RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 FOXD4L3Q6VB84 417 aaPredicted RBP20.68■□□□□ 0.9
MTCL1-205ENST00000517570 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
MTCL1-205ENST00000517570 HDGFP51858 240 aaKnown RBP20.68■□□□□ 0.9
MTCL1-205ENST00000517570 NLRP13Q86W25 1043 aa20.68■□□□□ 0.9
MTCL1-205ENST00000517570 SKOR2Q2VWA4 1001 aaPredicted RBP20.68■□□□□ 0.9
MTCL1-205ENST00000517570 KIF15Q9NS87 1388 aa20.67■□□□□ 0.9
MTCL1-205ENST00000517570 RRP1P56182 461 aaKnown RBP20.67■□□□□ 0.9
MTCL1-205ENST00000517570 RASSF8Q8NHQ8 419 aa20.67■□□□□ 0.9
MTCL1-205ENST00000517570 ZNF771Q7L3S4 317 aaPredicted RBP20.67■□□□□ 0.9
MTCL1-205ENST00000517570 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
MTCL1-205ENST00000517570 TPM3P06753 285 aa20.66■□□□□ 0.9
MTCL1-205ENST00000517570 L3MBTL2Q969R5 705 aa20.66■□□□□ 0.9
MTCL1-205ENST00000517570 RRP7AQ9Y3A4 280 aaKnown RBP20.66■□□□□ 0.9
MTCL1-205ENST00000517570 SETQ01105 290 aaPredicted RBP20.66■□□□□ 0.9
MTCL1-205ENST00000517570 CCDC34Q96HJ3 373 aa20.66■□□□□ 0.9
MTCL1-205ENST00000517570 MYBBP1AQ9BQG0 1328 aaKnown RBP20.65■□□□□ 0.9
MTCL1-205ENST00000517570 FMN1Q68DA7 1419 aa20.65■□□□□ 0.9
MTCL1-205ENST00000517570 GGT6Q6P531 493 aa20.65■□□□□ 0.9
MTCL1-205ENST00000517570 CCAR2Q8N163 923 aaKnown RBP20.63■□□□□ 0.89
MTCL1-205ENST00000517570 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
MTCL1-205ENST00000517570 SF3A1Q15459 793 aaKnown RBP20.63■□□□□ 0.89
MTCL1-205ENST00000517570 ANKRD45Q5TZF3 282 aa20.62■□□□□ 0.89
MTCL1-205ENST00000517570 ZNF592Q92610 1267 aa20.62■□□□□ 0.89
MTCL1-205ENST00000517570 H3BQV1 296 aa20.62■□□□□ 0.89
MTCL1-205ENST00000517570 IFFO2Q5TF58 517 aa20.62■□□□□ 0.89
MTCL1-205ENST00000517570 RILPL2Q969X0 211 aa20.62■□□□□ 0.89
MTCL1-205ENST00000517570 TAF7LQ5H9L4 462 aa20.61■□□□□ 0.89
MTCL1-205ENST00000517570 BCL2L13Q9BXK5 485 aa20.6■□□□□ 0.89
MTCL1-205ENST00000517570 GOLGA6L19H0YKK7 550 aa20.6■□□□□ 0.89
MTCL1-205ENST00000517570 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
MTCL1-205ENST00000517570 CSB-PGBD3P0DP91 1061 aa20.59■□□□□ 0.89
MTCL1-205ENST00000517570 FAM13BQ9NYF5 915 aa20.58■□□□□ 0.89
MTCL1-205ENST00000517570 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
MTCL1-205ENST00000517570 PES1O00541 588 aaKnown RBP20.58■□□□□ 0.88
MTCL1-205ENST00000517570 TPD52L1Q16890 204 aaPredicted RBP20.57■□□□□ 0.88
MTCL1-205ENST00000517570 ZBED9Q6R2W3 1325 aa20.56■□□□□ 0.88
MTCL1-205ENST00000517570 TOMM22Q9NS69 142 aa20.55■□□□□ 0.88
MTCL1-205ENST00000517570 CCDC88BA6NC98 1476 aa20.55■□□□□ 0.88
MTCL1-205ENST00000517570 LMOD3Q0VAK6 560 aa20.55■□□□□ 0.88
MTCL1-205ENST00000517570 BECN2A8MW95 431 aa20.54■□□□□ 0.88
MTCL1-205ENST00000517570 FAM184AQ8NB25 1140 aa20.54■□□□□ 0.88
MTCL1-205ENST00000517570 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
MTCL1-205ENST00000517570 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
MTCL1-205ENST00000517570 PANK3Q9H999 370 aa20.54■□□□□ 0.88
MTCL1-205ENST00000517570 COG6Q9Y2V7 657 aa20.54■□□□□ 0.88
MTCL1-205ENST00000517570 KIF3AQ9Y496 699 aa20.54■□□□□ 0.88
MTCL1-205ENST00000517570 CECR2Q9BXF3 1484 aa20.53■□□□□ 0.88
MTCL1-205ENST00000517570 CCDC9Q9Y3X0 531 aaKnown RBP20.53■□□□□ 0.88
MTCL1-205ENST00000517570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.52■□□□□ 0.88
MTCL1-205ENST00000517570 HDAC5Q9UQL6 1122 aa20.52■□□□□ 0.87
MTCL1-205ENST00000517570 ATP6V1DQ9Y5K8 247 aa20.52■□□□□ 0.87
MTCL1-205ENST00000517570 DHX57Q6P158 1386 aaKnown RBP20.52■□□□□ 0.87
MTCL1-205ENST00000517570 ANO8Q9HCE9 1232 aaPredicted RBP20.51■□□□□ 0.87
MTCL1-205ENST00000517570 ZKSCAN2Q63HK3 967 aa20.51■□□□□ 0.87
MTCL1-205ENST00000517570 GPS2Q13227 327 aa20.51■□□□□ 0.87
MTCL1-205ENST00000517570 E9PSI1 815 aa20.51■□□□□ 0.87
MTCL1-205ENST00000517570 PATL2C9JE40 543 aaKnown RBP20.5■□□□□ 0.87
MTCL1-205ENST00000517570 CHMP4AQ9BY43 222 aa20.5■□□□□ 0.87
MTCL1-205ENST00000517570 PRM3Q9NNZ6 103 aa20.5■□□□□ 0.87
MTCL1-205ENST00000517570 ELL2O00472 640 aaPredicted RBP20.49■□□□□ 0.87
MTCL1-205ENST00000517570 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.49■□□□□ 0.87
MTCL1-205ENST00000517570 TSR1Q2NL82 804 aaKnown RBP20.49■□□□□ 0.87
MTCL1-205ENST00000517570 MCTP1Q6DN14 999 aa20.49■□□□□ 0.87
MTCL1-205ENST00000517570 PRKRIP1Q9H875 184 aaPredicted RBP20.48■□□□□ 0.87
MTCL1-205ENST00000517570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.48■□□□□ 0.87
MTCL1-205ENST00000517570 CEP89Q96ST8 783 aa20.48■□□□□ 0.87
MTCL1-205ENST00000517570 CHMP5Q9NZZ3 219 aa20.47■□□□□ 0.87
MTCL1-205ENST00000517570 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
MTCL1-205ENST00000517570 FAM43AQ8N2R8 423 aa20.46■□□□□ 0.87
MTCL1-205ENST00000517570 HNRNPMP52272 730 aaKnown RBP eCLIP20.46■□□□□ 0.87
MTCL1-205ENST00000517570 MARCH6O60337 910 aa20.45■□□□□ 0.86
MTCL1-205ENST00000517570 VPS53Q5VIR6 699 aa20.45■□□□□ 0.86
MTCL1-205ENST00000517570 CCDC70Q6NSX1 233 aa20.45■□□□□ 0.86
MTCL1-205ENST00000517570 TPM1P09493 284 aa20.45■□□□□ 0.86
MTCL1-205ENST00000517570 LTV1Q96GA3 475 aaPredicted RBP20.44■□□□□ 0.86
MTCL1-205ENST00000517570 TEX35Q5T0J7 233 aa20.44■□□□□ 0.86
MTCL1-205ENST00000517570 ANO2Q9NQ90 1003 aa20.44■□□□□ 0.86
MTCL1-205ENST00000517570 TPM2P07951 284 aa20.44■□□□□ 0.86
MTCL1-205ENST00000517570 CGNL1Q0VF96 1302 aa20.43■□□□□ 0.86
MTCL1-205ENST00000517570 AMPHP49418 695 aa20.43■□□□□ 0.86
MTCL1-205ENST00000517570 DIAPH3Q9NSV4 1193 aa20.42■□□□□ 0.86
MTCL1-205ENST00000517570 NFKBIBQ15653 356 aa20.41■□□□□ 0.86
MTCL1-205ENST00000517570 BCL11BQ9C0K0 894 aaPredicted RBP20.41■□□□□ 0.86
MTCL1-205ENST00000517570 HOMER1Q86YM7 354 aa20.41■□□□□ 0.86
MTCL1-205ENST00000517570 TRAK1Q9UPV9 953 aa20.41■□□□□ 0.86
MTCL1-205ENST00000517570 FBXW7Q969H0 707 aa20.41■□□□□ 0.86
MTCL1-205ENST00000517570 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.86
MTCL1-205ENST00000517570 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
MTCL1-205ENST00000517570 PCMTD1Q96MG8 357 aaPredicted RBP20.39■□□□□ 0.85
MTCL1-205ENST00000517570 REC8O95072 547 aa20.38■□□□□ 0.85
MTCL1-205ENST00000517570 R3HCC1Q9Y3T6 440 aaKnown RBP20.38■□□□□ 0.85
MTCL1-205ENST00000517570 KIF3BO15066 747 aa20.38■□□□□ 0.85
MTCL1-205ENST00000517570 BICD2Q8TD16 824 aa20.38■□□□□ 0.85
MTCL1-205ENST00000517570 USP47Q96K76 1375 aa20.37■□□□□ 0.85
MTCL1-205ENST00000517570 DDX19BQ9UMR2 479 aa20.37■□□□□ 0.85
MTCL1-205ENST00000517570 APAF1O14727 1248 aa20.37■□□□□ 0.85
MTCL1-205ENST00000517570 AKAP17AQ02040 695 aaKnown RBP20.37■□□□□ 0.85
MTCL1-205ENST00000517570 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
MTCL1-205ENST00000517570 FRAT2O75474 233 aaPredicted RBP20.36■□□□□ 0.85
MTCL1-205ENST00000517570 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms