2-208ENST00000519885 ZMYND15Q9H091 742 aa7.78□□□□□ -1.16
TRAPPC2-208ENST00000519885 RSPH6AQ9H0K4 717 aa7.78□□□□□ -1.16
TRAPPC2-208ENST00000519885 MAGI1Q96QZ7 1491 aaPredicted RBP7.78□□□□□ -1.16
TRAPPC2-208ENST00000519885 PRXQ9BXM0 1461 aa7.78□□□□□ -1.16
TRAPPC2-208ENST00000519885 RAPGEF2Q9Y4G8 1499 aa7.77□□□□□ -1.17
TRAPPC2-208ENST00000519885 TMEM92Q6UXU6 159 aa7.77□□□□□ -1.17
TRAPPC2-208ENST00000519885 FOXK1P85037 733 aa7.76□□□□□ -1.17
TRAPPC2-208ENST00000519885 PLPP6Q8IY26 295 aa7.76□□□□□ -1.17
TRAPPC2-208ENST00000519885 PBRM1Q86U86 1689 aa7.76□□□□□ -1.17
TRAPPC2-208ENST00000519885 EIF4G3O43432 1585 aaKnown RBP7.76□□□□□ -1.17
TRAPPC2-208ENST00000519885 C2orf72A6NCS6 295 aa7.75□□□□□ -1.17
TRAPPC2-208ENST00000519885 FHAD1B1AJZ9 1412 aa7.75□□□□□ -1.17
TRAPPC2-208ENST00000519885 TNIKQ9UKE5 1360 aa7.74□□□□□ -1.17
TRAPPC2-208ENST00000519885 RAD54L2Q9Y4B4 1467 aa7.74□□□□□ -1.17
TRAPPC2-208ENST00000519885 CARMIL1Q5VZK9 1371 aa7.73□□□□□ -1.17
TRAPPC2-208ENST00000519885 ADAMTS12P58397 1594 aa7.73□□□□□ -1.17
TRAPPC2-208ENST00000519885 ARSIQ5FYB1 569 aa7.73□□□□□ -1.17
TRAPPC2-208ENST00000519885 MINK1Q8N4C8 1332 aaPredicted RBP7.73□□□□□ -1.17
TRAPPC2-208ENST00000519885 ZNF316A6NFI3 1004 aaPredicted RBP7.72□□□□□ -1.17
TRAPPC2-208ENST00000519885 DDRGK1Q96HY6 314 aa7.72□□□□□ -1.17
TRAPPC2-208ENST00000519885 IGF1RP08069 1367 aa7.71□□□□□ -1.17
TRAPPC2-208ENST00000519885 SYNJ2O15056 1496 aa7.71□□□□□ -1.18
TRAPPC2-208ENST00000519885 KIF3CO14782 793 aa7.71□□□□□ -1.18
TRAPPC2-208ENST00000519885 GPR37O15354 613 aa7.71□□□□□ -1.18
TRAPPC2-208ENST00000519885 MAP2K5Q13163 448 aa7.71□□□□□ -1.18
TRAPPC2-208ENST00000519885 ANKRD13DQ6ZTN6 518 aa7.71□□□□□ -1.18
TRAPPC2-208ENST00000519885 EFCAB5A4FU69 1503 aa7.71□□□□□ -1.18
TRAPPC2-208ENST00000519885 GRXCR2A6NFK2 248 aa7.7□□□□□ -1.18
TRAPPC2-208ENST00000519885 MAP3K9P80192 1104 aa7.7□□□□□ -1.18
TRAPPC2-208ENST00000519885 FAM9AQ8IZU1 332 aaPredicted RBP7.69□□□□□ -1.18
TRAPPC2-208ENST00000519885 UPF1Q92900 1129 aaKnown RBP eCLIP7.69□□□□□ -1.18
TRAPPC2-208ENST00000519885 CTTNBP2Q8WZ74 1663 aa7.69□□□□□ -1.18
TRAPPC2-208ENST00000519885 UBTFP17480 764 aaKnown RBP7.68□□□□□ -1.18
TRAPPC2-208ENST00000519885 PBX2P40425 430 aa7.68□□□□□ -1.18
TRAPPC2-208ENST00000519885 FLIIQ13045 1269 aa7.68□□□□□ -1.18
TRAPPC2-208ENST00000519885 AMHR2Q16671 573 aa7.68□□□□□ -1.18
TRAPPC2-208ENST00000519885 TDRD9Q8NDG6 1382 aaKnown RBP7.68□□□□□ -1.18
TRAPPC2-208ENST00000519885 CCDC102AQ96A19 550 aa7.67□□□□□ -1.18
TRAPPC2-208ENST00000519885 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
TRAPPC2-208ENST00000519885 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms