RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
SMAD1-215ENST00000515385 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.57■□□□□ 0.24
SMAD1-215ENST00000515385 CDCA7LQ96GN5 454 aa16.56■□□□□ 0.24
SMAD1-215ENST00000515385 DAPK1P53355 1430 aa16.55■□□□□ 0.24
SMAD1-215ENST00000515385 PDE4CQ08493 712 aa16.55■□□□□ 0.24
SMAD1-215ENST00000515385 AAMPQ13685 434 aa16.55■□□□□ 0.24
SMAD1-215ENST00000515385 SKAP1Q86WV1 359 aa16.55■□□□□ 0.24
SMAD1-215ENST00000515385 GOLGA6L3A6NEY3 463 aa16.54■□□□□ 0.24
SMAD1-215ENST00000515385 KIAA1107Q9UPP5 1409 aa16.54■□□□□ 0.24
SMAD1-215ENST00000515385 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
SMAD1-215ENST00000515385 PZPP20742 1482 aa16.52■□□□□ 0.24
SMAD1-215ENST00000515385 GAPVD1Q14C86 1478 aa16.52■□□□□ 0.24
SMAD1-215ENST00000515385 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.24
SMAD1-215ENST00000515385 ARHGEF12Q9NZN5 1544 aa16.52■□□□□ 0.23
SMAD1-215ENST00000515385 EIF3AQ14152 1382 aaKnown RBP16.51■□□□□ 0.23
SMAD1-215ENST00000515385 CARD11Q9BXL7 1154 aa16.5■□□□□ 0.23
SMAD1-215ENST00000515385 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
SMAD1-215ENST00000515385 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
SMAD1-215ENST00000515385 ABCC5O15440 1437 aa16.49■□□□□ 0.23
SMAD1-215ENST00000515385 XRCC6P12956 609 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMAD1-215ENST00000515385 ISY1Q9ULR0 285 aaKnown RBP16.49■□□□□ 0.23
SMAD1-215ENST00000515385 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
SMAD1-215ENST00000515385 VIRMAQ69YN4 1812 aaKnown RBP16.48■□□□□ 0.23
SMAD1-215ENST00000515385 TPM2P07951 284 aa16.48■□□□□ 0.23
SMAD1-215ENST00000515385 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
SMAD1-215ENST00000515385 ANTXR1Q9H6X2 564 aa16.47■□□□□ 0.23
SMAD1-215ENST00000515385 USP19O94966 1318 aa16.47■□□□□ 0.23
SMAD1-215ENST00000515385 MRE11P49959 708 aa16.46■□□□□ 0.23
SMAD1-215ENST00000515385 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
SMAD1-215ENST00000515385 MAPK8IP3Q9UPT6 1336 aa16.46■□□□□ 0.23
SMAD1-215ENST00000515385 EPRSP07814 1512 aaKnown RBP16.46■□□□□ 0.23
SMAD1-215ENST00000515385 NESP48681 1621 aa16.45■□□□□ 0.22
SMAD1-215ENST00000515385 RGS3P49796 1198 aa16.45■□□□□ 0.22
SMAD1-215ENST00000515385 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
SMAD1-215ENST00000515385 PDIA4P13667 645 aaKnown RBP16.44■□□□□ 0.22
SMAD1-215ENST00000515385 PDCL3Q9H2J4 239 aa16.44■□□□□ 0.22
SMAD1-215ENST00000515385 RAD54L2Q9Y4B4 1467 aa16.43■□□□□ 0.22
SMAD1-215ENST00000515385 ZMYM3Q14202 1370 aa16.43■□□□□ 0.22
SMAD1-215ENST00000515385 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
SMAD1-215ENST00000515385 CCDC144AA2RUR9 1427 aa16.42■□□□□ 0.22
SMAD1-215ENST00000515385 PER1O15534 1290 aaPredicted RBP16.41■□□□□ 0.22
SMAD1-215ENST00000515385 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
SMAD1-215ENST00000515385 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
SMAD1-215ENST00000515385 ESPNB1AK53 854 aa16.4■□□□□ 0.22
SMAD1-215ENST00000515385 MCM4P33991 863 aa16.4■□□□□ 0.22
SMAD1-215ENST00000515385 SLKQ9H2G2 1235 aaPredicted RBP16.39■□□□□ 0.21
SMAD1-215ENST00000515385 ZNF608Q9ULD9 1512 aaPredicted RBP16.39■□□□□ 0.21
SMAD1-215ENST00000515385 MYH16Q9H6N6 1097 aa16.39■□□□□ 0.21
SMAD1-215ENST00000515385 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
SMAD1-215ENST00000515385 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
SMAD1-215ENST00000515385 PKD2Q13563 968 aa16.38■□□□□ 0.21
SMAD1-215ENST00000515385 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
SMAD1-215ENST00000515385 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
SMAD1-215ENST00000515385 GOLGA2Q08379 1002 aa16.37■□□□□ 0.21
SMAD1-215ENST00000515385 ADGRL2O95490 1459 aa16.36■□□□□ 0.21
SMAD1-215ENST00000515385 NLRP1Q9C000 1473 aa16.36■□□□□ 0.21
SMAD1-215ENST00000515385 ZNF521Q96K83 1311 aa16.36■□□□□ 0.21
SMAD1-215ENST00000515385 NINLQ9Y2I6 1382 aa16.36■□□□□ 0.21
SMAD1-215ENST00000515385 A0A0U1RQG5 324 aaPredicted RBP16.36■□□□□ 0.21
SMAD1-215ENST00000515385 ADGBQ8N7X0 1667 aa16.36■□□□□ 0.21
SMAD1-215ENST00000515385 PANK2Q9BZ23 570 aa16.34■□□□□ 0.21
SMAD1-215ENST00000515385 CGNL1Q0VF96 1302 aa16.34■□□□□ 0.21
SMAD1-215ENST00000515385 TBC1D32Q96NH3 1257 aa16.34■□□□□ 0.21
SMAD1-215ENST00000515385 GRPEL1Q9HAV7 217 aa16.34■□□□□ 0.21
SMAD1-215ENST00000515385 CHMP5Q9NZZ3 219 aa16.34■□□□□ 0.21
SMAD1-215ENST00000515385 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.21
SMAD1-215ENST00000515385 TRAK2O60296 914 aa16.33■□□□□ 0.21
SMAD1-215ENST00000515385 TRIM44Q96DX7 344 aaPredicted RBP16.33■□□□□ 0.21
SMAD1-215ENST00000515385 WDR62O43379 1518 aa16.33■□□□□ 0.2
SMAD1-215ENST00000515385 TERF1P54274 439 aa16.32■□□□□ 0.2
SMAD1-215ENST00000515385 SLFN5Q08AF3 891 aa16.32■□□□□ 0.2
SMAD1-215ENST00000515385 TRMT2AQ8IZ69 625 aaKnown RBP16.32■□□□□ 0.2
SMAD1-215ENST00000515385 TBC1D2Q9BYX2 928 aa16.32■□□□□ 0.2
SMAD1-215ENST00000515385 ANKRD30AQ9BXX3 1397 aa16.32■□□□□ 0.2
SMAD1-215ENST00000515385 CDK13Q14004 1512 aaKnown RBP16.32■□□□□ 0.2
SMAD1-215ENST00000515385 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
SMAD1-215ENST00000515385 MAP7D2Q96T17 732 aa16.31■□□□□ 0.2
SMAD1-215ENST00000515385 PLEKHH1Q9ULM0 1364 aa16.31■□□□□ 0.2
SMAD1-215ENST00000515385 COL17A1Q9UMD9 1497 aaPredicted RBP16.31■□□□□ 0.2
SMAD1-215ENST00000515385 KIAA0586Q9BVV6 1533 aa16.31■□□□□ 0.2
SMAD1-215ENST00000515385 SEC24BO95487 1268 aa16.3■□□□□ 0.2
SMAD1-215ENST00000515385 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
SMAD1-215ENST00000515385 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMAD1-215ENST00000515385 PTMSP20962 102 aa16.29■□□□□ 0.2
SMAD1-215ENST00000515385 CEP170Q5SW79 1584 aa16.29■□□□□ 0.2
SMAD1-215ENST00000515385 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
SMAD1-215ENST00000515385 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
SMAD1-215ENST00000515385 IGHDP01880 384 aa16.28■□□□□ 0.2
SMAD1-215ENST00000515385 CC2D1BQ5T0F9 858 aaKnown RBP16.28■□□□□ 0.2
SMAD1-215ENST00000515385 LAMC1P11047 1609 aa16.28■□□□□ 0.2
SMAD1-215ENST00000515385 KDM5DQ9BY66 1539 aa16.27■□□□□ 0.2
SMAD1-215ENST00000515385 GPRASP1Q5JY77 1395 aa16.27■□□□□ 0.19
SMAD1-215ENST00000515385 ARXQ96QS3 562 aa16.26■□□□□ 0.19
SMAD1-215ENST00000515385 GZF1Q9H116 711 aaPredicted RBP16.26■□□□□ 0.19
SMAD1-215ENST00000515385 PMFBP1Q8TBY8 1022 aa16.26■□□□□ 0.19
SMAD1-215ENST00000515385 CLUAP1Q96AJ1 413 aa16.26■□□□□ 0.19
SMAD1-215ENST00000515385 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
SMAD1-215ENST00000515385 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
SMAD1-215ENST00000515385 PRDM4Q9UKN5 801 aa16.25■□□□□ 0.19
SMAD1-215ENST00000515385 ZNF644Q9H582 1327 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms