RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 ST18O60284 1047 aa10.42□□□□□ -0.74
RNU6-1028P-201ENST00000517164 PPP4R3BQ5MIZ7 849 aa10.42□□□□□ -0.74
RNU6-1028P-201ENST00000517164 C6orf132Q5T0Z8 1188 aa10.42□□□□□ -0.74
RNU6-1028P-201ENST00000517164 PSDA5PKW4 1024 aaPredicted RBP10.41□□□□□ -0.74
RNU6-1028P-201ENST00000517164 MAP2K5Q13163 448 aa10.38□□□□□ -0.75
RNU6-1028P-201ENST00000517164 AK7Q96M32 723 aa10.38□□□□□ -0.75
RNU6-1028P-201ENST00000517164 BCL2L12Q9HB09 334 aa10.38□□□□□ -0.75
RNU6-1028P-201ENST00000517164 MARVELD3Q96A59 401 aa10.37□□□□□ -0.75
RNU6-1028P-201ENST00000517164 MINK1Q8N4C8 1332 aaPredicted RBP10.36□□□□□ -0.75
RNU6-1028P-201ENST00000517164 CCDC102AQ96A19 550 aa10.36□□□□□ -0.75
RNU6-1028P-201ENST00000517164 FAM163AQ96GL9 167 aaPredicted RBP10.36□□□□□ -0.75
RNU6-1028P-201ENST00000517164 IRF6O14896 467 aa10.35□□□□□ -0.75
RNU6-1028P-201ENST00000517164 EMP3P54852 163 aa10.35□□□□□ -0.75
RNU6-1028P-201ENST00000517164 ERBB3P21860 1342 aa10.34□□□□□ -0.75
RNU6-1028P-201ENST00000517164 COL9A1P20849 921 aa10.34□□□□□ -0.75
RNU6-1028P-201ENST00000517164 BRPF1P55201 1214 aaPredicted RBP10.34□□□□□ -0.75
RNU6-1028P-201ENST00000517164 VARS2Q5ST30 1063 aaKnown RBP10.34□□□□□ -0.75
RNU6-1028P-201ENST00000517164 CERKQ8TCT0 537 aa10.34□□□□□ -0.75
RNU6-1028P-201ENST00000517164 TRIM66O15016 1216 aa10.33□□□□□ -0.76
RNU6-1028P-201ENST00000517164 PTPREP23469 700 aa10.33□□□□□ -0.76
RNU6-1028P-201ENST00000517164 PADI6Q6TGC4 694 aa10.32□□□□□ -0.76
RNU6-1028P-201ENST00000517164 LCE2DQ5TA82 110 aaPredicted RBP10.31□□□□□ -0.76
RNU6-1028P-201ENST00000517164 FAM205CA6NFA0 338 aa10.3□□□□□ -0.76
RNU6-1028P-201ENST00000517164 PPP1R3GB7ZBB8 358 aa10.3□□□□□ -0.76
RNU6-1028P-201ENST00000517164 NEUROD2Q15784 382 aa10.3□□□□□ -0.76
RNU6-1028P-201ENST00000517164 CDCA7LQ96GN5 454 aa10.3□□□□□ -0.76
RNU6-1028P-201ENST00000517164 KCNK17Q96T54 332 aa10.3□□□□□ -0.76
RNU6-1028P-201ENST00000517164 PRSS12P56730 875 aa10.29□□□□□ -0.76
RNU6-1028P-201ENST00000517164 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
RNU6-1028P-201ENST00000517164 RBM27Q9P2N5 1060 aaKnown RBP10.29□□□□□ -0.76
RNU6-1028P-201ENST00000517164 PDE4DQ08499 809 aa10.28□□□□□ -0.76
RNU6-1028P-201ENST00000517164 TTC13Q8NBP0 860 aa10.28□□□□□ -0.76
RNU6-1028P-201ENST00000517164 POTEEQ6S8J3 1075 aa10.27□□□□□ -0.77
RNU6-1028P-201ENST00000517164 PSEN2P49810 448 aa10.26□□□□□ -0.77
RNU6-1028P-201ENST00000517164 GPBP1L1Q9HC44 474 aaPredicted RBP10.26□□□□□ -0.77
RNU6-1028P-201ENST00000517164 FAM198AQ9UFP1 575 aa10.26□□□□□ -0.77
RNU6-1028P-201ENST00000517164 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
RNU6-1028P-201ENST00000517164 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
RNU6-1028P-201ENST00000517164 TSKSQ9UJT2 592 aa10.25□□□□□ -0.77
RNU6-1028P-201ENST00000517164 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
RNU6-1028P-201ENST00000517164 ADGRG1Q9Y653 693 aa10.25□□□□□ -0.77
RNU6-1028P-201ENST00000517164 AMHR2Q16671 573 aa10.24□□□□□ -0.77
RNU6-1028P-201ENST00000517164 PROX2Q3B8N5 592 aa10.24□□□□□ -0.77
RNU6-1028P-201ENST00000517164 KCNH8Q96L42 1107 aa10.24□□□□□ -0.77
RNU6-1028P-201ENST00000517164 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
RNU6-1028P-201ENST00000517164 ARHGAP33O14559 1287 aa10.23□□□□□ -0.77
RNU6-1028P-201ENST00000517164 ZNF687Q8N1G0 1237 aa10.23□□□□□ -0.77
RNU6-1028P-201ENST00000517164 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
RNU6-1028P-201ENST00000517164 TRIM6-TRIM34B2RNG4 842 aa10.22□□□□□ -0.77
RNU6-1028P-201ENST00000517164 METTL3Q86U44 580 aaKnown RBP10.22□□□□□ -0.77
RNU6-1028P-201ENST00000517164 C3orf80F5H4A9 247 aa10.21□□□□□ -0.77
RNU6-1028P-201ENST00000517164 DMRTA1Q5VZB9 504 aa10.21□□□□□ -0.77
RNU6-1028P-201ENST00000517164 PARP9Q8IXQ6 854 aa10.21□□□□□ -0.77
RNU6-1028P-201ENST00000517164 ZBED2Q9BTP6 218 aa10.21□□□□□ -0.77
RNU6-1028P-201ENST00000517164 KDM4CQ9H3R0 1056 aa10.21□□□□□ -0.77
RNU6-1028P-201ENST00000517164 OATP04181 439 aa10.2□□□□□ -0.78
RNU6-1028P-201ENST00000517164 PBX2P40425 430 aa10.2□□□□□ -0.78
RNU6-1028P-201ENST00000517164 PXYLP1Q8TE99 480 aa10.2□□□□□ -0.78
RNU6-1028P-201ENST00000517164 NLRP7Q8WX94 980 aa10.2□□□□□ -0.78
RNU6-1028P-201ENST00000517164 TTLL12Q14166 644 aaPredicted RBP10.19□□□□□ -0.78
RNU6-1028P-201ENST00000517164 NUDT18Q6ZVK8 323 aa10.18□□□□□ -0.78
RNU6-1028P-201ENST00000517164 RBM46Q8TBY0 533 aaKnown RBP10.18□□□□□ -0.78
RNU6-1028P-201ENST00000517164 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
RNU6-1028P-201ENST00000517164 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
RNU6-1028P-201ENST00000517164 PNMA3Q9UL41 463 aa10.17□□□□□ -0.78
RNU6-1028P-201ENST00000517164 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
RNU6-1028P-201ENST00000517164 SMAPO00193 183 aa10.16□□□□□ -0.78
RNU6-1028P-201ENST00000517164 MDM2Q00987 491 aaPredicted RBP10.16□□□□□ -0.78
RNU6-1028P-201ENST00000517164 TATDN2Q93075 761 aa10.16□□□□□ -0.78
RNU6-1028P-201ENST00000517164 EYA1Q99502 592 aa10.16□□□□□ -0.78
RNU6-1028P-201ENST00000517164 KIAA1468Q9P260 1216 aa10.16□□□□□ -0.78
RNU6-1028P-201ENST00000517164 ONECUT3O60422 494 aaPredicted RBP10.15□□□□□ -0.78
RNU6-1028P-201ENST00000517164 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
RNU6-1028P-201ENST00000517164 TMEM132AQ24JP5 1023 aa10.14□□□□□ -0.79
RNU6-1028P-201ENST00000517164 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
RNU6-1028P-201ENST00000517164 SLC4A5Q9BY07 1137 aa10.14□□□□□ -0.79
RNU6-1028P-201ENST00000517164 RCCD1A6NED2 376 aa10.13□□□□□ -0.79
RNU6-1028P-201ENST00000517164 CLCN1P35523 988 aa10.13□□□□□ -0.79
RNU6-1028P-201ENST00000517164 GPCPD1Q9NPB8 672 aa10.13□□□□□ -0.79
RNU6-1028P-201ENST00000517164 VPS9D1Q9Y2B5 631 aa10.13□□□□□ -0.79
RNU6-1028P-201ENST00000517164 RABGEF1Q9UJ41 708 aa10.12□□□□□ -0.79
RNU6-1028P-201ENST00000517164 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.11□□□□□ -0.79
RNU6-1028P-201ENST00000517164 MS4A1P11836 297 aa10.11□□□□□ -0.79
RNU6-1028P-201ENST00000517164 IL27Q8NEV9 243 aa10.11□□□□□ -0.79
RNU6-1028P-201ENST00000517164 FAM117AQ9C073 453 aa10.11□□□□□ -0.79
RNU6-1028P-201ENST00000517164 SEPT9Q9UHD8 586 aaPredicted RBP10.11□□□□□ -0.79
RNU6-1028P-201ENST00000517164 LSM11P83369 360 aaKnown RBP eCLIP10.1□□□□□ -0.79
RNU6-1028P-201ENST00000517164 DNAJB2P25686 324 aa10.09□□□□□ -0.79
RNU6-1028P-201ENST00000517164 FAM217BQ9NTX9 383 aaPredicted RBP10.08□□□□□ -0.8
RNU6-1028P-201ENST00000517164 TK2O00142 265 aa10.07□□□□□ -0.8
RNU6-1028P-201ENST00000517164 SSTR3P32745 418 aaPredicted RBP10.07□□□□□ -0.8
RNU6-1028P-201ENST00000517164 TMEM134Q9H6X4 195 aa10.07□□□□□ -0.8
RNU6-1028P-201ENST00000517164 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
RNU6-1028P-201ENST00000517164 ADGRD1Q6QNK2 874 aa10.06□□□□□ -0.8
RNU6-1028P-201ENST00000517164 DAXXQ9UER7 740 aaPredicted RBP10.06□□□□□ -0.8
RNU6-1028P-201ENST00000517164 BHMG1C9JSJ3 638 aaPredicted RBP10.05□□□□□ -0.8
RNU6-1028P-201ENST00000517164 DDRGK1Q96HY6 314 aa10.05□□□□□ -0.8
RNU6-1028P-201ENST00000517164 ANKRD13DQ6ZTN6 518 aa10.04□□□□□ -0.8
RNU6-1028P-201ENST00000517164 NBPF3Q9H094 633 aa10.04□□□□□ -0.8
RNU6-1028P-201ENST00000517164 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms