RNA–Protein interactions for RNA: ENST00000518428.1

AC048387.1-201, humanhuman

TSL 3 BASIC

Gene AC048387.1, Length 494 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048387.1-201ENST00000518428 C2orf72A6NCS6 295 aa8.68□□□□□ -1.02
AC048387.1-201ENST00000518428 CCDC102AQ96A19 550 aa8.68□□□□□ -1.02
AC048387.1-201ENST00000518428 MAP2K5Q13163 448 aa8.67□□□□□ -1.02
AC048387.1-201ENST00000518428 TMEM92Q6UXU6 159 aa8.67□□□□□ -1.02
AC048387.1-201ENST00000518428 RAD21O60216 631 aa8.66□□□□□ -1.02
AC048387.1-201ENST00000518428 ABCC9O60706 1549 aa8.65□□□□□ -1.02
AC048387.1-201ENST00000518428 SPDYE16A6NNV3 312 aaPredicted RBP8.65□□□□□ -1.02
AC048387.1-201ENST00000518428 MCM6Q14566 821 aa8.65□□□□□ -1.02
AC048387.1-201ENST00000518428 IRF6O14896 467 aa8.64□□□□□ -1.03
AC048387.1-201ENST00000518428 PDIA6Q15084 440 aa8.64□□□□□ -1.03
AC048387.1-201ENST00000518428 RGS22Q8NE09 1264 aa8.64□□□□□ -1.03
AC048387.1-201ENST00000518428 PCMTD1Q96MG8 357 aaPredicted RBP8.64□□□□□ -1.03
AC048387.1-201ENST00000518428 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
AC048387.1-201ENST00000518428 SERPINA10Q9UK55 444 aa8.64□□□□□ -1.03
AC048387.1-201ENST00000518428 PROSER2Q86WR7 435 aaPredicted RBP8.63□□□□□ -1.03
AC048387.1-201ENST00000518428 PLPP6Q8IY26 295 aa8.63□□□□□ -1.03
AC048387.1-201ENST00000518428 MARVELD3Q96A59 401 aa8.63□□□□□ -1.03
AC048387.1-201ENST00000518428 DPYSL4O14531 572 aa8.62□□□□□ -1.03
AC048387.1-201ENST00000518428 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
AC048387.1-201ENST00000518428 CCDC97Q96F63 343 aaPredicted RBP8.62□□□□□ -1.03
AC048387.1-201ENST00000518428 ZNF777Q9ULD5 760 aaPredicted RBP8.62□□□□□ -1.03
AC048387.1-201ENST00000518428 NISCHQ9Y2I1 1504 aa8.61□□□□□ -1.03
AC048387.1-201ENST00000518428 C3orf67Q6ZVT6 689 aa8.61□□□□□ -1.03
AC048387.1-201ENST00000518428 FNBP4Q8N3X1 1017 aaPredicted RBP8.6□□□□□ -1.03
AC048387.1-201ENST00000518428 TMCO4Q5TGY1 634 aa8.59□□□□□ -1.03
AC048387.1-201ENST00000518428 MTMR7Q9Y216 660 aa8.58□□□□□ -1.04
AC048387.1-201ENST00000518428 LOC105371045A0A1W2PR82 267 aa8.57□□□□□ -1.04
AC048387.1-201ENST00000518428 TTLL12Q14166 644 aaPredicted RBP8.57□□□□□ -1.04
AC048387.1-201ENST00000518428 GNPATO15228 680 aa8.56□□□□□ -1.04
AC048387.1-201ENST00000518428 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.56□□□□□ -1.04
AC048387.1-201ENST00000518428 NUTM2FA1L443 756 aa8.55□□□□□ -1.04
AC048387.1-201ENST00000518428 MFAP1P55081 439 aaKnown RBP8.55□□□□□ -1.04
AC048387.1-201ENST00000518428 SH3D19Q5HYK7 790 aa8.55□□□□□ -1.04
AC048387.1-201ENST00000518428 RETREG2Q8NC44 543 aa8.55□□□□□ -1.04
AC048387.1-201ENST00000518428 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
AC048387.1-201ENST00000518428 KRTAP3-3Q9BYR6 98 aa8.55□□□□□ -1.04
AC048387.1-201ENST00000518428 KRTAP3-2Q9BYR7 98 aa8.55□□□□□ -1.04
AC048387.1-201ENST00000518428 MS4A1P11836 297 aa8.54□□□□□ -1.04
AC048387.1-201ENST00000518428 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
AC048387.1-201ENST00000518428 POM121Q96HA1 1249 aa8.54□□□□□ -1.04
AC048387.1-201ENST00000518428 HIC1Q14526 733 aa8.53□□□□□ -1.04
AC048387.1-201ENST00000518428 GZF1Q9H116 711 aaPredicted RBP8.53□□□□□ -1.04
AC048387.1-201ENST00000518428 SLC34A2O95436 690 aa8.52□□□□□ -1.05
AC048387.1-201ENST00000518428 PTCD2Q8WV60 388 aaKnown RBP8.52□□□□□ -1.05
AC048387.1-201ENST00000518428 IRF5Q13568 498 aa8.51□□□□□ -1.05
AC048387.1-201ENST00000518428 IGSF3O75054 1194 aa8.5□□□□□ -1.05
AC048387.1-201ENST00000518428 FCHSD2O94868 740 aa8.5□□□□□ -1.05
AC048387.1-201ENST00000518428 FECHP22830 423 aa8.5□□□□□ -1.05
AC048387.1-201ENST00000518428 MAP3K9P80192 1104 aa8.5□□□□□ -1.05
AC048387.1-201ENST00000518428 GRXCR2A6NFK2 248 aa8.49□□□□□ -1.05
AC048387.1-201ENST00000518428 SNPHO15079 494 aa8.49□□□□□ -1.05
AC048387.1-201ENST00000518428 FOXD4L5Q5VV16 416 aaPredicted RBP8.49□□□□□ -1.05
AC048387.1-201ENST00000518428 FOXD4L4Q8WXT5 416 aaPredicted RBP8.49□□□□□ -1.05
AC048387.1-201ENST00000518428 UPF1Q92900 1129 aaKnown RBP eCLIP8.49□□□□□ -1.05
AC048387.1-201ENST00000518428 RBM25P49756 843 aaKnown RBP8.48□□□□□ -1.05
AC048387.1-201ENST00000518428 SHROOM4Q9ULL8 1493 aa8.47□□□□□ -1.05
AC048387.1-201ENST00000518428 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
AC048387.1-201ENST00000518428 REPIN1Q9BWE0 567 aaKnown RBP8.47□□□□□ -1.05
AC048387.1-201ENST00000518428 OSBPP22059 807 aa8.46□□□□□ -1.06
AC048387.1-201ENST00000518428 PTGER2P43116 358 aa8.46□□□□□ -1.06
AC048387.1-201ENST00000518428 COG6Q9Y2V7 657 aa8.46□□□□□ -1.06
AC048387.1-201ENST00000518428 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
AC048387.1-201ENST00000518428 SPDYE5A6NIY4 337 aa8.45□□□□□ -1.06
AC048387.1-201ENST00000518428 TBC1D12O60347 775 aa8.45□□□□□ -1.06
AC048387.1-201ENST00000518428 PPP1R15AO75807 674 aaPredicted RBP8.45□□□□□ -1.06
AC048387.1-201ENST00000518428 EMP3P54852 163 aa8.45□□□□□ -1.06
AC048387.1-201ENST00000518428 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
AC048387.1-201ENST00000518428 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
AC048387.1-201ENST00000518428 EVI5O60447 810 aa8.44□□□□□ -1.06
AC048387.1-201ENST00000518428 PDE4CQ08493 712 aa8.44□□□□□ -1.06
AC048387.1-201ENST00000518428 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
AC048387.1-201ENST00000518428 PATL2C9JE40 543 aaKnown RBP8.43□□□□□ -1.06
AC048387.1-201ENST00000518428 HS3ST6Q96QI5 342 aa8.43□□□□□ -1.06
AC048387.1-201ENST00000518428 TMUB1Q9BVT8 246 aa8.43□□□□□ -1.06
AC048387.1-201ENST00000518428 ANO8Q9HCE9 1232 aaPredicted RBP8.43□□□□□ -1.06
AC048387.1-201ENST00000518428 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
AC048387.1-201ENST00000518428 PCDHGA4Q9Y5G9 962 aa8.42□□□□□ -1.06
AC048387.1-201ENST00000518428 KDM4FA0A1W2PPD8 638 aa8.41□□□□□ -1.06
AC048387.1-201ENST00000518428 HOXB3P14651 431 aaPredicted RBP8.41□□□□□ -1.06
AC048387.1-201ENST00000518428 CLCN1P35523 988 aa8.41□□□□□ -1.06
AC048387.1-201ENST00000518428 PROCA1Q8NCQ7 364 aaPredicted RBP8.41□□□□□ -1.06
AC048387.1-201ENST00000518428 E9PSI1 815 aa8.4□□□□□ -1.06
AC048387.1-201ENST00000518428 PTGDRQ13258 359 aa8.4□□□□□ -1.06
AC048387.1-201ENST00000518428 FAM205CA6NFA0 338 aa8.39□□□□□ -1.07
AC048387.1-201ENST00000518428 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
AC048387.1-201ENST00000518428 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
AC048387.1-201ENST00000518428 ACIN1Q9UKV3 1341 aaKnown RBP8.38□□□□□ -1.07
AC048387.1-201ENST00000518428 DOK7Q18PE1 504 aa8.38□□□□□ -1.07
AC048387.1-201ENST00000518428 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
AC048387.1-201ENST00000518428 ZSWIM6Q9HCJ5 1215 aa8.38□□□□□ -1.07
AC048387.1-201ENST00000518428 GPCPD1Q9NPB8 672 aa8.38□□□□□ -1.07
AC048387.1-201ENST00000518428 DDX12PQ92771 950 aa8.37□□□□□ -1.07
AC048387.1-201ENST00000518428 ATP1B4Q9UN42 357 aaPredicted RBP8.37□□□□□ -1.07
AC048387.1-201ENST00000518428 SSTR3P32745 418 aaPredicted RBP8.36□□□□□ -1.07
AC048387.1-201ENST00000518428 KCNA1Q09470 495 aa8.36□□□□□ -1.07
AC048387.1-201ENST00000518428 SNRKQ9NRH2 765 aa8.36□□□□□ -1.07
AC048387.1-201ENST00000518428 PHF14O94880 888 aa8.35□□□□□ -1.07
AC048387.1-201ENST00000518428 PRIM1P49642 420 aaKnown RBP8.35□□□□□ -1.07
AC048387.1-201ENST00000518428 MDM2Q00987 491 aaPredicted RBP8.35□□□□□ -1.07
AC048387.1-201ENST00000518428 BEGAINQ9BUH8 593 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms