RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 COG6Q9Y2V7 657 aa11.42□□□□□ -0.58
CLK4-202ENST00000519132 PEG3Q9GZU2 1588 aa11.42□□□□□ -0.58
CLK4-202ENST00000519132 EIF4G1Q04637 1599 aaKnown RBP11.41□□□□□ -0.58
CLK4-202ENST00000519132 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
CLK4-202ENST00000519132 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
CLK4-202ENST00000519132 MDM2Q00987 491 aaPredicted RBP11.38□□□□□ -0.59
CLK4-202ENST00000519132 WIZO95785 1651 aa11.38□□□□□ -0.59
CLK4-202ENST00000519132 TMEM106CQ9BVX2 250 aa11.38□□□□□ -0.59
CLK4-202ENST00000519132 POM121CA8CG34 1229 aa11.37□□□□□ -0.59
CLK4-202ENST00000519132 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
CLK4-202ENST00000519132 HIC1Q14526 733 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 PRKAR2AP13861 404 aaKnown RBP11.35□□□□□ -0.59
CLK4-202ENST00000519132 FBXW7Q969H0 707 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 GDPD2Q9HCC8 539 aa11.35□□□□□ -0.59
CLK4-202ENST00000519132 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
CLK4-202ENST00000519132 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
CLK4-202ENST00000519132 PTGDRQ13258 359 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 SH3D19Q5HYK7 790 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 RBM42Q9BTD8 480 aaKnown RBP11.33□□□□□ -0.6
CLK4-202ENST00000519132 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
CLK4-202ENST00000519132 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
CLK4-202ENST00000519132 ATAD2BQ9ULI0 1458 aa11.31□□□□□ -0.6
CLK4-202ENST00000519132 CACNB1Q02641 598 aaPredicted RBP11.3□□□□□ -0.6
CLK4-202ENST00000519132 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
CLK4-202ENST00000519132 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
CLK4-202ENST00000519132 FCHSD2O94868 740 aa11.29□□□□□ -0.6
CLK4-202ENST00000519132 RFX1P22670 979 aa11.29□□□□□ -0.6
CLK4-202ENST00000519132 EIF5BO60841 1220 aaKnown RBP11.28□□□□□ -0.6
CLK4-202ENST00000519132 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
CLK4-202ENST00000519132 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
CLK4-202ENST00000519132 SSTR3P32745 418 aaPredicted RBP11.28□□□□□ -0.6
CLK4-202ENST00000519132 FOXK1P85037 733 aa11.28□□□□□ -0.6
CLK4-202ENST00000519132 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
CLK4-202ENST00000519132 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.27□□□□□ -0.61
CLK4-202ENST00000519132 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.61
CLK4-202ENST00000519132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.618e-7■■■■□ 26.7
CLK4-202ENST00000519132 NCAPD3P42695 1498 aa11.26□□□□□ -0.61
CLK4-202ENST00000519132 SKIV2LQ15477 1246 aaKnown RBP11.26□□□□□ -0.61
CLK4-202ENST00000519132 MYSM1Q5VVJ2 828 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 MICALL2Q8IY33 904 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 MTMR14Q8NCE2 650 aa11.25□□□□□ -0.61
CLK4-202ENST00000519132 NPDC1Q9NQX5 325 aaPredicted RBP11.24□□□□□ -0.61
CLK4-202ENST00000519132 GLMNQ92990 594 aa11.23□□□□□ -0.61
CLK4-202ENST00000519132 BAZ1BQ9UIG0 1483 aaKnown RBP11.23□□□□□ -0.61
CLK4-202ENST00000519132 ABL2P42684 1182 aa11.22□□□□□ -0.61
CLK4-202ENST00000519132 TMC2Q8TDI7 906 aa11.22□□□□□ -0.61
CLK4-202ENST00000519132 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
CLK4-202ENST00000519132 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
CLK4-202ENST00000519132 RFC5P40937 340 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 ADAMTS19Q8TE59 1207 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 MS4A3Q96HJ5 214 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 LIMD1Q9UGP4 676 aa11.21□□□□□ -0.61
CLK4-202ENST00000519132 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
CLK4-202ENST00000519132 TSR1Q2NL82 804 aaKnown RBP11.2□□□□□ -0.62
CLK4-202ENST00000519132 BCL11AQ9H165 835 aa11.2□□□□□ -0.62
CLK4-202ENST00000519132 ZRANB1Q9UGI0 708 aa11.2□□□□□ -0.62
CLK4-202ENST00000519132 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
CLK4-202ENST00000519132 TBC1D12O60347 775 aa11.19□□□□□ -0.62
CLK4-202ENST00000519132 SPDYE5A6NIY4 337 aa11.18□□□□□ -0.62
CLK4-202ENST00000519132 TMEM92Q6UXU6 159 aa11.17□□□□□ -0.62
CLK4-202ENST00000519132 RBM33Q96EV2 1170 aaKnown RBP11.17□□□□□ -0.62
CLK4-202ENST00000519132 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
CLK4-202ENST00000519132 ILDR1Q86SU0 546 aaPredicted RBP11.15□□□□□ -0.62
CLK4-202ENST00000519132 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
CLK4-202ENST00000519132 POTEDQ86YR6 584 aa11.15□□□□□ -0.62
CLK4-202ENST00000519132 CLCN1P35523 988 aa11.15□□□□□ -0.63
CLK4-202ENST00000519132 CLK2P49760 499 aaKnown RBP11.14□□□□□ -0.63
CLK4-202ENST00000519132 UNCXA6NJT0 531 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 TTLL13PA6NNM8 815 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 KIF3CO14782 793 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 QPCTQ16769 361 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 CDCA8Q53HL2 280 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 USP35Q9P2H5 1018 aa11.13□□□□□ -0.63
CLK4-202ENST00000519132 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
CLK4-202ENST00000519132 E9PSI1 815 aa11.12□□□□□ -0.63
CLK4-202ENST00000519132 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
CLK4-202ENST00000519132 IVNS1ABPQ9Y6Y0 642 aa11.12□□□□□ -0.63
CLK4-202ENST00000519132 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
CLK4-202ENST00000519132 EVI5O60447 810 aa11.09□□□□□ -0.63
CLK4-202ENST00000519132 METTL3Q86U44 580 aaKnown RBP11.09□□□□□ -0.63
CLK4-202ENST00000519132 TRIM35Q9UPQ4 493 aa11.09□□□□□ -0.63
CLK4-202ENST00000519132 MAP3K7O43318 606 aa11.08□□□□□ -0.64
CLK4-202ENST00000519132 CFAP70Q5T0N1 1121 aa11.07□□□□□ -0.64
CLK4-202ENST00000519132 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
CLK4-202ENST00000519132 PTGER2P43116 358 aa11.06□□□□□ -0.64
CLK4-202ENST00000519132 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
CLK4-202ENST00000519132 BMP2KQ9NSY1 1161 aaPredicted RBP11.04□□□□□ -0.64
CLK4-202ENST00000519132 CCDC27Q2M243 656 aa11.03□□□□□ -0.64
CLK4-202ENST00000519132 GPR37L1O60883 481 aa11.03□□□□□ -0.64
CLK4-202ENST00000519132 SRPK2P78362 688 aaKnown RBP11.03□□□□□ -0.64
CLK4-202ENST00000519132 PCDHB15Q9Y5E8 787 aa11.02□□□□□ -0.64
CLK4-202ENST00000519132 ACIN1Q9UKV3 1341 aaKnown RBP11.02□□□□□ -0.65
CLK4-202ENST00000519132 PBXIP1Q96AQ6 731 aa11.02□□□□□ -0.65
CLK4-202ENST00000519132 HMX1Q9NP08 348 aaPredicted RBP11.02□□□□□ -0.65
CLK4-202ENST00000519132 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
CLK4-202ENST00000519132 FXR2P51116 673 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms