RNA–Protein interactions for RNA: ENST00000516503.1

RN7SKP21-201, Transcript of RNA, 7SK small nuclear pseudogene 21, humanhuman

BASIC

Gene RN7SKP21, Length 220 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP21-201ENST00000516503 CDC42BPBQ9Y5S2 1711 aa7.61□□□□□ -1.19
RN7SKP21-201ENST00000516503 KIF14Q15058 1648 aa7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 LHX8Q68G74 356 aa7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 FAM9AQ8IZU1 332 aaPredicted RBP7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 ESF1Q9H501 851 aaKnown RBP7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 ZNF219Q9P2Y4 722 aaPredicted RBP7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 CDK13Q14004 1512 aaKnown RBP7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 ITSN2Q9NZM3 1697 aa7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 FAM135BQ49AJ0 1406 aa7.6□□□□□ -1.19
RN7SKP21-201ENST00000516503 PLXNC1O60486 1568 aa7.59□□□□□ -1.19
RN7SKP21-201ENST00000516503 ABCC1P33527 1531 aa7.59□□□□□ -1.19
RN7SKP21-201ENST00000516503 IQGAP1P46940 1657 aa7.58□□□□□ -1.2
RN7SKP21-201ENST00000516503 ZC3H13Q5T200 1668 aaKnown RBP7.58□□□□□ -1.2
RN7SKP21-201ENST00000516503 NPHP4O75161 1426 aaPredicted RBP7.57□□□□□ -1.2
RN7SKP21-201ENST00000516503 ARHGAP5Q13017 1502 aa7.57□□□□□ -1.2
RN7SKP21-201ENST00000516503 PIP4P2Q8N4L2 257 aa7.56□□□□□ -1.2
RN7SKP21-201ENST00000516503 SAMD9LQ8IVG5 1584 aa7.55□□□□□ -1.2
RN7SKP21-201ENST00000516503 CDK12Q9NYV4 1490 aaPredicted RBP7.55□□□□□ -1.2
RN7SKP21-201ENST00000516503 ROBO1Q9Y6N7 1651 aa7.54□□□□□ -1.2
RN7SKP21-201ENST00000516503 PREX2Q70Z35 1606 aa7.54□□□□□ -1.2
RN7SKP21-201ENST00000516503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.54□□□□□ -1.2
RN7SKP21-201ENST00000516503 SETBP1Q9Y6X0 1596 aa7.54□□□□□ -1.2
RN7SKP21-201ENST00000516503 LRP6O75581 1613 aa7.53□□□□□ -1.2
RN7SKP21-201ENST00000516503 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
RN7SKP21-201ENST00000516503 APLP2Q06481 763 aa7.52□□□□□ -1.21
RN7SKP21-201ENST00000516503 INO80Q9ULG1 1556 aaPredicted RBP7.51□□□□□ -1.21
RN7SKP21-201ENST00000516503 TNRQ92752 1358 aa7.51□□□□□ -1.21
RN7SKP21-201ENST00000516503 TROQ12816 1431 aaPredicted RBP7.51□□□□□ -1.21
RN7SKP21-201ENST00000516503 A2MP01023 1474 aa7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 PZPP20742 1482 aa7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 LRRIQ1Q96JM4 1722 aa7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 COL16A1Q07092 1604 aaPredicted RBP7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 TRIM52Q96A61 297 aa7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 MYT1LQ9UL68 1186 aa7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 MAP3K1Q13233 1512 aa7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 UGGT1Q9NYU2 1555 aa7.5□□□□□ -1.21
RN7SKP21-201ENST00000516503 CDC42BPAQ5VT25 1732 aa7.49□□□□□ -1.21
RN7SKP21-201ENST00000516503 ATP7AQ04656 1500 aa7.49□□□□□ -1.21
RN7SKP21-201ENST00000516503 KDM5DQ9BY66 1539 aa7.49□□□□□ -1.21
RN7SKP21-201ENST00000516503 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
RN7SKP21-201ENST00000516503 PHLPP1O60346 1717 aa7.49□□□□□ -1.21
RN7SKP21-201ENST00000516503 NLRP1Q9C000 1473 aa7.49□□□□□ -1.21
RN7SKP21-201ENST00000516503 JCADQ9P266 1359 aa7.48□□□□□ -1.21
RN7SKP21-201ENST00000516503 THEMISQ8N1K5 641 aaPredicted RBP7.48□□□□□ -1.21
RN7SKP21-201ENST00000516503 MIA2Q96PC5 1412 aa7.47□□□□□ -1.21
RN7SKP21-201ENST00000516503 EVX2Q03828 476 aa7.47□□□□□ -1.21
RN7SKP21-201ENST00000516503 ZNF772Q68DY9 489 aaPredicted RBP7.47□□□□□ -1.21
RN7SKP21-201ENST00000516503 ADGBQ8N7X0 1667 aa7.47□□□□□ -1.21
RN7SKP21-201ENST00000516503 FAM135AQ9P2D6 1515 aa7.47□□□□□ -1.21
RN7SKP21-201ENST00000516503 RGS12O14924 1447 aa7.46□□□□□ -1.21
RN7SKP21-201ENST00000516503 LRP5O75197 1615 aa7.46□□□□□ -1.21
RN7SKP21-201ENST00000516503 EP400Q96L91 3159 aa7.46□□□□□ -1.22
RN7SKP21-201ENST00000516503 RXRBP28702 533 aa7.46□□□□□ -1.22
RN7SKP21-201ENST00000516503 GGT6Q6P531 493 aa7.46□□□□□ -1.22
RN7SKP21-201ENST00000516503 LRRC9Q6ZRR7 1453 aa7.46□□□□□ -1.22
RN7SKP21-201ENST00000516503 SHPRHQ149N8 1683 aa7.46□□□□□ -1.22
RN7SKP21-201ENST00000516503 FGD6Q6ZV73 1430 aa7.45□□□□□ -1.22
RN7SKP21-201ENST00000516503 SYCP2Q9BX26 1530 aa7.45□□□□□ -1.22
RN7SKP21-201ENST00000516503 SPATA31A6Q5VVP1 1343 aa7.45□□□□□ -1.22
RN7SKP21-201ENST00000516503 UBR1Q8IWV7 1749 aa7.44□□□□□ -1.22
RN7SKP21-201ENST00000516503 ARHGAP23Q9P227 1491 aa7.44□□□□□ -1.22
RN7SKP21-201ENST00000516503 SPAG9O60271 1321 aaKnown RBP7.44□□□□□ -1.22
RN7SKP21-201ENST00000516503 TMEM94Q12767 1356 aa7.44□□□□□ -1.22
RN7SKP21-201ENST00000516503 DIP2AQ14689 1571 aa7.43□□□□□ -1.22
RN7SKP21-201ENST00000516503 AKT1S1Q96B36 256 aa7.43□□□□□ -1.22
RN7SKP21-201ENST00000516503 CLIP1P30622 1438 aa7.43□□□□□ -1.22
RN7SKP21-201ENST00000516503 KIAA1107Q9UPP5 1409 aa7.43□□□□□ -1.22
RN7SKP21-201ENST00000516503 NCOA2Q15596 1464 aa7.43□□□□□ -1.22
RN7SKP21-201ENST00000516503 SLIT1O75093 1534 aa7.42□□□□□ -1.22
RN7SKP21-201ENST00000516503 NCBP3Q53F19 620 aaKnown RBP7.42□□□□□ -1.22
RN7SKP21-201ENST00000516503 IFFO2Q5TF58 517 aa7.42□□□□□ -1.22
RN7SKP21-201ENST00000516503 ZRANB1Q9UGI0 708 aa7.42□□□□□ -1.22
RN7SKP21-201ENST00000516503 CDK11AQ9UQ88 783 aaPredicted RBP7.42□□□□□ -1.22
RN7SKP21-201ENST00000516503 SCAF11Q99590 1463 aaKnown RBP7.42□□□□□ -1.22
RN7SKP21-201ENST00000516503 TIAM1Q13009 1591 aa7.42□□□□□ -1.22
RN7SKP21-201ENST00000516503 LTKP29376 864 aa7.41□□□□□ -1.22
RN7SKP21-201ENST00000516503 PRDM15P57071 1507 aaPredicted RBP7.41□□□□□ -1.22
RN7SKP21-201ENST00000516503 NWD1Q149M9 1564 aa7.41□□□□□ -1.22
RN7SKP21-201ENST00000516503 AHDC1Q5TGY3 1603 aaPredicted RBP7.41□□□□□ -1.22
RN7SKP21-201ENST00000516503 HNRNPMP52272 730 aaKnown RBP eCLIP7.4□□□□□ -1.22
RN7SKP21-201ENST00000516503 GPATCH8Q9UKJ3 1502 aaKnown RBP7.4□□□□□ -1.22
RN7SKP21-201ENST00000516503 TET3O43151 1660 aa7.4□□□□□ -1.23
RN7SKP21-201ENST00000516503 FMN1Q68DA7 1419 aa7.39□□□□□ -1.23
RN7SKP21-201ENST00000516503 DHX29Q7Z478 1369 aaKnown RBP7.39□□□□□ -1.23
RN7SKP21-201ENST00000516503 FXR2P51116 673 aaKnown RBP eCLIP7.39□□□□□ -1.23
RN7SKP21-201ENST00000516503 RBM33Q96EV2 1170 aaKnown RBP7.39□□□□□ -1.23
RN7SKP21-201ENST00000516503 SLAIN2Q9P270 581 aa7.39□□□□□ -1.23
RN7SKP21-201ENST00000516503 ABCC3O15438 1527 aa7.38□□□□□ -1.23
RN7SKP21-201ENST00000516503 CAMSAP2Q08AD1 1489 aa7.38□□□□□ -1.23
RN7SKP21-201ENST00000516503 RANGAP1P46060 587 aaPredicted RBP7.38□□□□□ -1.23
RN7SKP21-201ENST00000516503 CSRNP3Q8WYN3 585 aa7.38□□□□□ -1.23
RN7SKP21-201ENST00000516503 KDM5AP29375 1690 aaKnown RBP7.38□□□□□ -1.23
RN7SKP21-201ENST00000516503 RTEL1-TNFRSF6BF6WH68 1400 aa7.37□□□□□ -1.23
RN7SKP21-201ENST00000516503 ATAD2Q6PL18 1390 aa7.37□□□□□ -1.23
RN7SKP21-201ENST00000516503 AFF2P51816 1311 aa7.37□□□□□ -1.23
RN7SKP21-201ENST00000516503 KCNA6P17658 529 aa7.37□□□□□ -1.23
RN7SKP21-201ENST00000516503 RBM6P78332 1123 aaKnown RBP7.37□□□□□ -1.23
RN7SKP21-201ENST00000516503 NHSL1Q5SYE7 1610 aa7.37□□□□□ -1.23
RN7SKP21-201ENST00000516503 NKTRP30414 1462 aaKnown RBP7.36□□□□□ -1.23
RN7SKP21-201ENST00000516503 ERVK-7P63135 1459 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms