RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 DOK7Q18PE1 504 aa4.4□□□□□ -1.71
SCARNA3-201ENST00000517097 ZNF710Q8N1W2 664 aa4.4□□□□□ -1.71
SCARNA3-201ENST00000517097 CLUAP1Q96AJ1 413 aa4.4□□□□□ -1.71
SCARNA3-201ENST00000517097 TRAK2O60296 914 aa4.39□□□□□ -1.71
SCARNA3-201ENST00000517097 MINK1Q8N4C8 1332 aaPredicted RBP4.39□□□□□ -1.71
SCARNA3-201ENST00000517097 AMHR2Q16671 573 aa4.38□□□□□ -1.71
SCARNA3-201ENST00000517097 PARP9Q8IXQ6 854 aa4.38□□□□□ -1.71
SCARNA3-201ENST00000517097 CCDC102AQ96A19 550 aa4.38□□□□□ -1.71
SCARNA3-201ENST00000517097 SPDYE16A6NNV3 312 aaPredicted RBP4.37□□□□□ -1.71
SCARNA3-201ENST00000517097 DPYSL4O14531 572 aa4.37□□□□□ -1.71
SCARNA3-201ENST00000517097 PPP1R15BQ5SWA1 713 aa4.37□□□□□ -1.71
SCARNA3-201ENST00000517097 TRAIPQ9BWF2 469 aa4.37□□□□□ -1.71
SCARNA3-201ENST00000517097 GOPCQ9HD26 462 aa4.37□□□□□ -1.71
SCARNA3-201ENST00000517097 IRF6O14896 467 aa4.36□□□□□ -1.71
SCARNA3-201ENST00000517097 RIMBP2O15034 1052 aa4.36□□□□□ -1.71
SCARNA3-201ENST00000517097 MAP2K5Q13163 448 aa4.36□□□□□ -1.71
SCARNA3-201ENST00000517097 PDIA6Q15084 440 aa4.36□□□□□ -1.71
SCARNA3-201ENST00000517097 VARS2Q5ST30 1063 aaKnown RBP4.36□□□□□ -1.71
SCARNA3-201ENST00000517097 GPR153Q6NV75 609 aa4.36□□□□□ -1.71
SCARNA3-201ENST00000517097 ERBB3P21860 1342 aa4.36□□□□□ -1.71
SCARNA3-201ENST00000517097 KIF3CO14782 793 aa4.35□□□□□ -1.71
SCARNA3-201ENST00000517097 KCTD17Q8N5Z5 321 aa4.35□□□□□ -1.71
SCARNA3-201ENST00000517097 PCMTD1Q96MG8 357 aaPredicted RBP4.35□□□□□ -1.71
SCARNA3-201ENST00000517097 ZSWIM6Q9HCJ5 1215 aa4.35□□□□□ -1.71
SCARNA3-201ENST00000517097 EMILIN3Q9NT22 766 aa4.35□□□□□ -1.71
SCARNA3-201ENST00000517097 NUTM2FA1L443 756 aa4.34□□□□□ -1.71
SCARNA3-201ENST00000517097 MCM6Q14566 821 aa4.34□□□□□ -1.71
SCARNA3-201ENST00000517097 ARSIQ5FYB1 569 aa4.34□□□□□ -1.71
SCARNA3-201ENST00000517097 KHSRPQ92945 711 aaKnown RBP eCLIP4.34□□□□□ -1.71
SCARNA3-201ENST00000517097 ZNF777Q9ULD5 760 aaPredicted RBP4.34□□□□□ -1.71
SCARNA3-201ENST00000517097 C2orf72A6NCS6 295 aa4.33□□□□□ -1.72
SCARNA3-201ENST00000517097 GNPATO15228 680 aa4.33□□□□□ -1.72
SCARNA3-201ENST00000517097 RAD21O60216 631 aa4.33□□□□□ -1.72
SCARNA3-201ENST00000517097 GPHNQ9NQX3 736 aaPredicted RBP4.33□□□□□ -1.72
SCARNA3-201ENST00000517097 GRXCR2A6NFK2 248 aa4.32□□□□□ -1.72
SCARNA3-201ENST00000517097 TTLL12Q14166 644 aaPredicted RBP4.32□□□□□ -1.72
SCARNA3-201ENST00000517097 PROSER2Q86WR7 435 aaPredicted RBP4.32□□□□□ -1.72
SCARNA3-201ENST00000517097 AEBP1Q8IUX7 1158 aa4.32□□□□□ -1.72
SCARNA3-201ENST00000517097 CCDC97Q96F63 343 aaPredicted RBP4.32□□□□□ -1.72
SCARNA3-201ENST00000517097 SERPINA10Q9UK55 444 aa4.32□□□□□ -1.72
SCARNA3-201ENST00000517097 MS4A1P11836 297 aa4.31□□□□□ -1.72
SCARNA3-201ENST00000517097 FECHP22830 423 aa4.31□□□□□ -1.72
SCARNA3-201ENST00000517097 DSG2Q14126 1118 aa4.31□□□□□ -1.72
SCARNA3-201ENST00000517097 HIC1Q14526 733 aa4.31□□□□□ -1.72
SCARNA3-201ENST00000517097 GIGYF2Q6Y7W6 1299 aaKnown RBP4.31□□□□□ -1.72
SCARNA3-201ENST00000517097 ZNF687Q8N1G0 1237 aa4.31□□□□□ -1.72
SCARNA3-201ENST00000517097 FNBP4Q8N3X1 1017 aaPredicted RBP4.31□□□□□ -1.72
SCARNA3-201ENST00000517097 FCHSD2O94868 740 aa4.3□□□□□ -1.72
SCARNA3-201ENST00000517097 RGS22Q8NE09 1264 aa4.3□□□□□ -1.72
SCARNA3-201ENST00000517097 POM121Q96HA1 1249 aa4.3□□□□□ -1.72
SCARNA3-201ENST00000517097 NUDT7P0C024 238 aa4.29□□□□□ -1.72
SCARNA3-201ENST00000517097 SH3D19Q5HYK7 790 aa4.29□□□□□ -1.72
SCARNA3-201ENST00000517097 REPIN1Q9BWE0 567 aaKnown RBP4.29□□□□□ -1.72
SCARNA3-201ENST00000517097 OSBPP22059 807 aa4.28□□□□□ -1.72
SCARNA3-201ENST00000517097 TMCO4Q5TGY1 634 aa4.28□□□□□ -1.72
SCARNA3-201ENST00000517097 RETREG2Q8NC44 543 aa4.28□□□□□ -1.72
SCARNA3-201ENST00000517097 TMC2Q8TDI7 906 aa4.28□□□□□ -1.72
SCARNA3-201ENST00000517097 OXER1Q8TDS5 423 aa4.28□□□□□ -1.72
SCARNA3-201ENST00000517097 PCDHGA4Q9Y5G9 962 aa4.28□□□□□ -1.72
SCARNA3-201ENST00000517097 SLC34A2O95436 690 aa4.27□□□□□ -1.73
SCARNA3-201ENST00000517097 FOXK1P85037 733 aa4.27□□□□□ -1.73
SCARNA3-201ENST00000517097 SKIV2LQ15477 1246 aaKnown RBP4.27□□□□□ -1.73
SCARNA3-201ENST00000517097 RNF166Q96A37 237 aaPredicted RBP4.27□□□□□ -1.73
SCARNA3-201ENST00000517097 GZF1Q9H116 711 aaPredicted RBP4.27□□□□□ -1.73
SCARNA3-201ENST00000517097 LHX6Q9UPM6 363 aa4.27□□□□□ -1.73
SCARNA3-201ENST00000517097 MTMR7Q9Y216 660 aa4.27□□□□□ -1.73
SCARNA3-201ENST00000517097 LOC105371045A0A1W2PR82 267 aa4.26□□□□□ -1.73
SCARNA3-201ENST00000517097 MFAP1P55081 439 aaKnown RBP4.26□□□□□ -1.73
SCARNA3-201ENST00000517097 MAP3K9P80192 1104 aa4.26□□□□□ -1.73
SCARNA3-201ENST00000517097 POTEEQ6S8J3 1075 aa4.26□□□□□ -1.73
SCARNA3-201ENST00000517097 MYT1LQ9UL68 1186 aa4.26□□□□□ -1.73
SCARNA3-201ENST00000517097 SPDYE5A6NIY4 337 aa4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 LSM11P83369 360 aaKnown RBP eCLIP4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 IRF5Q13568 498 aa4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 ANKRD13DQ6ZTN6 518 aa4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 PLPP6Q8IY26 295 aa4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 TMUB1Q9BVT8 246 aa4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 ATP1B4Q9UN42 357 aaPredicted RBP4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 COG6Q9Y2V7 657 aa4.25□□□□□ -1.73
SCARNA3-201ENST00000517097 KDM4FA0A1W2PPD8 638 aa4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 PTGER2P43116 358 aa4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 PTGDRQ13258 359 aa4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 FOXD4L5Q5VV16 416 aaPredicted RBP4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 PROCA1Q8NCQ7 364 aaPredicted RBP4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 FOXD4L4Q8WXT5 416 aaPredicted RBP4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 DDX12PQ92771 950 aa4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 AXIN2Q9Y2T1 843 aa4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 ZNF330Q9Y3S2 320 aaPredicted RBP4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 SHROOM4Q9ULL8 1493 aa4.24□□□□□ -1.73
SCARNA3-201ENST00000517097 PPP1R15AO75807 674 aaPredicted RBP4.23□□□□□ -1.73
SCARNA3-201ENST00000517097 SSTR3P32745 418 aaPredicted RBP4.23□□□□□ -1.73
SCARNA3-201ENST00000517097 CLCN1P35523 988 aa4.23□□□□□ -1.73
SCARNA3-201ENST00000517097 PRIM1P49642 420 aaKnown RBP4.23□□□□□ -1.73
SCARNA3-201ENST00000517097 RBM25P49756 843 aaKnown RBP4.23□□□□□ -1.73
SCARNA3-201ENST00000517097 PBX2P40425 430 aa4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 MDM2Q00987 491 aaPredicted RBP4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 PTCD2Q8WV60 388 aaKnown RBP4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 FBXW7Q969H0 707 aa4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 ZNF428Q96B54 188 aa4.22□□□□□ -1.73
SCARNA3-201ENST00000517097 BEGAINQ9BUH8 593 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms